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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX67813
CDX68224
CDX71876
CDX77690
CDX79256
CDX79596
CDX79952
CDX82067
CDX84225
CDX84616
CDX87454
CDX87678
CDX88437
CDX89033
CDX89034
CDX90141
CDX94599
CDX96246
CDX96247
CDX98395
CDY05979
CDY05980
CDY11103
CDY14349
CDY14617
CDY15683
CDY22506
CDY23869
CDY26860
CDY31674
CDY35426
CDY35728
CDY37148
CDY45782
CDY58504
CDY65903
CDY71921

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G59790.1 CDX90141 AT1G28280.1 24750137
AT3G59790.1 CDX94599 AT1G28280.1 24750137
AT3G59790.1 CDY15683 AT1G28280.1 24750137
AT3G59790.1 CDY35728 AT1G28280.1 24750137
AT3G59790.1 CDX68224 AT1G73500.1 19513235
AT3G59790.1 CDX82067 AT1G73500.1 19513235
AT3G59790.1 CDY11103 AT1G73500.1 19513235
AT3G59790.1 CDY71921 AT1G73500.1 19513235
AT3G59790.1 CDX79256 AT1G78310.1 24750137
AT3G59790.1 CDX87454 AT1G78310.1 24750137
AT3G59790.1 CDX88437 AT1G78310.1 24750137
AT3G59790.1 CDY14617 AT1G78310.1 24750137
AT3G59790.1 CDY26860 AT1G78310.1 24750137
AT3G59790.1 CDX79596 AT2G35230.1 24750137
AT3G59790.1 CDX84225 AT2G35230.1 24750137
AT3G59790.1 CDX84616 AT2G35230.1 24750137
AT3G59790.1 CDY31674 AT2G35230.1 24750137
AT3G59790.1 CDX79952 AT2G41180.1 24750137
AT3G59790.1 CDY22506 AT2G41180.1 24750137
AT3G59790.1 CDY23869 AT2G41180.1 24750137
AT3G59790.1 CDY35426 AT2G41180.1 24750137
AT3G59790.1 CDX67813 AT3G59790.1 19513235
AT3G59790.1 CDX71876 AT3G59790.1 19513235
AT3G59790.1 CDX89033 AT3G59790.1 19513235
AT3G59790.1 CDX89034 AT3G59790.1 19513235
AT3G59790.1 CDX98395 AT3G59790.1 19513235
AT3G59790.1 CDY05979 AT3G59790.1 19513235
AT3G59790.1 CDY05980 AT3G59790.1 19513235
AT3G59790.1 CDY45782 AT3G59790.1 19513235
AT3G59790.1 CDX77690 AT5G46780.1 24750137
AT3G59790.1 CDX87678 AT5G46780.1 24750137
AT3G59790.1 CDY37148 AT5G46780.1 24750137
AT3G59790.1 CDY58504 AT5G46780.1 24750137
AT3G59790.1 CDX96246 AT5G53830.1 24750137
AT3G59790.1 CDX96247 AT5G53830.1 24750137
AT3G59790.1 CDY14349 AT5G53830.1 24750137
AT3G59790.1 CDY65903 AT5G53830.1 24750137
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY05979 Canola cytosol 92.98 92.75
Bra007476.1-P Field mustard cytosol 91.73 91.5
CDY05980 Canola cytosol 79.7 81.75
CDY45782 Canola cytosol 63.16 64.45
CDX89034 Canola cytosol 62.66 63.45
CDX89033 Canola cytosol 60.9 62.31
KRH71277 Soybean nucleus 60.4 61.64
HORVU7Hr1G023760.2 Barley cytosol 56.64 61.58
GSMUA_Achr5P06640_001 Banana cytosol 58.4 60.99
GSMUA_Achr2P19320_001 Banana cytosol 57.89 60.95
GSMUA_Achr10P... Banana cytosol 58.15 60.73
Solyc08g014420.2.1 Tomato cytosol 59.4 60.15
Solyc12g019460.1.1 Tomato cytosol 59.4 59.85
CDY17911 Canola cytosol 58.65 59.69
AT3G59790.1 Thale cress cytosol 58.65 59.54
CDX79801 Canola cytosol 58.4 59.44
VIT_05s0094g00900.t01 Wine grape cytosol 59.15 59.3
CDX83459 Canola cytosol 58.65 59.24
CDY44256 Canola cytosol 58.4 58.99
CDX99153 Canola cytosol 49.12 58.86
Zm00001d036215_P003 Maize cytosol, extracellular 57.89 58.04
Os06t0154500-01 Rice plasma membrane 57.89 58.04
TraesCS7B01G009200.1 Wheat nucleus 56.89 57.76
EER89222 Sorghum cytosol 58.15 57.71
TraesCS7A01G111300.1 Wheat golgi 56.89 57.32
Zm00001d045310_P003 Maize cytosol 57.14 57.29
TraesCS7D01G106400.1 Wheat cytosol 56.39 57.25
CDX86029 Canola cytosol 52.88 57.03
CDY13253 Canola cytosol 52.88 56.57
CDX67813 Canola cytosol 63.91 56.54
CDX74352 Canola cytosol 51.88 55.5
CDX91889 Canola cytosol 51.88 55.5
KRH50176 Soybean cytosol, nucleus 60.15 55.43
