Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G190700.1 | Wheat | nucleus | 94.46 | 95.01 |
| TraesCS5B01G183700.1 | Wheat | nucleus | 93.59 | 94.69 |
| HORVU5Hr1G034830.3 | Barley | nucleus | 86.88 | 89.76 |
| HORVU3Hr1G058670.1 | Barley | nucleus | 57.43 | 79.12 |
| TraesCS5A01G185700.1 | Wheat | nucleus | 69.1 | 67.91 |
| HORVU0Hr1G012740.1 | Barley | nucleus | 59.18 | 62.85 |
| HORVU0Hr1G012750.1 | Barley | nucleus | 58.02 | 59.94 |
| TraesCS2A01G161500.1 | Wheat | nucleus | 38.48 | 44.59 |
| GSMUA_Achr3P15840_001 | Banana | nucleus | 32.36 | 44.58 |
| GSMUA_Achr3P25080_001 | Banana | nucleus | 34.69 | 35.84 |
| Solyc08g082110.2.1 | Tomato | nucleus | 33.53 | 33.92 |
| VIT_15s0046g01140.t01 | Wine grape | nucleus | 31.78 | 33.75 |
| PGSC0003DMT400031695 | Potato | nucleus | 33.24 | 33.63 |
| TraesCS1A01G410700.1 | Wheat | nucleus | 23.62 | 32.79 |
| KRH77637 | Soybean | nucleus | 30.32 | 32.3 |
| VIT_02s0025g01280.t01 | Wine grape | nucleus | 31.78 | 31.87 |
| TraesCS1A01G410500.1 | Wheat | nucleus | 23.32 | 31.62 |
| VIT_16s0050g02510.t01 | Wine grape | nucleus | 33.24 | 31.32 |
| KRH68901 | Soybean | nucleus | 32.65 | 30.94 |
| KRH64503 | Soybean | nucleus | 32.07 | 30.22 |
| KRH53440 | Soybean | nucleus | 32.07 | 30.22 |
| KRG97154 | Soybean | nucleus | 31.78 | 30.11 |
| KRH41300 | Soybean | nucleus | 31.49 | 30.08 |
| Bra019265.1-P | Field mustard | nucleus | 28.28 | 30.03 |
| CDX94221 | Canola | nucleus | 27.99 | 29.91 |
| AT2G46400.1 | Thale cress | nucleus | 25.66 | 29.83 |
| PGSC0003DMT400014949 | Potato | nucleus | 31.2 | 29.72 |
| CDY10969 | Canola | nucleus | 27.99 | 29.72 |
| AT4G11070.1 | Thale cress | nucleus | 27.11 | 29.71 |
| Solyc10g009550.2.1 | Tomato | nucleus | 25.07 | 29.66 |
| PGSC0003DMT400051194 | Potato | nucleus | 25.07 | 29.66 |
| TraesCS1A01G410600.1 | Wheat | nucleus | 20.12 | 29.61 |
| CDY65042 | Canola | nucleus | 28.28 | 29.39 |
| CDY03518 | Canola | nucleus | 26.82 | 29.21 |
| Bra013732.1-P | Field mustard | nucleus | 26.82 | 29.11 |
| CDY47621 | Canola | nucleus | 26.82 | 29.11 |
| KRH47935 | Soybean | nucleus | 31.2 | 29.0 |
| KRH06499 | Soybean | nucleus | 31.49 | 28.95 |
| Solyc08g008280.2.1 | Tomato | nucleus | 30.32 | 28.89 |
| Bra014426.1-P | Field mustard | nucleus | 23.32 | 28.88 |
| CDX89127 | Canola | nucleus | 23.32 | 28.88 |
| CDX80414 | Canola | nucleus | 26.24 | 28.75 |
