CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 4
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER87882
EER94589
EER96589
EER96590
EES03370
EES18716
OQU80381

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G08480.1	EER94589	AT4G01370.1	22643122
AT4G08500.1	EER87882	AT4G23810.1	17587183
AT4G08500.1	EER96589	AT4G23810.1	17587183
AT4G08500.1	EER96590	AT4G23810.1	17587183
AT4G08500.1	EES03370	AT4G23810.1	17587183
AT4G08500.1	EES18716	AT4G23810.1	17587183
AT4G08500.1	OQU80381	AT4G23810.1	17587183

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d052147_P001	Maize	cytosol	90.17	89.14
TraesCS6A01G327500.1	Wheat	mitochondrion	60.89	75.6
TraesCS6B01G358800.1	Wheat	cytosol	70.91	70.36
TraesCS6D01G307100.1	Wheat	cytosol	70.71	70.17
HORVU6Hr1G079810.1	Barley	mitochondrion	71.1	69.89
PGSC0003DMT400067237	Potato	cytosol	33.72	60.14
Bra039693.1-P	Field mustard	cytosol	31.41	59.49
VIT_12s0142g00700.t01	Wine grape	cytosol	28.32	55.68
CDY36607	Canola	cytosol	33.33	52.58
OQU91136	Sorghum	cytosol	37.38	52.29
CDY24072	Canola	cytosol	35.65	51.97
VIT_12s0034g00750.t01	Wine grape	cytosol	30.25	50.16
KRH10459	Soybean	cytosol	41.81	49.32
CDY18020	Canola	cytosol	7.13	47.44
KRH53173	Soybean	nucleus	46.82	43.78
KRH42244	Soybean	cytosol	39.5	43.62
KRH64744	Soybean	nucleus	45.86	42.05
VIT_12s0034g00240.t01	Wine grape	nucleus	34.1	41.94
KRH58364	Soybean	cytosol, plastid	40.27	41.8
Bra000647.1-P	Field mustard	cytosol	42.39	40.67
VIT_18s0001g03960.t01	Wine grape	mitochondrion, nucleus	44.32	40.56
GSMUA_Achr10P...	Banana	cytosol	44.12	40.53
CDY34000	Canola	cytosol	42.58	40.18
CDY69517	Canola	cytosol	42.39	40.07
KRH16616	Soybean	nucleus	44.89	39.49
EER92515	Sorghum	cytosol, plastid	45.66	39.24
KRH16614	Soybean	mitochondrion	41.62	39.06
KRH18819	Soybean	nucleus	44.7	39.06
Solyc07g053170.2.1	Tomato	cytosol	42.97	37.1
CDY36198	Canola	cytosol	40.85	36.87
AT4G08500.1	Thale cress	cytosol, mitochondrion	42.97	36.68
KRH10458	Soybean	cytosol	32.56	35.81
Bra037860.1-P	Field mustard	cytosol	40.85	35.39
Solyc01g104530.2.1	Tomato	nucleus	44.89	35.04
CDX75154	Canola	cytosol	40.66	34.88
PGSC0003DMT400061014	Potato	mitochondrion	44.32	34.53
KXG20217	Sorghum	cytosol	40.66	32.31
AT4G08470.1	Thale cress	cytosol	34.3	31.79
AT4G08480.1	Thale cress	cytosol, plastid	42.2	28.33
EES03486	Sorghum	mitochondrion	19.08	28.05
CDY18021	Canola	nucleus	20.62	26.1
EES01324	Sorghum	plastid	20.62	23.01
OQU92769	Sorghum	mitochondrion	19.65	22.87
OQU85116	Sorghum	cytosol	24.08	22.6
OQU78383	Sorghum	mitochondrion	18.88	21.88
OQU87391	Sorghum	mitochondrion	18.5	21.15
KXG28265	Sorghum	mitochondrion	27.17	21.11
OQU87390	Sorghum	plastid	20.62	20.66
KXG22458	Sorghum	mitochondrion	17.92	19.14
EER90833	Sorghum	mitochondrion, plastid	26.78	18.73
EER98846	Sorghum	nucleus	24.47	18.7
OQU81618	Sorghum	mitochondrion	26.59	18.67
OQU88348	Sorghum	plastid	25.63	17.59
KXG25169	Sorghum	nucleus	23.51	17.55
OQU82130	Sorghum	cytosol, plastid	28.9	16.74
EES05759	Sorghum	cytosol	28.71	16.65
EES13018	Sorghum	cytosol	21.19	8.23

