Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Zm00001d037854_P001 | Maize | extracellular | 80.42 | 74.33 |
HORVU6Hr1G013890.3 | Barley | nucleus | 35.98 | 61.54 |
TraesCS1B01G243100.1 | Wheat | nucleus | 48.41 | 50.97 |
Os05t0321900-01 | Rice | nucleus | 56.35 | 49.77 |
TraesCS6B01G108000.1 | Wheat | nucleus | 51.59 | 49.74 |
TraesCS6A01G080500.1 | Wheat | nucleus | 50.79 | 49.1 |
TraesCS6D01G074200.1 | Wheat | nucleus | 50.26 | 48.72 |
GSMUA_Achr8P01730_001 | Banana | nucleus | 38.89 | 47.88 |
CDY06968 | Canola | nucleus | 17.46 | 42.58 |
GSMUA_Achr9P04830_001 | Banana | nucleus | 17.99 | 37.36 |
CDY13358 | Canola | nucleus | 15.34 | 37.18 |
GSMUA_Achr6P32460_001 | Banana | nucleus | 31.48 | 36.5 |
AT2G40740.3 | Thale cress | nucleus | 27.51 | 34.55 |
Solyc06g048870.1.1 | Tomato | nucleus, vacuole | 21.96 | 34.16 |
CDY71829 | Canola | nucleus | 22.49 | 33.73 |
Bra016975.1-P | Field mustard | nucleus | 25.13 | 33.45 |
CDY22473 | Canola | nucleus | 25.93 | 32.67 |
Bra000202.1-P | Field mustard | nucleus | 25.66 | 32.33 |
CDY35442 | Canola | nucleus | 25.66 | 32.23 |
KRH64215 | Soybean | nucleus | 27.78 | 31.16 |
KRH53718 | Soybean | nucleus | 26.98 | 30.82 |
CDY59625 | Canola | nucleus | 21.43 | 30.68 |
Bra014693.1-P | Field mustard | nucleus | 21.16 | 30.3 |
CDX75991 | Canola | nucleus | 20.9 | 29.92 |
PGSC0003DMT400022638 | Potato | nucleus | 26.45 | 28.82 |
VIT_13s0067g03130.t01 | Wine grape | nucleus | 27.51 | 28.57 |
OQU88981 | Sorghum | plastid | 16.14 | 22.18 |
OQU80381 | Sorghum | nucleus | 19.84 | 22.06 |
OQU78676 | Sorghum | nucleus | 12.7 | 21.33 |
EES18716 | Sorghum | nucleus | 15.08 | 20.96 |
EER96589 | Sorghum | nucleus | 16.93 | 20.65 |
OQU82729 | Sorghum | nucleus | 12.17 | 20.26 |
EES01669 | Sorghum | nucleus | 14.81 | 20.22 |
EES01666 | Sorghum | nucleus | 12.43 | 19.92 |
EER96590 | Sorghum | nucleus | 16.4 | 18.9 |
EES03370 | Sorghum | nucleus | 17.2 | 18.79 |
EES19695 | Sorghum | nucleus | 11.64 | 18.72 |
EER94940 | Sorghum | nucleus | 11.11 | 18.67 |
EES03804 | Sorghum | nucleus | 16.4 | 18.62 |
EES15768 | Sorghum | nucleus | 16.4 | 18.56 |
EER87882 | Sorghum | nucleus | 18.52 | 18.52 |
OQU82725 | Sorghum | nucleus | 16.14 | 18.26 |
EES01667 | Sorghum | nucleus | 12.43 | 17.8 |
EER94905 | Sorghum | nucleus | 14.55 | 16.77 |
EER99917 | Sorghum | mitochondrion, nucleus | 15.61 | 16.67 |
EES09135 | Sorghum | nucleus | 15.87 | 16.62 |
EES01668 | Sorghum | nucleus | 16.14 | 16.18 |
Protein Annotations
MapMan:15.5.22 | Gene3D:2.20.25.80 | UniProt:A0A1Z5R1R1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | EnsemblPlants:OQU77713 | ProteinID:OQU77713 |
ProteinID:OQU77713.1 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31282 | PANTHER:PTHR31282:SF38 | SMART:SM00774 |
EnsemblPlantsGene:SORBI_3009G092100 | SUPFAM:SSF118290 | UniParc:UPI000B425ADC | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg |
Description
hypothetical protein
Coordinates
chr9:+:20912936..20928927
Molecular Weight (calculated)
40834.7 Da
IEP (calculated)
6.884
GRAVY (calculated)
-0.556
Length
378 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDVLRQIDE GFRLARDLME ELPAAQNERT YLADRCHGIV QAYVAAIRML HPHGGTEDTA SSPPPLRPPH PPSPHFGGDG SGSGQHDHEI PQLDLLRPFL
101: GGAPSPSAPS SFPHNLGRLL AESSFINTTP VVDAFGAGTS SGGPVRRQAS SSRSSPPVQL RQQHRRRREN GERMTIMVPV QRTGNTDLPP DDGYTWRKYG
201: QKDILGSRFP RSYYRCTHKN YYGCEAKKKV QRLDDDPFTY EVTYCGNHTC LTSTTPLLTI PAGPATVAST AANMLNNSPT DSATALAAGH QDLFMPAAEH
301: PAQALSTAIQ LGISWMPSTL VGSSAPEGSS SQVNVPASGR DTAEYPVMDL ADAMFNSGSR GGSSMDAIFL ARHDRRDT
101: GGAPSPSAPS SFPHNLGRLL AESSFINTTP VVDAFGAGTS SGGPVRRQAS SSRSSPPVQL RQQHRRRREN GERMTIMVPV QRTGNTDLPP DDGYTWRKYG
201: QKDILGSRFP RSYYRCTHKN YYGCEAKKKV QRLDDDPFTY EVTYCGNHTC LTSTTPLLTI PAGPATVAST AANMLNNSPT DSATALAAGH QDLFMPAAEH
301: PAQALSTAIQ LGISWMPSTL VGSSAPEGSS SQVNVPASGR DTAEYPVMDL ADAMFNSGSR GGSSMDAIFL ARHDRRDT
001: MYSYKKISYQ MEEVMSMIFH GMKLVKSLES SLPEKPPESL LTSLDEIVKT FSDANERLKM LLEIKNSETA LNKTKPVIVS VANQMLMQME PGLMQEYWLR
101: YGGSTSSQGT EAMFQTQLMA VDGGGERNLT AAVERSGASG SSTPRQRRRK DEGEEQTVLV AALRTGNTDL PPDDNHTWRK YGQKEILGSR FPRAYYRCTH
201: QKLYNCPAKK QVQRLNDDPF TFRVTYRGSH TCYNSTAPTA SSATPSTIPI SSVTTGHSVD YGLAVVDMAD VMFGSGGVGT NMDFIFPKND PS
101: YGGSTSSQGT EAMFQTQLMA VDGGGERNLT AAVERSGASG SSTPRQRRRK DEGEEQTVLV AALRTGNTDL PPDDNHTWRK YGQKEILGSR FPRAYYRCTH
201: QKLYNCPAKK QVQRLNDDPF TFRVTYRGSH TCYNSTAPTA SSATPSTIPI SSVTTGHSVD YGLAVVDMAD VMFGSGGVGT NMDFIFPKND PS
Arabidopsis Description
WRKY55WRKY DNA-binding protein 55 [Source:TAIR;Acc:AT2G40740]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.