| AT4G23810.1 | Thale cress | nucleus | 27.11 | 28.7 |
| Bra033158.1-P | Field mustard | nucleus | 27.7 | 28.7 |
| CDY25271 | Canola | nucleus | 27.7 | 28.7 |
| Bra000423.1-P | Field mustard | nucleus | 23.32 | 28.47 |
| KRH60029 | Soybean | nucleus | 30.03 | 28.37 |
| AT5G24110.1 | Thale cress | nucleus | 24.78 | 28.05 |
| Bra026467.1-P | Field mustard | nucleus | 25.36 | 27.88 |
| Bra009734.1-P | Field mustard | nucleus | 25.36 | 27.8 |
| CDX88077 | Canola | nucleus | 25.36 | 27.8 |
| Bra004540.1-P | Field mustard | nucleus | 23.03 | 27.72 |
| CDX95699 | Canola | nucleus | 23.03 | 27.72 |
| CDX83367 | Canola | nucleus | 22.45 | 27.7 |
| CDX87141 | Canola | nucleus | 25.07 | 27.56 |
| CDY19847 | Canola | nucleus | 24.78 | 27.24 |
| Solyc03g007380.1.1 | Tomato | nucleus | 27.99 | 27.2 |
| PGSC0003DMT400000599 | Potato | nucleus | 27.41 | 27.17 |
| Solyc05g050310.1.1 | Tomato | cytosol, nucleus | 4.66 | 27.12 |
| CDX80015 | Canola | nucleus | 23.32 | 27.03 |
| CDY42043 | Canola | nucleus | 22.74 | 26.62 |
| Solyc01g095630.2.1 | Tomato | nucleus | 25.95 | 26.49 |
| PGSC0003DMT400023502 | Potato | nucleus | 27.11 | 26.12 |
| Solyc05g050330.2.1 | Tomato | nucleus | 17.78 | 25.0 |
| TraesCS7A01G116000.1 | Wheat | nucleus | 26.53 | 24.14 |
| Solyc05g050300.1.1 | Tomato | nucleus | 13.7 | 24.1 |
| TraesCS1A01G300900.1 | Wheat | nucleus | 21.57 | 23.95 |
| PGSC0003DMT400046351 | Potato | nucleus | 20.99 | 23.92 |
| PGSC0003DMT400084227 | Potato | nucleus | 20.41 | 23.81 |
| TraesCS3A01G343900.1 | Wheat | nucleus | 18.66 | 23.44 |
| TraesCS2A01G489500.1 | Wheat | nucleus | 19.83 | 23.13 |
| TraesCS3A01G343000.1 | Wheat | nucleus | 17.2 | 22.69 |
| TraesCS3A01G343100.1 | Wheat | nucleus | 17.49 | 22.64 |
| TraesCS1A01G301100.1 | Wheat | plastid | 19.53 | 22.11 |
| TraesCS3A01G343700.1 | Wheat | nucleus | 17.49 | 22.06 |
| Solyc05g050340.2.1 | Tomato | nucleus | 20.99 | 22.02 |
| TraesCS2A01G043600.1 | Wheat | nucleus | 17.49 | 21.66 |
| TraesCS4A01G193600.1 | Wheat | nucleus | 13.99 | 21.62 |
| PGSC0003DMT400084214 | Potato | nucleus | 20.7 | 21.45 |
| TraesCS2A01G043700.1 | Wheat | nucleus | 16.33 | 20.59 |
| TraesCS1A01G301000.1 | Wheat | nucleus | 17.2 | 20.56 |
| TraesCS4A01G128100.1 | Wheat | nucleus | 11.95 | 19.9 |
| TraesCS2A01G043800.1 | Wheat | nucleus | 16.91 | 19.59 |
| TraesCS1A01G301200.1 | Wheat | nucleus | 16.33 | 19.31 |
