Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G56400.1 | KRH10294 | AT3G46090.1 | 17259181 |
| AT3G56400.1 | KRH23029 | AT3G46090.1 | 17259181 |
| AT3G56400.1 | KRH24840 | AT3G46090.1 | 17259181 |
| AT3G56400.1 | KRH29844 | AT3G46090.1 | 17259181 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH16921 | Soybean | nucleus | 59.08 | 74.58 |
| KRH16918 | Soybean | nucleus | 80.53 | 74.16 |
| KRH64216 | Soybean | nucleus | 46.86 | 44.8 |
| KRH53716 | Soybean | nucleus | 46.2 | 43.89 |
| PGSC0003DMT400070939 | Potato | nucleus | 28.05 | 38.12 |
| VIT_13s0067g03140.t01 | Wine grape | nucleus | 35.64 | 34.5 |
| Solyc03g095770.2.1 | Tomato | nucleus | 28.71 | 31.87 |
| PGSC0003DMT400053122 | Potato | nucleus | 29.04 | 31.77 |
| KRH09521 | Soybean | nucleus | 26.07 | 29.81 |
| KRH40720 | Soybean | nucleus | 28.38 | 28.67 |
| KRH21928 | Soybean | nucleus | 24.75 | 27.78 |
| KRH00435 | Soybean | nucleus | 27.39 | 27.76 |
| KRH21926 | Soybean | nucleus | 27.06 | 27.7 |
| KRH21925 | Soybean | nucleus | 26.73 | 27.55 |
| KRH21927 | Soybean | nucleus | 26.73 | 27.0 |
| KRH64882 | Soybean | nucleus | 20.46 | 26.38 |
| TraesCS7B01G249700.1 | Wheat | nucleus | 21.45 | 23.72 |
| Bra007243.1-P | Field mustard | nucleus | 20.46 | 22.46 |
| CDY27218 | Canola | nucleus | 20.46 | 22.46 |
| TraesCS7D01G345700.1 | Wheat | nucleus | 21.78 | 22.15 |
| CDX72140 | Canola | nucleus | 20.13 | 22.1 |
| TraesCS3B01G375800.1 | Wheat | nucleus | 19.14 | 21.56 |
| TraesCS2D01G489700.1 | Wheat | nucleus | 20.79 | 21.5 |
| HORVU0Hr1G030830.1 | Barley | nucleus, plastid | 19.8 | 21.43 |
| TraesCS3D01G337600.1 | Wheat | nucleus | 19.14 | 21.4 |
| TraesCS3A01G343700.1 | Wheat | nucleus | 19.14 | 21.32 |
| TraesCS3A01G343900.1 | Wheat | nucleus | 19.14 | 21.25 |
| HORVU7Hr1G083270.2 | Barley | nucleus | 21.45 | 21.1 |
| TraesCS2A01G489500.1 | Wheat | nucleus | 20.46 | 21.09 |
| Bra014692.1-P | Field mustard | nucleus | 19.8 | 21.05 |
| CDX75992 | Canola | nucleus | 19.8 | 21.05 |
| EES01669 | Sorghum | nucleus | 19.14 | 20.94 |
| HORVU4Hr1G050320.2 | Barley | nucleus | 20.46 | 20.81 |
| TraesCS3D01G337500.1 | Wheat | nucleus | 18.48 | 20.74 |
| TraesCS4D01G172200.1 | Wheat | nucleus | 20.46 | 20.74 |
| TraesCS3B01G375700.1 | Wheat | nucleus | 18.48 | 20.59 |
| TraesCS2B01G517400.1 | Wheat | nucleus | 20.13 | 20.54 |
| TraesCS4B01G170100.1 | Wheat | nucleus | 20.46 | 20.53 |
| CDX67645 | Canola | nucleus | 19.14 | 20.49 |
| CDY66845 | Canola | nucleus | 19.14 | 20.21 |
| Bra003239.1-P | Field mustard | nucleus | 18.81 | 20.14 |
| AT3G56400.1 | Thale cress | nucleus | 19.47 | 20.07 |
| Os05t0322900-01 | Rice | nucleus | 21.45 | 19.94 |
| CDY32013 | Canola | nucleus | 18.48 | 19.79 |
| TraesCS1A01G300900.1 | Wheat | nucleus | 20.13 | 19.74 |
| GSMUA_Achr5P07490_001 | Banana | endoplasmic reticulum | 21.78 | 19.7 |
