Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d011496_P002 | Maize | nucleus | 78.9 | 83.49 |
| Zm00001d044010_P001 | Maize | nucleus | 76.3 | 78.81 |
| HORVU3Hr1G059220.1 | Barley | nucleus | 52.31 | 58.77 |
| Os01t0656400-00 | Rice | nucleus | 45.95 | 58.03 |
| TraesCS3D01G238300.1 | Wheat | nucleus | 48.55 | 57.73 |
| HORVU3Hr1G059210.1 | Barley | nucleus | 40.17 | 56.97 |
| EES18716 | Sorghum | nucleus | 32.95 | 41.91 |
| GSMUA_Achr3P15840_001 | Banana | nucleus | 25.72 | 35.74 |
| VIT_15s0046g01140.t01 | Wine grape | nucleus | 31.5 | 33.75 |
| GSMUA_Achr3P25080_001 | Banana | nucleus | 31.79 | 33.13 |
| CDX94221 | Canola | nucleus | 28.03 | 30.22 |
| VIT_02s0025g01280.t01 | Wine grape | nucleus | 29.77 | 30.12 |
| AT4G11070.1 | Thale cress | nucleus | 27.17 | 30.03 |
| Bra019265.1-P | Field mustard | nucleus | 28.03 | 30.03 |
| PGSC0003DMT400031695 | Potato | nucleus | 29.19 | 29.79 |
| Bra013732.1-P | Field mustard | nucleus | 27.17 | 29.75 |
| CDY10969 | Canola | nucleus | 27.75 | 29.72 |
| CDY03518 | Canola | nucleus | 26.88 | 29.52 |
| CDY47621 | Canola | nucleus | 26.88 | 29.43 |
| CDY65042 | Canola | nucleus | 28.03 | 29.39 |
| AT4G23810.1 | Thale cress | nucleus | 27.46 | 29.32 |
| PGSC0003DMT400014949 | Potato | nucleus | 30.06 | 28.89 |
| OQU80381 | Sorghum | nucleus | 28.32 | 28.82 |
| Solyc08g082110.2.1 | Tomato | nucleus | 28.03 | 28.61 |
| KRH77637 | Soybean | nucleus | 26.59 | 28.57 |
| VIT_16s0050g02510.t01 | Wine grape | nucleus | 30.06 | 28.57 |
| CDY25271 | Canola | nucleus | 27.17 | 28.4 |
| Bra033158.1-P | Field mustard | nucleus | 27.17 | 28.4 |
| Solyc08g008280.2.1 | Tomato | nucleus | 29.48 | 28.33 |
| EER96589 | Sorghum | nucleus | 25.14 | 28.06 |
| KRG97154 | Soybean | nucleus | 29.19 | 27.9 |
| KRH41300 | Soybean | nucleus | 28.9 | 27.86 |
| EER96590 | Sorghum | nucleus | 26.3 | 27.74 |
| KRH68901 | Soybean | nucleus | 28.61 | 27.35 |
| KRH60029 | Soybean | nucleus | 28.61 | 27.27 |
| CDX87141 | Canola | nucleus | 24.57 | 27.24 |
| Solyc10g009550.2.1 | Tomato | nucleus | 22.83 | 27.24 |
| PGSC0003DMT400051194 | Potato | nucleus | 22.83 | 27.24 |
| Bra026467.1-P | Field mustard | nucleus | 24.28 | 26.92 |
| CDY19847 | Canola | nucleus | 24.28 | 26.92 |
| KRH64503 | Soybean | nucleus | 27.17 | 25.82 |
| AT5G24110.1 | Thale cress | nucleus | 22.54 | 25.74 |
| KRH06499 | Soybean | nucleus | 27.75 | 25.74 |
| EER87882 | Sorghum | nucleus | 28.03 | 25.66 |
| Bra000423.1-P | Field mustard | nucleus | 20.81 | 25.62 |
| Bra004540.1-P | Field mustard | nucleus | 21.1 | 25.61 |
| CDY42043 | Canola | nucleus | 21.68 | 25.6 |
| Bra009734.1-P | Field mustard | nucleus | 23.12 | 25.56 |
| CDX88077 | Canola | nucleus | 23.12 | 25.56 |
| CDX80414 | Canola | nucleus | 23.12 | 25.56 |
| KRH53440 | Soybean | nucleus | 26.88 | 25.55 |
| CDX80015 | Canola | nucleus | 21.68 | 25.34 |
| KRH47935 | Soybean | nucleus | 26.88 | 25.2 |
| AT2G46400.1 | Thale cress | nucleus | 21.39 | 25.08 |
| CDX95699 | Canola | nucleus | 20.52 | 24.91 |
| CDX83367 | Canola | nucleus | 19.94 | 24.82 |
| Bra014426.1-P | Field mustard | nucleus | 19.65 | 24.55 |
| CDX89127 | Canola | nucleus | 19.65 | 24.55 |
| Solyc03g007380.1.1 | Tomato | nucleus | 24.57 | 24.08 |
| PGSC0003DMT400000599 | Potato | nucleus | 23.99 | 23.99 |
| PGSC0003DMT400023502 | Potato | nucleus | 24.28 | 23.6 |
| Solyc05g050330.2.1 | Tomato | nucleus | 16.18 | 22.95 |
