Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Solyc06g075780.1.1 | |
| Solyc11g073060.1.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G56400.1 | Solyc06g075780.1.1 | AT3G46090.1 | 17259181 |
| AT3G56400.1 | Solyc11g073060.1.1 | AT3G46090.1 | 17259181 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400053122 | Potato | nucleus | 93.04 | 91.7 |
| VIT_13s0067g03140.t01 | Wine grape | nucleus | 36.26 | 31.63 |
| KRH64216 | Soybean | nucleus | 35.53 | 30.6 |
| KRH16921 | Soybean | nucleus | 26.01 | 29.58 |
| Solyc09g015770.2.1 | Tomato | extracellular, nucleus | 31.5 | 29.55 |
| KRH53716 | Soybean | nucleus | 34.07 | 29.15 |
| KRH16920 | Soybean | nucleus | 31.87 | 28.71 |
| KRH16918 | Soybean | nucleus | 34.07 | 28.27 |
| Solyc05g050310.1.1 | Tomato | cytosol, nucleus | 5.86 | 27.12 |
| TraesCS7B01G249700.1 | Wheat | nucleus | 21.61 | 21.53 |
| Solyc10g009550.2.1 | Tomato | nucleus | 21.98 | 20.69 |
| CDX72140 | Canola | nucleus | 20.88 | 20.65 |
| Solyc05g050330.2.1 | Tomato | nucleus | 18.32 | 20.49 |
| AT3G56400.1 | Thale cress | nucleus | 21.98 | 20.41 |
| CDY27218 | Canola | nucleus | 20.51 | 20.29 |
| Bra007243.1-P | Field mustard | nucleus | 20.51 | 20.29 |
| EES01669 | Sorghum | nucleus | 20.15 | 19.86 |
| TraesCS7D01G345700.1 | Wheat | nucleus | 21.61 | 19.8 |
| Bra003239.1-P | Field mustard | nucleus | 20.51 | 19.79 |
| CDX75992 | Canola | nucleus | 20.51 | 19.65 |
| Bra014692.1-P | Field mustard | nucleus | 20.51 | 19.65 |
| Solyc01g095630.2.1 | Tomato | nucleus | 24.18 | 19.64 |
| HORVU0Hr1G030830.1 | Barley | nucleus, plastid | 20.15 | 19.64 |
| CDX67645 | Canola | nucleus | 20.15 | 19.43 |
| Os05t0478800-00 | Rice | nucleus | 15.75 | 19.28 |
| CDY66845 | Canola | nucleus | 20.15 | 19.16 |
| CDY32013 | Canola | nucleus | 19.78 | 19.08 |
| HORVU7Hr1G083270.2 | Barley | nucleus | 21.25 | 18.83 |
| TraesCS2D01G489700.1 | Wheat | nucleus | 20.15 | 18.77 |
| TraesCS2A01G489500.1 | Wheat | nucleus | 20.15 | 18.71 |
| Os01t0821600-01 | Rice | nucleus | 19.05 | 18.57 |
| Zm00001d043060_P001 | Maize | nucleus | 19.41 | 18.53 |
| TraesCS1D01G300700.1 | Wheat | nucleus | 20.51 | 18.48 |
| TraesCS2B01G517400.1 | Wheat | nucleus | 19.78 | 18.18 |
| CDY14738 | Canola | nucleus | 21.98 | 18.18 |
| TraesCS1A01G301100.1 | Wheat | plastid | 20.15 | 18.15 |
| TraesCS1A01G300900.1 | Wheat | nucleus | 20.51 | 18.12 |
| Os05t0322900-01 | Rice | nucleus | 21.61 | 18.1 |
| TraesCS3D01G337600.1 | Wheat | nucleus | 17.95 | 18.08 |
| Solyc08g082110.2.1 | Tomato | nucleus | 22.34 | 17.99 |
| EES15768 | Sorghum | nucleus | 21.98 | 17.96 |
| Bra016974.1-P | Field mustard | nucleus | 21.61 | 17.88 |
| HORVU2Hr1G109330.1 | Barley | mitochondrion, nucleus, vacuole | 21.25 | 17.85 |
| TraesCS3B01G375800.1 | Wheat | nucleus | 17.58 | 17.84 |
| Zm00001d012505_P001 | Maize | nucleus | 17.22 | 17.8 |
| HORVU4Hr1G050320.2 | Barley | nucleus | 19.41 | 17.79 |
| HORVU1Hr1G069620.7 | Barley | nucleus | 19.41 | 17.67 |
