Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G327500.1 | Wheat | mitochondrion | 78.59 | 98.33 |
| TraesCS6D01G307100.1 | Wheat | cytosol | 95.41 | 95.41 |
| HORVU6Hr1G079810.1 | Barley | mitochondrion | 91.4 | 90.53 |
| OQU85800 | Sorghum | mitochondrion | 70.36 | 70.91 |
| Zm00001d052147_P001 | Maize | cytosol | 68.64 | 68.38 |
| PGSC0003DMT400067237 | Potato | cytosol | 33.84 | 60.82 |
| Bra039693.1-P | Field mustard | cytosol | 30.78 | 58.76 |
| VIT_12s0142g00700.t01 | Wine grape | cytosol | 28.49 | 56.44 |
| CDY36607 | Canola | cytosol | 32.5 | 51.67 |
| VIT_12s0034g00750.t01 | Wine grape | cytosol | 30.59 | 51.12 |
| CDY24072 | Canola | cytosol | 34.42 | 50.56 |
| KRH10459 | Soybean | cytosol | 41.87 | 49.77 |
| CDY18020 | Canola | cytosol | 7.07 | 47.44 |
| KRH42244 | Soybean | cytosol | 39.01 | 43.4 |
| VIT_12s0034g00240.t01 | Wine grape | nucleus | 34.99 | 43.36 |
| KRH53173 | Soybean | nucleus | 45.32 | 42.7 |
| GSMUA_Achr10P... | Banana | cytosol | 45.7 | 42.3 |
| KRH64744 | Soybean | nucleus | 45.32 | 41.87 |
| KRH58364 | Soybean | cytosol, plastid | 39.96 | 41.8 |
| VIT_18s0001g03960.t01 | Wine grape | mitochondrion, nucleus | 44.55 | 41.09 |
| Bra000647.1-P | Field mustard | cytosol | 42.26 | 40.85 |
| CDY34000 | Canola | cytosol | 42.45 | 40.36 |
| CDY69517 | Canola | cytosol | 42.26 | 40.26 |
| TraesCS4B01G216700.1 | Wheat | cytosol, plastid | 44.74 | 39.59 |
| KRH16614 | Soybean | mitochondrion | 41.11 | 38.88 |
| KRH16616 | Soybean | nucleus | 43.21 | 38.31 |
| KRH18819 | Soybean | nucleus | 43.02 | 37.88 |
| Solyc07g053170.2.1 | Tomato | cytosol | 43.02 | 37.44 |
| CDY36198 | Canola | cytosol | 40.92 | 37.22 |
| AT4G08500.1 | Thale cress | cytosol, mitochondrion | 42.83 | 36.84 |
| TraesCS4B01G041600.1 | Wheat | plastid | 46.08 | 36.19 |
| Bra037860.1-P | Field mustard | cytosol | 40.92 | 35.73 |
| TraesCS6B01G232400.1 | Wheat | cytosol | 10.13 | 35.57 |
| KRH10458 | Soybean | cytosol | 31.93 | 35.38 |
| PGSC0003DMT400061014 | Potato | mitochondrion | 44.93 | 35.29 |
| CDX75154 | Canola | cytosol | 40.73 | 35.21 |
| Solyc01g104530.2.1 | Tomato | nucleus | 44.74 | 35.19 |
| AT4G08470.1 | Thale cress | cytosol | 34.42 | 32.14 |
| TraesCS5B01G476300.1 | Wheat | mitochondrion | 10.71 | 30.11 |
| TraesCS1B01G137500.1 | Wheat | plastid | 18.93 | 28.37 |
| AT4G08480.1 | Thale cress | cytosol, plastid | 41.49 | 28.07 |
| CDY18021 | Canola | nucleus | 20.46 | 26.1 |
| TraesCS3B01G289400.1 | Wheat | mitochondrion | 17.4 | 25.49 |
| TraesCS3B01G288300.1 | Wheat | mitochondrion | 16.25 | 23.22 |
| TraesCS1B01G385200.1 | Wheat | mitochondrion | 18.16 | 21.79 |
| TraesCS1B01G385300.1 | Wheat | mitochondrion | 18.16 | 21.64 |
| TraesCS1B01G385100.1 | Wheat | mitochondrion | 18.74 | 20.94 |
| TraesCS1B01G385000.1 | Wheat | mitochondrion | 18.16 | 20.74 |
| TraesCS3B01G289500.1 | Wheat | plastid | 18.74 | 20.72 |
| TraesCS3B01G288100.1 | Wheat | mitochondrion | 18.74 | 20.55 |
| TraesCS4B01G193700.1 | Wheat | mitochondrion | 18.93 | 20.2 |
| TraesCS1B01G384900.1 | Wheat | cytosol, mitochondrion, plastid | 17.02 | 19.91 |
| TraesCS4B01G104900.1 | Wheat | cytosol, mitochondrion, nucleus | 25.24 | 19.91 |
| TraesCS6B01G279300.1 | Wheat | cytosol | 29.64 | 19.72 |
| TraesCS5B01G199400.1 | Wheat | cytosol | 24.86 | 19.12 |
| TraesCS2B01G323700.2 | Wheat | mitochondrion | 24.86 | 18.87 |