| HORVU2Hr1G109330.1 | Barley | mitochondrion, nucleus, vacuole | 21.12 | 19.69 |
| TraesCS2A01G043600.1 | Wheat | nucleus | 17.82 | 19.49 |
| EES15768 | Sorghum | nucleus | 21.45 | 19.46 |
| Zm00001d012505_P001 | Maize | nucleus | 16.83 | 19.32 |
| Os01t0821600-01 | Rice | nucleus | 17.82 | 19.29 |
| KRH41300 | Soybean | nucleus | 22.77 | 19.22 |
| TraesCS2B01G056300.1 | Wheat | nucleus | 17.82 | 19.22 |
| TraesCS1D01G300700.1 | Wheat | nucleus | 19.14 | 19.14 |
| CDY22474 | Canola | nucleus | 21.45 | 19.12 |
| TraesCS2A01G043700.1 | Wheat | nucleus | 17.16 | 19.12 |
| TraesCS2B01G056400.1 | Wheat | nucleus, plastid | 18.15 | 19.1 |
| TraesCS4A01G135000.1 | Wheat | nucleus | 15.84 | 18.9 |
| TraesCS1D01G300500.1 | Wheat | plastid | 19.14 | 18.89 |
| Zm00001d043060_P001 | Maize | nucleus | 17.82 | 18.88 |
| Os05t0478800-00 | Rice | nucleus | 13.86 | 18.83 |
| Bra000203.1-P | Field mustard | nucleus | 21.12 | 18.82 |
| CDY35441 | Canola | nucleus | 21.12 | 18.82 |
| TraesCS7A01G338500.1 | Wheat | nucleus, plastid | 22.77 | 18.8 |
| KRG97154 | Soybean | nucleus | 22.44 | 18.78 |
| HORVU3Hr1G080980.1 | Barley | nucleus | 15.18 | 18.78 |
| CDX79972 | Canola | nucleus | 20.79 | 18.69 |
| CDY23883 | Canola | nucleus | 20.79 | 18.58 |
| TraesCS2D01G042700.1 | Wheat | nucleus | 17.82 | 18.43 |
| HORVU1Hr1G069620.7 | Barley | nucleus | 18.15 | 18.33 |
| Bra004586.1-P | Field mustard | nucleus | 20.46 | 18.29 |
| KRH68901 | Soybean | nucleus | 21.78 | 18.23 |
| CDY14738 | Canola | nucleus | 19.8 | 18.18 |
| TraesCS1A01G301100.1 | Wheat | plastid | 18.15 | 18.15 |
| TraesCS2A01G104900.1 | Wheat | nucleus | 20.13 | 18.1 |
| Zm00001d022437_P001 | Maize | mitochondrion, nucleus | 20.13 | 18.05 |
| KRH77637 | Soybean | nucleus | 19.14 | 18.01 |
| EER94905 | Sorghum | nucleus | 19.47 | 17.99 |
| KRH60029 | Soybean | nucleus | 21.45 | 17.91 |
| TraesCS2A01G043800.1 | Wheat | nucleus | 17.49 | 17.91 |
| Bra016974.1-P | Field mustard | nucleus | 19.47 | 17.88 |
| TraesCS2D01G104600.1 | Wheat | nucleus | 19.8 | 17.86 |
| Zm00001d047523_P001 | Maize | nucleus | 19.14 | 17.85 |
| HORVU2Hr1G017740.3 | Barley | nucleus | 20.46 | 17.82 |
| Os07t0680400-01 | Rice | nucleus | 19.47 | 17.72 |
| TraesCS2D01G104700.1 | Wheat | nucleus | 20.13 | 17.63 |
| TraesCS1D01G300300.1 | Wheat | nucleus | 17.82 | 17.59 |
| CDY06967 | Canola | nucleus | 19.14 | 17.58 |
| HORVU2Hr1G006600.1 | Barley | nucleus | 18.48 | 17.45 |
| AT2G40750.1 | Thale cress | nucleus | 19.8 | 17.34 |
| KRH53440 | Soybean | nucleus | 20.79 | 17.31 |
| KRH64503 | Soybean | nucleus | 20.79 | 17.31 |
| HORVU3Hr1G081030.3 | Barley | nucleus | 18.15 | 17.19 |
| Zm00001d023615_P001 | Maize | plastid | 21.45 | 17.06 |
| Zm00001d023616_P001 | Maize | plastid | 21.45 | 17.06 |
| Zm00001d010617_P001 | Maize | nucleus | 17.82 | 17.03 |
| Os03t0335200-01 | Rice | nucleus | 17.49 | 16.83 |