CDY37087 Canola cytosol 49.87 55.28
CDY27334 Canola cytosol 49.62 55.0
CDY06283 Canola cytosol 50.88 54.72
CDY22716 Canola cytosol 50.88 54.72
CDX74788 Canola cytosol 49.12 54.44
CDY18876 Canola cytosol 49.12 54.44
CDX98395 Canola cytosol 63.91 53.91
CDY46308 Canola cytosol 43.11 46.74
CDY44551 Canola cytosol 43.11 46.49
CDX93447 Canola cytosol 42.61 46.07
CDY45885 Canola cytosol 42.61 45.95
CDX86793 Canola cytosol 53.88 45.94
CDX94915 Canola cytosol 42.36 45.8
CDY53276 Canola cytosol 42.86 40.91
CDX92058 Canola cytosol 30.83 40.59
CDY30325 Canola endoplasmic reticulum, plasma membrane 42.86 36.54
CDY17674 Canola cytosol 41.6 34.09
CDX77826 Canola cytosol 41.6 34.09
CDY40377 Canola cytosol 41.6 34.02
CDY41084 Canola cytosol 41.35 33.88
CDX83865 Canola cytosol 24.06 33.57
CDY66706 Canola cytosol 42.61 30.41
CDX70861 Canola cytosol 42.36 30.23
CDY13942 Canola cytosol 42.11 30.0
CDX92566 Canola cytosol 42.11 29.95
CDY63829 Canola peroxisome 41.35 28.9
CDY26184 Canola cytosol 41.6 28.57
CDX68218 Canola mitochondrion 41.1 28.47
CDY60775 Canola cytosol 41.6 28.42
CDX81862 Canola cytosol 41.35 28.4
CDY21718 Canola cytosol 41.1 28.37
CDY25849 Canola cytosol 40.1 28.32
CDY11098 Canola mitochondrion 40.85 28.25
CDY49620 Canola cytosol, nucleus 41.85 28.21
CDY60212 Canola cytosol 39.6 28.16
CDX92190 Canola plastid 41.85 28.11
CDY24091 Canola cytosol 41.1 27.94
CDX97596 Canola cytosol 41.1 27.66
CDY45117 Canola cytosol 40.6 27.36
CDX79842 Canola cytosol 42.11 27.23
CDX98489 Canola cytosol 40.85 27.21
CDY20079 Canola cytosol 41.1 27.2
CDY32347 Canola cytosol 40.85 27.03
CDX83515 Canola cytosol 41.35 25.58
CDY60195 Canola cytosol 42.11 25.57
CDY42817 Canola cytosol 41.1 25.55
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.3.6Gene3D:3.30.200.20GO:A0A078C4E3EnsemblPlants:CDX71876ProteinID:CDX71876
ProteinID:CDX71876.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488
GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00155612001InterPro:IPR000719InterPro:Kinase-like_dom_sf
PFAM:PF00069ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR24055PANTHER:PTHR24055:SF214
InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI0004EDE8E6
Description
BnaC08g29980D
Coordinates
chrLK031795:-:962417..964746
Molecular Weight (calculated)
45703.5 Da
IEP (calculated)
5.801
GRAVY (calculated)
-0.370
Length
399 amino acids
Sequence
(BLAST)
001: MEPPNDAEPG KTDAGATTDL QPHPPPQNSY MNLSHDGRYR QYNLSGTIFE VTAKYKPLIM LLGRGASGIV WSAINSETNE KVAIKKITHA CRNQSTAMRT
101: LREITLLRQL QHENIVGIKD VVLPPQRDAF ENVYIAYELM DTDLHKVINS NPELTDYHHQ YFMYQLLRGL KYIHSANVLH RDLKPSNILL NANGELKICD
201: LGLARVASDA MTEYVGTRWY RAPELLLNSS AYTSAIDVWS VGCIFFQMLT RTPLFPGRDR DNQIRLILEL IGSPTEDDIG SLNESAKQYL RTFPRFDRQS
301: FFVKFREVSF SALSLLEKML KFDPRKRISV EDALADPYIQ TMQNYISYEP VCTNLIDFDS EEHPLTVKQI KELIYDEALA FNHDFLAFNP EPATVEKEQ
Best Arabidopsis Sequence Match ( AT2G43790.1 )
(BLAST)
001: MDGGSGQPAA DTEMTEAPGG FPAAAPSPQM PGIENIPATL SHGGRFIQYN IFGNIFEVTA KYKPPIMPIG KGAYGIVCSA MNSETNESVA IKKIANAFDN
101: KIDAKRTLRE IKLLRHMDHE NIVAIRDIIP PPLRNAFNDV YIAYELMDTD LHQIIRSNQA LSEEHCQYFL YQILRGLKYI HSANVLHRDL KPSNLLLNAN
201: CDLKICDFGL ARVTSESDFM TEYVVTRWYR APELLLNSSD YTAAIDVWSV GCIFMELMDR KPLFPGRDHV HQLRLLMELI GTPSEEELEF LNENAKRYIR
301: QLPPYPRQSI TDKFPTVHPL AIDLIEKMLT FDPRRRITVL DALAHPYLNS LHDISDEPEC TIPFNFDFEN HALSEEQMKE LIYREALAFN PEYQQ
Arabidopsis Description
MPK6Mitogen-activated protein kinase [Source:UniProtKB/TrEMBL;Acc:A0A178VTX8]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.