Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G300500.1 | Wheat | plastid | 87.62 | 87.62 |
| TraesCS1A01G300900.1 | Wheat | nucleus | 85.99 | 85.44 |
| HORVU1Hr1G069620.7 | Barley | nucleus | 79.15 | 81.0 |
| TraesCS1D01G300700.1 | Wheat | nucleus | 65.47 | 66.34 |
| TraesCS2D01G042700.1 | Wheat | nucleus | 45.28 | 47.44 |
| Os05t0478400-00 | Rice | nucleus | 51.47 | 44.13 |
| TraesCS3D01G337500.1 | Wheat | nucleus | 27.69 | 31.48 |
| TraesCS3D01G337600.1 | Wheat | nucleus | 27.69 | 31.37 |
| PGSC0003DMT400070939 | Potato | nucleus | 18.24 | 25.11 |
| PGSC0003DMT400021625 | Potato | nucleus | 16.61 | 23.39 |
| TraesCS1D01G418600.1 | Wheat | nucleus | 17.59 | 21.86 |
| KRH16921 | Soybean | nucleus | 16.94 | 21.67 |
| TraesCS1D01G418000.1 | Wheat | nucleus | 17.26 | 21.54 |
| KRH09521 | Soybean | nucleus | 18.24 | 21.13 |
| TraesCS5D01G190700.1 | Wheat | nucleus | 23.13 | 20.82 |
| TraesCS3D01G337000.1 | Wheat | nucleus | 17.26 | 20.78 |
| TraesCS1D01G418400.1 | Wheat | nucleus | 17.26 | 20.78 |
| TraesCS1D01G418500.1 | Wheat | nucleus | 16.29 | 20.66 |
| TraesCS7D01G345700.1 | Wheat | nucleus | 19.87 | 20.47 |
| TraesCS2D01G489700.1 | Wheat | nucleus | 19.22 | 20.14 |
| TraesCS4D01G172200.1 | Wheat | nucleus | 19.54 | 20.07 |
| TraesCS2D01G104700.1 | Wheat | nucleus | 22.48 | 19.94 |
| TraesCS2D01G104600.1 | Wheat | nucleus | 21.82 | 19.94 |
| TraesCS4D01G178400.1 | Wheat | nucleus | 13.36 | 19.9 |
| KRH21928 | Soybean | nucleus | 17.26 | 19.63 |
| PGSC0003DMT400053122 | Potato | nucleus | 17.59 | 19.49 |
| VIT_13s0067g03140.t01 | Wine grape | nucleus | 19.87 | 19.49 |
| Solyc03g095770.2.1 | Tomato | nucleus | 17.26 | 19.41 |
| GSMUA_Achr5P07490_001 | Banana | endoplasmic reticulum | 21.17 | 19.4 |
| TraesCS4D01G119700.1 | Wheat | nucleus | 14.01 | 19.37 |
| KRH64216 | Soybean | nucleus | 19.87 | 19.24 |
| KRH53716 | Soybean | nucleus | 19.87 | 19.12 |
| TraesCS2D01G168600.1 | Wheat | nucleus | 18.24 | 19.11 |
| TraesCS3D01G238300.1 | Wheat | nucleus | 17.92 | 18.9 |
| TraesCS5D01G190800.1 | Wheat | nucleus | 21.5 | 18.8 |
| KRH00435 | Soybean | nucleus | 18.24 | 18.73 |
| KRH21926 | Soybean | nucleus | 17.92 | 18.58 |
| Solyc09g015770.2.1 | Tomato | extracellular, nucleus | 17.59 | 18.56 |
| PGSC0003DMT400075091 | Potato | nucleus | 17.59 | 18.43 |
| AT3G56400.1 | Thale cress | nucleus | 17.26 | 18.03 |
| KRH40720 | Soybean | nucleus | 17.59 | 18.0 |
| KRH16920 | Soybean | nucleus | 17.59 | 17.82 |
| Bra007243.1-P | Field mustard | nucleus | 15.96 | 17.75 |
| CDY27218 | Canola | nucleus | 15.96 | 17.75 |
| CDX72140 | Canola | nucleus | 15.96 | 17.75 |
| KRH21925 | Soybean | nucleus | 16.94 | 17.69 |
| TraesCS2D01G104500.1 | Wheat | nucleus | 20.2 | 17.66 |
| KRH16918 | Soybean | nucleus | 18.57 | 17.33 |
| Bra014692.1-P | Field mustard | nucleus | 15.96 | 17.19 |
| CDX75992 | Canola | nucleus | 15.96 | 17.19 |
| CDY66845 | Canola | nucleus | 15.96 | 17.07 |
| TraesCS3D01G337100.1 | Wheat | nucleus | 14.66 | 16.85 |
| TraesCS3D01G337400.1 | Wheat | nucleus | 17.59 | 16.77 |