| TraesCS7B01G247800.1 | Wheat | plastid | 16.63 | 18.09 |
| TraesCS2B01G277400.3 | Wheat | mitochondrion | 26.58 | 18.08 |
| TraesCS1B01G384700.1 | Wheat | cytosol | 17.4 | 17.33 |
| TraesCS2B01G425500.2 | Wheat | nucleus | 28.3 | 16.65 |
| TraesCS2B01G526200.3 | Wheat | cytosol | 20.65 | 8.16 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.2.2 | Gene3D:3.30.200.20 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 |
| InterPro:Kinase-like_dom_sf | PFAM:PF00069 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR24361 |
| PANTHER:PTHR24361:SF489 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS |
| EnsemblPlantsGene:TraesCS6B01G358800 | EnsemblPlants:TraesCS6B01G358800.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr6B:-:626887113..626892443
Molecular Weight (calculated)
56885.2 Da
IEP (calculated)
6.746
GRAVY (calculated)
-0.371
Length
523 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTPQRPRPR QLARTNAMRN SSYSADAGAD GDDDLAAYGR IQLSVDRAAR ASPGAGARYA SQTSFRIHGG RGGGEEVAEL FRQLGLSGPE DFAIPPAVYA
101: AANAARRRAS LEESAPAASP SEVPEISGRD VIVASRLQPA GDGEEAGLAT ELVQSETIQV SAKAYQRPWA ESKAILVESE RVETSTREVT AVSEPANAGE
201: GKGNGKLAKV ETSREERTRE VVVEATREKA TGALALVVAE SNSCDIEHLV SPSPNRRFRR TITSWIKGEH IGSGSFGSVY EAISDDGFFF AVKEVSLLDQ
301: GINAKQRIVQ LEHEVSLLSR LEHDNIVQYY GTDKEDGKLY IFLELVTQGS LAALYQKYCL QDSQVSAYTR QILNGLNYLH QRNVLHRDIK CANILVDANG
401: LVKLADFGLA KEMSILSQAR SSKGTVFWMA PEVAKAKPHG PPADIWSLGC TVLEMLTGKV PYPDMEWTHA LLKIGRGIPP KIPNTLSEDA RDFIAKCVQA
501: NQKDRPSAAQ LLEHPFVKRP LQH
101: AANAARRRAS LEESAPAASP SEVPEISGRD VIVASRLQPA GDGEEAGLAT ELVQSETIQV SAKAYQRPWA ESKAILVESE RVETSTREVT AVSEPANAGE
201: GKGNGKLAKV ETSREERTRE VVVEATREKA TGALALVVAE SNSCDIEHLV SPSPNRRFRR TITSWIKGEH IGSGSFGSVY EAISDDGFFF AVKEVSLLDQ
301: GINAKQRIVQ LEHEVSLLSR LEHDNIVQYY GTDKEDGKLY IFLELVTQGS LAALYQKYCL QDSQVSAYTR QILNGLNYLH QRNVLHRDIK CANILVDANG
401: LVKLADFGLA KEMSILSQAR SSKGTVFWMA PEVAKAKPHG PPADIWSLGC TVLEMLTGKV PYPDMEWTHA LLKIGRGIPP KIPNTLSEDA RDFIAKCVQA
501: NQKDRPSAAQ LLEHPFVKRP LQH
001: MDVTAIFAGD ILVQSREYLI PNDVVDVDGG IKAVRPPIIQ PPPGRKLPLI DFPGSSWDFL TYFAPSKTVK RQSSSSSDNT SDKEEVETEE TRGMFVQLGD
101: TAHEACPFAT NEADSSSTVS IISPSYASRG SIVPSWLKRK FLGRVSLGFV YEGSSGSSVG SESTCSLMTP SLEFPDRISF RKKDFSEKGP SRHVWEKRKL
201: TRAKLIENFC NPEDIEPVTS WLKGQLLGEE SFASVYEAIS DSSVGSESTC SLMTPSMEFP DRISFRKRDF SEEGPSGRVK EKRKLMRNKL IENFRKPEDI
301: TSWLKGQLLG RGSYASVYEA ISEDGDFFAV KEVSLLDKGI QAQECIQQLE GEIALLSQLQ HQNIVRYRGT AKDVSKLYIF LELVTQGSVQ KLYERYQLSY
401: TVVSLYTRQI LAGLNYLHDK GFVHRDIKCA NMLVDANGTV KLADFGLAEA SKFNDIMSCK GTLFWMAPEV INRKDSDGNG SPADIWSLGC TVLEMCTGQI
501: PYSDLKPIQA AFKIGRGTLP DVPDTLSLDA RHFILTCLKV NPEERPTAAE LLHHPFVINL
101: TAHEACPFAT NEADSSSTVS IISPSYASRG SIVPSWLKRK FLGRVSLGFV YEGSSGSSVG SESTCSLMTP SLEFPDRISF RKKDFSEKGP SRHVWEKRKL
201: TRAKLIENFC NPEDIEPVTS WLKGQLLGEE SFASVYEAIS DSSVGSESTC SLMTPSMEFP DRISFRKRDF SEEGPSGRVK EKRKLMRNKL IENFRKPEDI
301: TSWLKGQLLG RGSYASVYEA ISEDGDFFAV KEVSLLDKGI QAQECIQQLE GEIALLSQLQ HQNIVRYRGT AKDVSKLYIF LELVTQGSVQ KLYERYQLSY
401: TVVSLYTRQI LAGLNYLHDK GFVHRDIKCA NMLVDANGTV KLADFGLAEA SKFNDIMSCK GTLFWMAPEV INRKDSDGNG SPADIWSLGC TVLEMCTGQI
501: PYSDLKPIQA AFKIGRGTLP DVPDTLSLDA RHFILTCLKV NPEERPTAAE LLHHPFVINL
Arabidopsis Description
MAPKKK10Mitogen-activated protein kinase kinase kinase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0T3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.