Factsheet for Bra014693.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75991	Canola	nucleus	98.48	98.48
Bra016975.1-P	Field mustard	nucleus	47.73	44.37
Bra000202.1-P	Field mustard	nucleus	46.97	41.33
Solyc06g048870.1.1	Tomato	nucleus, vacuole	26.52	28.81
GSMUA_Achr9P04830_001	Banana	nucleus	19.7	28.57
KRH64215	Soybean	nucleus	35.61	27.89
HORVU6Hr1G013890.3	Barley	nucleus	23.11	27.6
VIT_13s0067g03130.t01	Wine grape	nucleus	37.5	27.2
KRH53718	Soybean	nucleus	34.09	27.19
GSMUA_Achr8P01730_001	Banana	nucleus	30.68	26.38
PGSC0003DMT400022638	Potato	nucleus	33.71	25.65
GSMUA_Achr6P32460_001	Banana	nucleus	29.17	23.62
OQU77713	Sorghum	nucleus	30.3	21.16
Bra000423.1-P	Field mustard	nucleus	21.97	20.64
Bra014426.1-P	Field mustard	nucleus	21.59	20.58
Bra007243.1-P	Field mustard	nucleus	21.21	20.29
TraesCS1B01G243100.1	Wheat	nucleus	26.89	19.78
Bra004540.1-P	Field mustard	nucleus	21.21	19.65
TraesCS6A01G080500.1	Wheat	nucleus	28.79	19.44
Bra014692.1-P	Field mustard	nucleus	20.83	19.3
Os05t0321900-01	Rice	nucleus	31.06	19.16
TraesCS6B01G108000.1	Wheat	nucleus	28.41	19.13
Bra003239.1-P	Field mustard	nucleus	20.45	19.08
Zm00001d037854_P001	Maize	extracellular	29.55	19.07
TraesCS6D01G074200.1	Wheat	nucleus	28.03	18.97
Bra013732.1-P	Field mustard	nucleus	22.35	18.67
Bra019265.1-P	Field mustard	nucleus	22.73	18.58
Bra009734.1-P	Field mustard	nucleus	21.21	17.89
Bra026467.1-P	Field mustard	nucleus	20.45	17.31
Bra016974.1-P	Field mustard	nucleus	21.59	17.27
Bra000203.1-P	Field mustard	nucleus	21.21	16.47
Bra033158.1-P	Field mustard	nucleus	20.45	16.31
Bra004586.1-P	Field mustard	nucleus	19.7	15.34

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EnsemblPlantsGene:Bra014693	EnsemblPlants:Bra014693.1	EnsemblPlants:Bra014693.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576
UniProt:M4DDX4	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31282	PANTHER:PTHR31282:SF38	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI000254478C	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:

Description

AT2G40740 (E=7e-035) WRKY55, ATWRKY55 | WRKY55; transcription factor

Coordinates

chrA04:-:2291555..2293516

Molecular Weight (calculated)

29728.1 Da

IEP (calculated)

5.970

GRAVY (calculated)

-0.559

Length

264 amino acids

Sequence
(BLAST)

001: MEEIVSMIFS GINLVKELEF SLTAQESPEA LSTSLGSVST LFGGANERLN ILLARRNAYV LTQPEPKPVP MSGLDQMMMQ QIEYDLMQDY SLREGVMQGV
101: KNIDSGPSCG FSTPRPRRRK KDEEEETVFV AAARMGNMDT PPDDNHTWRK YGQKEILGSK FPRAYYRCTH EKVYKCPAKK QVQRLDEDPY TFCVTYRSSH
201: TCHFFTTSPI SSTTDTTTTD GHYGSTVVKM AEALFGNLDS VVPFGEPYFN YRSLFHGRGG DGDT

Best Arabidopsis Sequence Match ( AT2G40740.1 )
(BLAST)

001: MYSYKKISYQ MEEVMSMIFH GMKLVKSLES SLPEKPPESL LTSLDEIVKT FSDANERLKM LLEIKNSETA LNKTKPVIVS VANQMLMQME PGLMQEYWLR
101: YGGSTSSQGT EAMFQTQLMA VDGGGERNLT AAVERSGASG SSTPRQRRRK DEGEEQTVLV AALRTGNTDL PPDDNHTWRK YGQKEILGSR FPRAYYRCTH
201: QKLYNCPAKK QVQRLNDDPF TFRVTYRGSH TCYNSTAPTA SSATPSTIPI SSVTTGHSVD YGLAVVDMAD VMFGSGGVGT NMDFIFPKND PS

Arabidopsis Description

WRKY55WRKY DNA-binding protein 55 [Source:TAIR;Acc:AT2G40740]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.