Factsheet for Bra013732.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000214.1-P
Bra000647.1-P
Bra002368.1-P
Bra006595.1-P
Bra018296.1-P
Bra033467.1-P
Bra037860.1-P
Bra039693.1-P
Bra039723.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G23810.1	Bra000214.1-P	AT2G41090.1	17360592
AT4G23810.1	Bra000214.1-P	AT2G41100.1	17360592
AT4G23810.1	Bra018296.1-P	AT3G51920.1	17360592
AT4G23810.1	Bra033467.1-P	AT3G51920.1	17360592
AT4G23810.1	Bra000647.1-P	AT4G08500.1	17587183
AT4G23810.1	Bra037860.1-P	AT4G08500.1	17587183
AT4G23810.1	Bra039693.1-P	AT4G08500.1	17587183
AT4G23810.1	Bra039723.1-P	AT4G14640.1	17360592
AT4G23810.1	Bra002368.1-P	AT5G21274.1	17360592
AT4G23810.1	Bra006595.1-P	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY03518	Canola	nucleus	98.42	98.73
CDY47621	Canola	nucleus	98.1	98.1
AT4G23810.1	Thale cress	nucleus	76.58	74.69
Bra019265.1-P	Field mustard	nucleus	75.95	74.3
Bra033158.1-P	Field mustard	nucleus	55.38	52.87
KRH41300	Soybean	nucleus	43.67	38.44
KRH60029	Soybean	nucleus	43.04	37.47
PGSC0003DMT400014949	Potato	nucleus	42.09	36.94
VIT_02s0025g01280.t01	Wine grape	nucleus	39.87	36.84
Solyc08g008280.2.1	Tomato	nucleus	41.46	36.39
PGSC0003DMT400031695	Potato	nucleus	38.92	36.28
Solyc08g082110.2.1	Tomato	nucleus	38.92	36.28
KRH77637	Soybean	nucleus	36.71	36.02
HORVU3Hr1G059210.1	Barley	nucleus	25.95	33.61
GSMUA_Achr3P25080_001	Banana	nucleus	34.49	32.83
TraesCS3D01G238300.1	Wheat	nucleus	29.75	32.3
GSMUA_Achr1P27980_001	Banana	nucleus	31.65	32.26
GSMUA_Achr3P15840_001	Banana	nucleus	25.32	32.13
Bra009734.1-P	Field mustard	nucleus	31.65	31.95
GSMUA_Achr7P14140_001	Banana	nucleus	36.39	31.94
GSMUA_AchrUn_...	Banana	nucleus	29.75	31.86
Bra026467.1-P	Field mustard	nucleus	30.7	31.09
GSMUA_Achr6P05710_001	Banana	nucleus	32.91	30.59
TraesCS1B01G440700.1	Wheat	nucleus	23.1	30.29
TraesCS1B01G440600.1	Wheat	nucleus	22.78	30.25
HORVU3Hr1G059220.1	Barley	nucleus	29.43	30.19
TraesCS1D01G418500.1	Wheat	nucleus	23.1	30.17
TraesCS2D01G168600.1	Wheat	nucleus	27.85	30.03
Os11t0685700-00	Rice	nucleus	18.04	29.69
TraesCS1D01G418000.1	Wheat	nucleus	23.1	29.67
HORVU1Hr1G090110.1	Barley	nucleus	23.73	29.64
Os05t0571200-01	Rice	nucleus	25.95	29.6
TraesCS1D01G418600.1	Wheat	nucleus	23.1	29.55
HORVU1Hr1G090170.1	Barley	nucleus	23.1	29.55
Bra004540.1-P	Field mustard	nucleus	26.58	29.47
TraesCS2B01G187500.1	Wheat	nucleus	27.22	29.35
Bra014426.1-P	Field mustard	nucleus	25.63	29.24
Os01t0656400-00	Rice	nucleus	25.0	28.83
HORVU1Hr1G090190.2	Barley	nucleus	23.1	28.74
TraesCS2A01G161500.1	Wheat	nucleus	26.9	28.72
EES18716	Sorghum	nucleus	24.68	28.68
TraesCS1D01G418400.1	Wheat	nucleus	23.1	28.63
TraesCS1B01G440300.1	Wheat	nucleus	22.15	28.57
Os08t0386200-01	Rice	nucleus	28.8	28.53
Bra000423.1-P	Field mustard	nucleus	25.32	28.47
TraesCS1A01G410500.1	Wheat	nucleus	22.78	28.46
TraesCS1A01G410700.1	Wheat	nucleus	22.15	28.34
HORVU5Hr1G034830.3	Barley	nucleus	29.75	28.31
HORVU2Hr1G029430.2	Barley	mitochondrion, nucleus	21.84	28.28
Zm00001d050247_P001	Maize	nucleus	28.48	28.12
HORVU1Hr1G090130.4	Barley	nucleus	23.1	28.08
TraesCS5D01G190700.1	Wheat	nucleus	30.06	27.86
TraesCS5B01G183700.1	Wheat	nucleus	29.75	27.73
TraesCS1B01G440500.1	Wheat	nucleus	22.78	27.59
Zm00001d020136_P001	Maize	nucleus	26.27	27.48
TraesCS5B01G183800.1	Wheat	nucleus	29.75	27.17
EES03370	Sorghum	nucleus	29.75	27.17
TraesCS5A01G185600.1	Wheat	nucleus	29.11	26.82
TraesCS5D01G190800.1	Wheat	nucleus	29.75	26.78
OQU80381	Sorghum	nucleus	28.8	26.76
TraesCS1A01G410600.1	Wheat	nucleus	19.62	26.61
Zm00001d011496_P002	Maize	nucleus	27.53	26.61
Zm00001d020137_P001	Maize	nucleus	27.22	26.54
EER87882	Sorghum	nucleus	31.65	26.45
EER96589	Sorghum	nucleus	25.95	26.45
Zm00001d032265_P001	Maize	nucleus	27.85	26.43
HORVU0Hr1G012740.1	Barley	nucleus	26.9	26.32
Zm00001d036244_P001	Maize	nucleus	30.38	26.23
TraesCS7D01G110600.1	Wheat	nucleus	30.38	26.09
TraesCS5A01G185700.1	Wheat	nucleus	28.8	26.07
Os09t0334500-01	Rice	nucleus	29.75	26.04
EER96590	Sorghum	nucleus	26.9	25.91
GSMUA_Achr10P...	Banana	extracellular, nucleus	25.32	25.81
HORVU3Hr1G058670.1	Barley	nucleus	20.25	25.7
Zm00001d005622_P001	Maize	nucleus	26.9	25.68
TraesCS7B01G012600.1	Wheat	nucleus	30.06	25.61
Zm00001d045283_P001	Maize	nucleus	31.65	25.25
TraesCS7A01G116000.1	Wheat	nucleus	30.06	25.2
Os06t0158100-00	Rice	nucleus	30.7	24.81
Zm00001d044010_P001	Maize	nucleus	26.27	24.78
GSMUA_Achr4P15640_001	Banana	nucleus	27.22	24.64
Bra016975.1-P	Field mustard	nucleus	21.84	24.3
HORVU5Hr1G056130.2	Barley	nucleus	29.75	23.98
Bra000202.1-P	Field mustard	nucleus	22.47	23.67
Zm00001d009619_P002	Maize	nucleus	21.52	22.9
Bra014693.1-P	Field mustard	nucleus	18.67	22.35
HORVU0Hr1G012750.1	Barley	nucleus	22.78	21.69
Bra007243.1-P	Field mustard	nucleus	18.35	21.01
Bra014692.1-P	Field mustard	nucleus	17.72	19.65
Bra003239.1-P	Field mustard	nucleus	17.41	19.43
Bra000203.1-P	Field mustard	nucleus	19.94	18.53
Bra004586.1-P	Field mustard	nucleus	18.99	17.7
Bra016974.1-P	Field mustard	nucleus	17.72	16.97

