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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • plastid 1
  • nucleus 3
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:nucleus, secretory
iPSORT:plastid
MultiLoc:nucleus
Predotar:secretory
PProwler:secretory
WoLF PSORT:nucleus
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3D01G337500.1 Wheat nucleus 94.85 95.56
TraesCS3B01G375800.1 Wheat nucleus 85.29 86.25
TraesCS3A01G343900.1 Wheat nucleus 86.4 86.08
HORVU3Hr1G080980.1 Barley nucleus 72.79 80.82
HORVU3Hr1G081030.3 Barley nucleus 79.41 67.5
Os01t0821600-01 Rice nucleus 56.99 55.36
EES01669 Sorghum nucleus 51.1 50.18
Zm00001d012505_P001 Maize nucleus 47.79 49.24
Zm00001d043060_P001 Maize nucleus 51.1 48.6
TraesCS1A01G301100.1 Wheat plastid 37.13 33.33
TraesCS2A01G043600.1 Wheat nucleus 33.82 33.21
TraesCS2A01G043800.1 Wheat nucleus 33.46 30.74
TraesCS1A01G300900.1 Wheat nucleus 34.19 30.1
TraesCS2A01G043700.1 Wheat nucleus 29.41 29.41
PGSC0003DMT400070939 Potato nucleus 19.85 24.22
TraesCS2A01G161500.1 Wheat nucleus 25.37 23.31
PGSC0003DMT400021625 Potato nucleus 17.65 22.02
TraesCS1A01G410700.1 Wheat nucleus 19.85 21.86
TraesCS1A01G410600.1 Wheat nucleus 18.38 21.46
TraesCS1A01G410500.1 Wheat nucleus 19.85 21.34
KRH16921 Soybean nucleus 18.38 20.83
KRH40720 Soybean nucleus 22.79 20.67
KRH09521 Soybean nucleus 19.85 20.38
KRH64216 Soybean nucleus 23.16 19.87
KRH00435 Soybean nucleus 21.69 19.73
KRH53716 Soybean nucleus 22.79 19.44
TraesCS4A01G128100.1 Wheat nucleus 14.71 19.42
KRH16920 Soybean nucleus 21.32 19.14
KRH21925 Soybean nucleus 20.59 19.05
VIT_13s0067g03140.t01 Wine grape nucleus 21.32 18.53
TraesCS3A01G343000.1 Wheat nucleus 17.65 18.46
KRH21926 Soybean nucleus 19.85 18.24
KRH16918 Soybean nucleus 21.69 17.93
KRH21928 Soybean nucleus 17.65 17.78
TraesCS3A01G343100.1 Wheat nucleus 17.28 17.74
PGSC0003DMT400053122 Potato nucleus 18.01 17.69
TraesCS2A01G489500.1 Wheat nucleus 19.12 17.69
TraesCS5A01G185600.1 Wheat nucleus 22.06 17.49
Solyc03g095770.2.1 Tomato nucleus 17.28 17.22
TraesCS2A01G104900.1 Wheat nucleus 21.32 17.21
TraesCS5A01G185700.1 Wheat nucleus 22.06 17.19
GSMUA_Achr5P07490_001 Banana endoplasmic reticulum 20.59 16.72
TraesCS7A01G116000.1 Wheat nucleus 23.16 16.71
TraesCS4A01G193600.1 Wheat nucleus 13.6 16.67
KRH21927 Soybean nucleus 18.01 16.33
CDY27218 Canola nucleus 16.54 16.3
Bra007243.1-P Field mustard nucleus 16.54 16.3
TraesCS3A01G343600.1 Wheat nucleus 19.12 16.15
TraesCS2A01G497400.1 Wheat nucleus 21.32 16.11
AT3G56400.1 Thale cress nucleus 17.28 15.99
CDX72140 Canola nucleus 16.18 15.94
TraesCS2A01G104800.1 Wheat nucleus 20.22 15.71