| Solyc01g095630.2.1 | Tomato | nucleus | 21.97 | 22.62 |
| Solyc05g050300.1.1 | Tomato | nucleus | 12.43 | 22.05 |
| PGSC0003DMT400084227 | Potato | nucleus | 18.21 | 21.43 |
| EES01667 | Sorghum | nucleus | 15.9 | 20.83 |
| PGSC0003DMT400084214 | Potato | nucleus | 19.65 | 20.54 |
| OQU78676 | Sorghum | nucleus | 13.01 | 20.0 |
| PGSC0003DMT400046351 | Potato | nucleus | 17.34 | 19.93 |
| EES01666 | Sorghum | nucleus | 13.29 | 19.49 |
| OQU88981 | Sorghum | plastid | 15.32 | 19.27 |
| Solyc05g050340.2.1 | Tomato | nucleus | 18.21 | 19.27 |
| EES15768 | Sorghum | nucleus | 18.5 | 19.16 |
| EES19695 | Sorghum | nucleus | 13.01 | 19.15 |
| EER99917 | Sorghum | mitochondrion, nucleus | 19.36 | 18.93 |
| Solyc05g050310.1.1 | Tomato | cytosol, nucleus | 3.18 | 18.64 |
| OQU82729 | Sorghum | nucleus | 12.14 | 18.5 |
| EER94940 | Sorghum | nucleus | 11.56 | 17.78 |
| CDX80415 | Canola | nucleus | 7.51 | 17.57 |
| OQU82725 | Sorghum | nucleus | 16.76 | 17.37 |
| EES01669 | Sorghum | nucleus | 13.87 | 17.33 |
| OQU77713 | Sorghum | nucleus | 18.79 | 17.2 |
| EER94905 | Sorghum | nucleus | 15.9 | 16.77 |
| EES03804 | Sorghum | nucleus | 15.61 | 16.22 |
| EES09135 | Sorghum | nucleus | 16.76 | 16.07 |
| EES01668 | Sorghum | nucleus | 17.05 | 15.65 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | EntrezGene:8054970 | UniProt:C5XFA6 | EnsemblPlants:EES03370 | ProteinID:EES03370 |
| ProteinID:EES03370.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR32096 | PANTHER:PTHR32096:SF52 |
| SMART:SM00774 | EnsemblPlantsGene:SORBI_3003G242800 | SUPFAM:SSF118290 | UniParc:UPI0001A85165 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| RefSeq:XP_002458250.1 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr3:-:58197072..58201064
Molecular Weight (calculated)
35976.1 Da
IEP (calculated)
6.922
GRAVY (calculated)
-0.349
Length
346 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGGVPEEKC ALVAELVQVL EMARQLETHM AVVVQQQQQG GGGAGGGADQ RYRALVSTMR ASIDRAVHMA VSCCAEGRPG TGQLPESPPS GGDGSSPRSG
101: GSDHAGELRG RGNAAAGQCK KRKTLPKWST QVRVSAVQDV SPLDDGLSWR KYGQKDILGA KYPRSYFRCT HRHTQSCQAS KQVQRTDGDP LLFDVVYHGA
201: HTCAQGAAAH PSNQQPAVQE QTTSPSPGFE AGTAVLPFSL RPASNKPTTG ADAAATSSRF VTTGCVSVTA SPFLSPATPE SQLVSSSSSG YAVGGGGGVA
301: MAGVRNVPDV ELASTTNSPM AMGEMDFMFP LDAADFLELG NPASYF
101: GSDHAGELRG RGNAAAGQCK KRKTLPKWST QVRVSAVQDV SPLDDGLSWR KYGQKDILGA KYPRSYFRCT HRHTQSCQAS KQVQRTDGDP LLFDVVYHGA
201: HTCAQGAAAH PSNQQPAVQE QTTSPSPGFE AGTAVLPFSL RPASNKPTTG ADAAATSSRF VTTGCVSVTA SPFLSPATPE SQLVSSSSSG YAVGGGGGVA
301: MAGVRNVPDV ELASTTNSPM AMGEMDFMFP LDAADFLELG NPASYF
001: MEMMNWERRS LLNELIHGLK AAKQLQGSSS PSLSASSSYL TTEIKENLLH NIVSSFKKAI LMLNGSTTQH NPTIELAPDP LAHPGKVPGS PASITGNPRS
101: EEFFNVRSKE FNLSSKKRKM LPKWTEQVRI SPERGLEGPH DDIFSWRKYG QKDILGAKFP RSYYRCTFRN TQYCWATKQV QRSDGDPTIF EVTYRGTHTC
201: SQGIPLPEKR ETKPKHTVAV NYQNLRASLT VRTGGLGSEA FSFPVTSPLY TYESINGGGT FYHHVGSSGP SDFTGLISTN TSTGSSPIFD VNFQFDPTAE
301: INTGFPTFFH NSI
101: EEFFNVRSKE FNLSSKKRKM LPKWTEQVRI SPERGLEGPH DDIFSWRKYG QKDILGAKFP RSYYRCTFRN TQYCWATKQV QRSDGDPTIF EVTYRGTHTC
201: SQGIPLPEKR ETKPKHTVAV NYQNLRASLT VRTGGLGSEA FSFPVTSPLY TYESINGGGT FYHHVGSSGP SDFTGLISTN TSTGSSPIFD VNFQFDPTAE
301: INTGFPTFFH NSI
Arabidopsis Description
WRKY41Probable WRKY transcription factor 41 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0Y8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.