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.2.2	Gene3D:3.30.200.20	EntrezGene:8078939	UniProt:A0A1Z5RPV9	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EnsemblPlants:OQU85800	ProteinID:OQU85800	ProteinID:OQU85800.1
PFAM:PF00069	PIRSF:PIRSF000615	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24361
PANTHER:PTHR24361:SF489	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	EnsemblPlantsGene:SORBI_3004G311900	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001A859DC	RefSeq:XP_002452889.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr4:+:64865508..64880150

Molecular Weight (calculated)

56313.0 Da

IEP (calculated)

7.381

GRAVY (calculated)

-0.313

Length

519 amino acids

Sequence
(BLAST)

001: MAAPQRPRPQ LARINAMKHS SYPAEDDGAE DLAPVDLGPE FASQTSFRIR RGGAEVADLF RKLGLKGPED FTIPPAVYAA AMAHIPNSSR SRRQSLEAPP
101: PLPGAGADGV APAPQGPPDV SGRDAVVAAR LDAAVEDEQA VLAAKVVQSE VAEVSAESSK GSGVESSSRD VQLETGESSK RVVAAVVKER AADGLKGKGD
201: VVKVDQLRVE RSKAVVVEAP RETTAAVVQA VAESPSRSTE YLISPSPNRR LRRTITSWLK GQHLGSGSFG SVYEAISDDG FFFAVKEVSL MDQGLNAKQR
301: ILQLEHEISL LSRLEHENIV QYFGTDKEGG KLYIFLELVT QGSLAALYQK YRLQDSQVSA YTRQILNGLH YLHQRNVLHR DVKCANILVD ASGLVKLADF
401: GLAKEMSILS QAKSSKGTVY WMAPEVAKAK PHGPPADIWS LGCTVLEMLT GKVPYPDMEW THALLKIGRG IPPEIPKTLS EDARDFIKKC VQANPNDRPS
501: AAQLFEHPFV QRPLQQYST

Best Arabidopsis Sequence Match ( AT4G08500.1 )
(BLAST)

001: MDRILARMKK STGRRGGDKN ITPVRRLERR DAARNINYDA ASCSSSSAED LSVSTSSLMT RSLEFPEPTS FRIGGGVGEM DRIYRSLGVS GPDDLAISFD
101: AWEACKKRSS SDVVNRFKSF DLDKVRDQDL SEEGPSGVVV GSDSMNHKVQ GQDLSEAGPS GGIVTELSEI GNLITPVDRL VADGVVENRR VMERTPTIVK
201: SKGYLVPNNV VAVGVGVGGG IKGLRPPVLK PPPAMKRPPI DHRGSSWDFL THFAPSETVK RPSSSSSSSE DGCDEEEGKE EEAEAEEMGA RFIQLGDTAD
301: ETCSFTTNEG DSSSTVSNTS PIYPDGGAII TSWQKGQLLG RGSFGSVYEG ISGDGDFFAV KEVSLLDQGS QAQECIQQLE GEIKLLSQLQ HQNIVRYRGT
401: AKDGSNLYIF LELVTQGSLL KLYQRYQLRD SVVSLYTRQI LDGLKYLHDK GFIHRDIKCA NILVDANGAV KLADFGLAKV SKFNDIKSCK GTPFWMAPEV
501: INRKDSDGYG SPADIWSLGC TVLEMCTGQI PYSDLEPVQA LFRIGRGTLP EVPDTLSLDA RLFILKCLKV NPEERPTAAE LLNHPFVRRP LPSVGSGGSG
601: SASPLLRR

Arabidopsis Description

MEKK1Mitogen-activated protein kinase kinase kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q39008]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.