CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES09135	Sorghum	nucleus	82.63	76.45
Zm00001d005057_P001	Maize	nucleus	71.26	68.0
Zm00001d052355_P001	Maize	nucleus	75.15	67.11
EES19695	Sorghum	nucleus	17.66	25.11
OQU78676	Sorghum	nucleus	15.87	23.56
OQU82729	Sorghum	nucleus	15.27	22.47
EES01666	Sorghum	nucleus	15.87	22.46
OQU88981	Sorghum	plastid	17.96	21.82
EER94940	Sorghum	nucleus	14.37	21.33
EES18716	Sorghum	nucleus	16.17	19.85
EES01668	Sorghum	nucleus	21.56	19.1
OQU80381	Sorghum	nucleus	18.56	18.24
EER96589	Sorghum	nucleus	16.47	17.74
EES03804	Sorghum	nucleus	17.07	17.12
EES15768	Sorghum	nucleus	17.07	17.07
EER94905	Sorghum	nucleus	16.47	16.77
EES03370	Sorghum	nucleus	17.37	16.76
EER87882	Sorghum	nucleus	18.86	16.67
EES01669	Sorghum	nucleus	13.77	16.61
EES01667	Sorghum	nucleus	12.87	16.29
EER96590	Sorghum	nucleus	15.87	16.16
OQU77713	Sorghum	nucleus	18.26	16.14
EER99917	Sorghum	mitochondrion, nucleus	15.57	14.69

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	UniProt:A0A1Z5RH15	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	EnsemblPlants:OQU82725	ProteinID:OQU82725
ProteinID:OQU82725.1	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31282	PANTHER:PTHR31282:SF13	SMART:SM00774
EnsemblPlantsGene:SORBI_3005G013400	SUPFAM:SSF118290	UniParc:UPI000B42398A	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg

Description

hypothetical protein

Coordinates

chr5:-:1211003..1212487

Molecular Weight (calculated)

36500.2 Da

IEP (calculated)

5.987

GRAVY (calculated)

-0.385

Length

334 amino acids

Sequence
(BLAST)

001: MACVADREDA VREVTQVYEL IKLQQPLLLL HSPQHPPPPP STTCQLAQSL LAKALRALNV ALSVMKQQPA PVTPISVIKA EPHQLSPPCS LASAESQAAI
101: VLSTATRGAK RRRSTEGKKK NTSSSWATVT AVPYDDGYEW RKYGEKKING TLFTRSYFRC TYKDDAGCLA TKHVQQMDNN SDPPMFHVTY NNDHTCNTSA
201: RANTGSSSNL AALLAGCCNM KQEPTGHAAA AAAATMDMKQ EVQEPPLLLP ALVDLQPSAC FHHEQIPRCQ EPLFPVSMEQ QFVCGPFRDD DSEIPSATGS
301: CISGETSWDG YSGHMAAAED DPLLDLERFL FMDY

Best Arabidopsis Sequence Match ( AT3G56400.1 )
(BLAST)

001: MDTNKAKKLK VMNQLVEGHD LTTQLQQLLS QPGSGLEDLV AKILVCFNNT ISVLDTFEPI SSSSSLAAVE GSQNASCDND GKFEDSGDSR KRLGPVKGKR
101: GCYKRKKRSE TCTIESTILE DAFSWRKYGQ KEILNAKFPR SYFRCTHKYT QGCKATKQVQ KVELEPKMFS ITYIGNHTCN TNAETPKSKT CDHHDEIFMD
201: SEDHKSPSLS TSMKEEDNPH RHHGSSTEND LSLVWPEMVF EEDYHHQASY VNGKTSTSID VLGSQDLMVF GGGGDFEFSE NEHFSIFSSC SNLS

Arabidopsis Description

WRKY70Probable WRKY transcription factor 70 [Source:UniProtKB/Swiss-Prot;Acc:Q9LY00]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.