TraesCS1A01G301000.1 Wheat nucleus 16.54 15.68
Bra003239.1-P Field mustard nucleus 16.18 15.55
CDX67645 Canola nucleus 16.18 15.55
TraesCS1A01G301200.1 Wheat nucleus 16.54 15.52
PGSC0003DMT400075091 Potato nucleus 16.54 15.36
TraesCS4A01G135000.1 Wheat nucleus 14.34 15.35
CDX75992 Canola nucleus 15.81 15.09
Bra014692.1-P Field mustard nucleus 15.81 15.09
TraesCS7A01G338500.1 Wheat nucleus, plastid 20.22 14.99
CDY66845 Canola nucleus 15.81 14.98
CDY32013 Canola nucleus 15.44 14.84
Solyc09g015770.2.1 Tomato extracellular, nucleus 15.81 14.78
CDY06967 Canola nucleus 17.28 14.24
CDY35441 Canola nucleus 17.65 14.12
Bra000203.1-P Field mustard nucleus 17.65 14.12
CDX79972 Canola nucleus 17.28 13.95
Bra016974.1-P Field mustard nucleus 16.91 13.94
TraesCS3A01G343500.1 Wheat nucleus 18.38 13.93
Bra004586.1-P Field mustard nucleus 17.28 13.86
CDY23883 Canola nucleus 17.28 13.86
CDY22474 Canola nucleus 17.28 13.82
CDY14738 Canola nucleus 16.54 13.64
KRH64882 Soybean nucleus 11.76 13.62
VIT_08s0058g01390.t01 Wine grape nucleus 17.65 13.45
TraesCS6A01G080500.1 Wheat nucleus 18.01 12.53
AT2G40750.1 Thale cress nucleus 15.81 12.43
Protein Annotations
MapMan:15.5.22Gene3D:2.20.25.80GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0003700
GO:GO:0005488GO:GO:0006139GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987GO:GO:0043565InterPro:IPR003657InterPro:IPR036576PFAM:PF03106PFscan:PS50811
PANTHER:PTHR31282PANTHER:PTHR31282:SF10SMART:SM00774SUPFAM:SSF118290EnsemblPlantsGene:TraesCS3A01G343700EnsemblPlants:TraesCS3A01G343700.1
InterPro:WRKY_domInterPro:WRKY_dom_sfSEG:seg:::
Description
No Description!
Coordinates
chr3A:+:593176757..593177726
Molecular Weight (calculated)
28897.8 Da
IEP (calculated)
6.784
GRAVY (calculated)
-0.286
Length
272 amino acids
Sequence
(BLAST)
001: MALATPTAVV LELMTMGQQS AAHLGELLRA ASPPVRAEHQ ALAAEILRCS DRVIAAVSAG ATDKKRKMTD PSATSCHLPS AAMPSKRRVR AAEAHIEVQA
101: HTTADGFVWR KYGQKDINGS NHPRLYYRCA FSGEGCAATR RVQRSQEEPA AFVIAYYGEH TCGAGFGDAC QQGAATVPPT VVDSGSNARG AVGAVDWNRG
201: SLLLPSLPAE HGARRHGEAP GDTSRGWLSP SSSSYSSEVE LGASSVGEFL DGSFDWEWET VVNSLRFGDL LQ
Best Arabidopsis Sequence Match ( AT2G46400.1 )
(BLAST)
001: MMMEEKLVIN ELELGKELAN RLMNNLKHTS SVDSNKTLIS DILRIYQNAI FMLSFNQDKN ILKRSLEIDG KDSKNVFKKR KVSEKNTEKV KVFVATEQEN
101: GSIDDGHCWR KYGQKEIHGS KNPRAYYRCT HRFTQDCLAV KQVQKSDTDP SLFEVKYLGN HTCNNITSPK TTTNFSVSLT NTNIFEGNRV HVTEQSEDMK
201: PTKSEEVMIS LEDLENKKNI FRTFSFSNHE IENGVWKSNL FLGNFVEDLS PATSGSAITS EVLSAPAAVE NSETADSYFS SLDNIIDFGQ DWLWS
Arabidopsis Description
WRKY46Probable WRKY transcription factor 46 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKD9]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.