| TraesCS6A01G080500.1 | Wheat | nucleus | 21.57 | 18.93 |
| TraesCS7A01G338500.1 | Wheat | nucleus, plastid | 19.83 | 18.53 |
| TraesCS3A01G343600.1 | Wheat | nucleus | 17.2 | 18.32 |
| CDX80415 | Canola | nucleus | 7.87 | 18.24 |
| TraesCS4A01G135000.1 | Wheat | nucleus | 13.41 | 18.11 |
| TraesCS2A01G104900.1 | Wheat | nucleus | 17.78 | 18.1 |
| TraesCS3A01G343500.1 | Wheat | nucleus | 18.66 | 17.83 |
| TraesCS2A01G104800.1 | Wheat | nucleus | 17.49 | 17.14 |
| TraesCS2A01G497400.1 | Wheat | nucleus | 17.49 | 16.67 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR32096 | PANTHER:PTHR32096:SF33 | SMART:SM00774 | SUPFAM:SSF118290 | EnsemblPlantsGene:TraesCS5A01G185600 | EnsemblPlants:TraesCS5A01G185600.1 |
| InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr5A:+:385955280..385956893
Molecular Weight (calculated)
37295.5 Da
IEP (calculated)
6.184
GRAVY (calculated)
-0.493
Length
343 amino acids
Sequence
(BLAST)
(BLAST)
001: MESVDENGGS RLVVTELGYI KELVRQLDVN LGGCPDHCKR LAAQIFAVTE RSIGMIRSGH FDCRKRSAAG LDSPPFSATP SPLSDVSGVP FHANNKKRKT
101: MEKRKHQVRV SSEGAGAETP VDDGHSWRKY GQKDILGAKH PRGYYRCTHR KSQGCAATKQ VQRADEDPAL FDVIYHGEHT CVHKTVAAAA AMVQPAEENP
201: DARRHLQNLS TSLTVNTEGL TATTGHQGCG TTTSFCFSSQ AVSALTTPQE HYPFSMPSTP ENCFGQGASL STSLEPSPVT SDSNRFSMNP FQAEWRAQSE
301: YDEVVSALVA AGTMPALAME MEENAFSMDG FEFDVSCFFA SDD
101: MEKRKHQVRV SSEGAGAETP VDDGHSWRKY GQKDILGAKH PRGYYRCTHR KSQGCAATKQ VQRADEDPAL FDVIYHGEHT CVHKTVAAAA AMVQPAEENP
201: DARRHLQNLS TSLTVNTEGL TATTGHQGCG TTTSFCFSSQ AVSALTTPQE HYPFSMPSTP ENCFGQGASL STSLEPSPVT SDSNRFSMNP FQAEWRAQSE
301: YDEVVSALVA AGTMPALAME MEENAFSMDG FEFDVSCFFA SDD
001: MMMEEKLVIN ELELGKELAN RLMNNLKHTS SVDSNKTLIS DILRIYQNAI FMLSFNQDKN ILKRSLEIDG KDSKNVFKKR KVSEKNTEKV KVFVATEQEN
101: GSIDDGHCWR KYGQKEIHGS KNPRAYYRCT HRFTQDCLAV KQVQKSDTDP SLFEVKYLGN HTCNNITSPK TTTNFSVSLT NTNIFEGNRV HVTEQSEDMK
201: PTKSEEVMIS LEDLENKKNI FRTFSFSNHE IENGVWKSNL FLGNFVEDLS PATSGSAITS EVLSAPAAVE NSETADSYFS SLDNIIDFGQ DWLWS
101: GSIDDGHCWR KYGQKEIHGS KNPRAYYRCT HRFTQDCLAV KQVQKSDTDP SLFEVKYLGN HTCNNITSPK TTTNFSVSLT NTNIFEGNRV HVTEQSEDMK
201: PTKSEEVMIS LEDLENKKNI FRTFSFSNHE IENGVWKSNL FLGNFVEDLS PATSGSAITS EVLSAPAAVE NSETADSYFS SLDNIIDFGQ DWLWS
Arabidopsis Description
WRKY46Probable WRKY transcription factor 46 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKD9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.