| TraesCS2D01G104500.1 | Wheat | nucleus | 19.47 | 16.81 |
| KRH47935 | Soybean | nucleus | 20.46 | 16.8 |
| TraesCS2B01G121800.1 | Wheat | nucleus | 19.14 | 16.71 |
| EER99917 | Sorghum | mitochondrion, nucleus | 19.47 | 16.67 |
| KRH06499 | Soybean | nucleus | 20.46 | 16.62 |
| Os05t0478400-00 | Rice | nucleus | 19.47 | 16.48 |
| TraesCS2B01G121900.1 | Wheat | nucleus | 20.46 | 16.32 |
| HORVU2Hr1G017720.1 | Barley | nucleus, plastid | 19.8 | 16.3 |
| TraesCS2A01G104800.1 | Wheat | nucleus | 18.81 | 16.29 |
| HORVU7Hr1G075960.1 | Barley | nucleus, plastid | 14.52 | 15.02 |
| KRH53718 | Soybean | nucleus | 15.51 | 14.2 |
| KRH64215 | Soybean | nucleus | 14.85 | 13.35 |
Protein Annotations
| EntrezGene:100796599 | MapMan:15.5.22 | Gene3D:2.20.25.80 | EMBL:ACUP02009032 | EnsemblPlantsGene:GLYMA_14G186000 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 |
| UniProt:K7M7W6 | EnsemblPlants:KRH16920 | ProteinID:KRH16920 | ProteinID:KRH16920.1 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR31282 | PANTHER:PTHR31282:SF37 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI000233C0D2 | InterPro:WRKY_dom |
| InterPro:WRKY_dom_sf | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr14:-:45008220..45013133
Molecular Weight (calculated)
33921.7 Da
IEP (calculated)
7.326
GRAVY (calculated)
-0.681
Length
303 amino acids
Sequence
(BLAST)
(BLAST)
001: MNNSLCPESE ISISAKKNRM IMKELVKGQE SATQLKVLLE KPFGSEGSLS CQELTANVLR SFTQAISIIN SSSADEVAHR SLLNSGQNGS PVAVSGENRS
101: QKGGRGRYNR RKSAVSWSIL SCTTDDNHVW RKYGQKGVLN SEFPRSYFRC GHKYDQGCLA KKQVQRDQEN SNMYRTTYIG IHTCNATTKA THSATDLLNS
201: DHDSEVPNVQ DHHISPPSLN IKQTFPKENT PSDVTDHMLN PSMWSALKDF EPSNKPTIVP LMMETDTNNV DNVYSSQRLD MDFRVPSVHF GTDFPFDEGH
301: FLI
101: QKGGRGRYNR RKSAVSWSIL SCTTDDNHVW RKYGQKGVLN SEFPRSYFRC GHKYDQGCLA KKQVQRDQEN SNMYRTTYIG IHTCNATTKA THSATDLLNS
201: DHDSEVPNVQ DHHISPPSLN IKQTFPKENT PSDVTDHMLN PSMWSALKDF EPSNKPTIVP LMMETDTNNV DNVYSSQRLD MDFRVPSVHF GTDFPFDEGH
301: FLI
001: MDSNSNNTKS IKRKVVDQLV EGYEFATQLQ LLLSHQHSNQ YHIDETRLVS GSGSVSGGPD PVDELMSKIL GSFHKTISVL DSFDPVAVSV PIAVEGSWNA
101: SCGDDSATPV SCNGGDSGES KKKRLGVGKG KRGCYTRKTR SHTRIVEAKS SEDRYAWRKY GQKEILNTTF PRSYFRCTHK PTQGCKATKQ VQKQDQDSEM
201: FQITYIGYHT CTANDQTHAK TEPFDQEIIM DSEKTLAAST AQNHVNAMVQ EQENNTSSVT AIDAGMVKEE QNNNGDQSKD YYEGSSTGED LSLVWQETMM
301: FDDHQNHYYC GETSTTSHQF GFIDNDDQFS SFFDSYCADY ERTSAM
101: SCGDDSATPV SCNGGDSGES KKKRLGVGKG KRGCYTRKTR SHTRIVEAKS SEDRYAWRKY GQKEILNTTF PRSYFRCTHK PTQGCKATKQ VQKQDQDSEM
201: FQITYIGYHT CTANDQTHAK TEPFDQEIIM DSEKTLAAST AQNHVNAMVQ EQENNTSSVT AIDAGMVKEE QNNNGDQSKD YYEGSSTGED LSLVWQETMM
301: FDDHQNHYYC GETSTTSHQF GFIDNDDQFS SFFDSYCADY ERTSAM
Arabidopsis Description
WRKY54Probable WRKY transcription factor 54 [Source:UniProtKB/Swiss-Prot;Acc:Q93WU8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.