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EnsemblPlantsGene:Bra013732	EnsemblPlants:Bra013732.1	EnsemblPlants:Bra013732.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576
UniProt:M4DB72	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR32096	PANTHER:PTHR32096:SF36	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI0002545ED3	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:

Description

AT4G23810 (E=7e-113) WRKY53, ATWRKY53 | WRKY53; DNA binding / protein binding / transcription activator/ transcription factor

Coordinates

chrA01:-:7480980..7482106

Molecular Weight (calculated)

35271.2 Da

IEP (calculated)

6.059

GRAVY (calculated)

-0.663

Length

316 amino acids

Sequence
(BLAST)

001: MEGQKAMLAW EQKTLQSEVS LGLEAAKKLQ ARLSEASSPS SLSSYPAAET NEILIEQILS SYDKVLVMLN WSSSPPVQLT PATVAVVPVV NSGGIPESPA
101: SINGSPRSED GGGSSESHRQ DHMFNSRKRK MLPKWTEKVR ISPERGLEGP QDDVYSWRKY GQKDILGAKF PRSYYRCTHR STQNCWATKQ VQRSDSDPTV
201: FELTYRGTHT CQQGTPPPSH PPPASPEKRN TRPKLTTTAQ KPNDILESLK TSLTVRTEGL DDADNVFSFP NTPPFCDFRT INDEFSSPIF DVVDWLNPTV
301: EIDPAFPTFL QESIYY

Best Arabidopsis Sequence Match ( AT4G23810.1 )
(BLAST)

001: MEGRDMLSWE QKTLLSELIN GFDAAKKLQA RLREAPSPSS SFSSPATAVA ETNEILVKQI VSSYERSLLL LNWSSSPSVQ LIPTPVTVVP VANPGSVPES
101: PASINGSPRS EEFADGGGSS ESHHRQDYIF NSKKRKMLPK WSEKVRISPE RGLEGPQDDV FSWRKYGQKD ILGAKFPRSY YRCTHRSTQN CWATKQVQRS
201: DGDATVFEVT YRGTHTCSQA ITRTPPLASP EKRQDTRVKP AITQKPKDIL ESLKSNLTVR TDGLDDGKDV FSFPDTPPFY NYGTINGEFG HVESSPIFDV
301: VDWFNPTVEI DTTFPAFLHE SIYY

Arabidopsis Description

WRKY53Probable WRKY transcription factor 53 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUP6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.