| Bra000203.1-P | Field mustard | nucleus | 18.57 | 16.76 |
| CDY35441 | Canola | nucleus | 18.57 | 16.76 |
| KRH21927 | Soybean | nucleus | 16.29 | 16.67 |
| TraesCS7D01G110600.1 | Wheat | nucleus | 19.87 | 16.58 |
| CDY22474 | Canola | nucleus | 18.24 | 16.47 |
| TraesCS1D01G300600.1 | Wheat | nucleus | 15.31 | 16.38 |
| Bra003239.1-P | Field mustard | nucleus | 14.98 | 16.25 |
| CDX67645 | Canola | nucleus | 14.98 | 16.25 |
| TraesCS1D01G300900.1 | Wheat | nucleus | 14.98 | 15.86 |
| CDY32013 | Canola | nucleus | 14.33 | 15.55 |
| CDX79972 | Canola | nucleus | 16.94 | 15.43 |
| Bra004586.1-P | Field mustard | nucleus | 16.94 | 15.34 |
| CDY23883 | Canola | nucleus | 16.94 | 15.34 |
| TraesCS1D01G300400.1 | Wheat | nucleus | 14.33 | 15.33 |
| KRH64882 | Soybean | nucleus | 11.73 | 15.32 |
| VIT_08s0058g01390.t01 | Wine grape | nucleus | 17.59 | 15.13 |
| AT2G40750.1 | Thale cress | nucleus | 16.61 | 14.74 |
| TraesCS3D01G337300.1 | Wheat | nucleus | 17.59 | 14.4 |
| TraesCS2D01G497600.1 | Wheat | nucleus | 16.94 | 14.36 |
| Bra016974.1-P | Field mustard | nucleus | 15.31 | 14.24 |
| CDY06967 | Canola | nucleus | 15.31 | 14.24 |
| CDY14738 | Canola | nucleus | 14.98 | 13.94 |
| TraesCS6D01G074200.1 | Wheat | nucleus | 17.59 | 13.85 |
| TraesCS2D01G497700.1 | Wheat | nucleus | 15.31 | 13.02 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR31282 | PANTHER:PTHR31282:SF10 | SMART:SM00774 | SUPFAM:SSF118290 | EnsemblPlantsGene:TraesCS1D01G300300 | EnsemblPlants:TraesCS1D01G300300.1 |
| InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr1D:-:398466858..398467871
Molecular Weight (calculated)
33145.9 Da
IEP (calculated)
6.169
GRAVY (calculated)
-0.332
Length
307 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAFVTPAAS VVSELVVRGR ESAALLEALL QGGSPQEHGG LRELAAEILL CCGRALAALH GRAGVDAIAL ASMKRKSSEP YGAAAQTRPK RRMRASSEST
101: ATRVEKRWTA EDGLIWRKYG RKEITHSKHP RLYFRCSYKH DIGCPATRQV QQSDDDLSLY VITYFGDHIC CQGDGAVAAA EREEEDVKKQ PFVINFGSAT
201: ASSTSGSPWQ NSDGGDGRSK ISRSPHAVCL PEGRAELGLK VTKVETTSLD SQPAGPAAAD LSSSPDVSCP SPAWDPLSCC LEWDQFIESS FDFVGEFINF
301: DGITLYQ
101: ATRVEKRWTA EDGLIWRKYG RKEITHSKHP RLYFRCSYKH DIGCPATRQV QQSDDDLSLY VITYFGDHIC CQGDGAVAAA EREEEDVKKQ PFVINFGSAT
201: ASSTSGSPWQ NSDGGDGRSK ISRSPHAVCL PEGRAELGLK VTKVETTSLD SQPAGPAAAD LSSSPDVSCP SPAWDPLSCC LEWDQFIESS FDFVGEFINF
301: DGITLYQ
001: MEMMNWERRS LLNELIHGLK AAKQLQAILM LNGSTTQHNP TIELAPDPLA HPGKVPGSPA SITGNPRSEE FFNVRSKEFN LSSKKRKMLP KWTEQVRISP
101: ERGLEGPHDD IFSWRKYGQK DILGAKFPRS YYRCTFRNTQ YCWATKQVQR SDGDPTIFEV TYRGTHTCSQ GIPLPEKRET KPKHTVAVNY QNLRASLTVR
201: TGGLGSEAFS FPVTSPLYTY ESINGGGTFY HHVGSSGPSD FTGLISTNTS TGSSPIFDVN FQFDPTAEIN TGFPTFFHNS I
101: ERGLEGPHDD IFSWRKYGQK DILGAKFPRS YYRCTFRNTQ YCWATKQVQR SDGDPTIFEV TYRGTHTCSQ GIPLPEKRET KPKHTVAVNY QNLRASLTVR
201: TGGLGSEAFS FPVTSPLYTY ESINGGGTFY HHVGSSGPSD FTGLISTNTS TGSSPIFDVN FQFDPTAEIN TGFPTFFHNS I
Arabidopsis Description
WRKY41Probable WRKY transcription factor 41 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0Y8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.