| TraesCS3A01G343900.1 | Wheat | nucleus | 17.58 | 17.58 |
| CDY06967 | Canola | nucleus | 21.25 | 17.58 |
| HORVU3Hr1G080980.1 | Barley | nucleus | 15.75 | 17.55 |
| Solyc05g050300.1.1 | Tomato | nucleus | 12.45 | 17.44 |
| Solyc05g050340.2.1 | Tomato | nucleus | 20.88 | 17.43 |
| TraesCS4D01G172200.1 | Wheat | nucleus | 19.05 | 17.39 |
| CDY22474 | Canola | nucleus | 21.61 | 17.35 |
| TraesCS2A01G043600.1 | Wheat | nucleus | 17.58 | 17.33 |
| GSMUA_Achr5P07490_001 | Banana | endoplasmic reticulum | 21.25 | 17.31 |
| TraesCS3A01G343700.1 | Wheat | nucleus | 17.22 | 17.28 |
| TraesCS3B01G375700.1 | Wheat | nucleus | 17.22 | 17.28 |
| TraesCS1D01G300300.1 | Wheat | nucleus | 19.41 | 17.26 |
| TraesCS1D01G300500.1 | Wheat | plastid | 19.41 | 17.26 |
| TraesCS4B01G170100.1 | Wheat | nucleus | 19.05 | 17.22 |
| TraesCS2B01G056300.1 | Wheat | nucleus | 17.58 | 17.08 |
| TraesCS3D01G337500.1 | Wheat | nucleus | 16.85 | 17.04 |
| TraesCS2D01G104600.1 | Wheat | nucleus | 20.88 | 16.96 |
| Bra004586.1-P | Field mustard | nucleus | 20.88 | 16.81 |
| CDY35441 | Canola | nucleus | 20.88 | 16.76 |
| Bra000203.1-P | Field mustard | nucleus | 20.88 | 16.76 |
| AT2G40750.1 | Thale cress | nucleus | 21.25 | 16.76 |
| Solyc08g008280.2.1 | Tomato | nucleus | 21.98 | 16.67 |
| CDX79972 | Canola | nucleus | 20.51 | 16.62 |
| TraesCS2A01G104900.1 | Wheat | nucleus | 20.51 | 16.62 |
| CDY23883 | Canola | nucleus | 20.51 | 16.52 |
| Os05t0478400-00 | Rice | nucleus | 21.61 | 16.48 |
| TraesCS2D01G042700.1 | Wheat | nucleus | 17.58 | 16.38 |
| TraesCS7A01G338500.1 | Wheat | nucleus, plastid | 21.98 | 16.35 |
| TraesCS2D01G104700.1 | Wheat | nucleus | 20.51 | 16.18 |
| Solyc03g007380.1.1 | Tomato | nucleus | 20.88 | 16.15 |
| Zm00001d047523_P001 | Maize | nucleus | 19.05 | 16.0 |
| Zm00001d022437_P001 | Maize | mitochondrion, nucleus | 19.78 | 15.98 |
| TraesCS2A01G043700.1 | Wheat | nucleus | 15.75 | 15.81 |
| Zm00001d010617_P001 | Maize | nucleus | 18.32 | 15.77 |
| Solyc06g048870.1.1 | Tomato | nucleus, vacuole | 13.92 | 15.64 |
| TraesCS2B01G056400.1 | Wheat | nucleus, plastid | 16.48 | 15.62 |
| Os07t0680400-01 | Rice | nucleus | 19.05 | 15.62 |
| Zm00001d023616_P001 | Maize | plastid | 21.61 | 15.49 |
| Zm00001d023615_P001 | Maize | plastid | 21.61 | 15.49 |
| HORVU2Hr1G006600.1 | Barley | nucleus | 17.95 | 15.26 |
| EER99917 | Sorghum | mitochondrion, nucleus | 19.78 | 15.25 |
| Os03t0335200-01 | Rice | nucleus | 17.58 | 15.24 |
| TraesCS2A01G043800.1 | Wheat | nucleus | 16.48 | 15.2 |
| HORVU3Hr1G081030.3 | Barley | nucleus | 17.58 | 15.0 |
| TraesCS4A01G135000.1 | Wheat | nucleus | 13.92 | 14.96 |
| HORVU2Hr1G017740.3 | Barley | nucleus | 18.68 | 14.66 |
| TraesCS2B01G121900.1 | Wheat | nucleus | 20.15 | 14.47 |
| EER94905 | Sorghum | nucleus | 17.22 | 14.33 |
| TraesCS2D01G104500.1 | Wheat | nucleus | 18.32 | 14.24 |
| TraesCS2B01G121800.1 | Wheat | nucleus | 17.95 | 14.12 |
| TraesCS2A01G104800.1 | Wheat | nucleus | 17.58 | 13.71 |
| HORVU2Hr1G017720.1 | Barley | nucleus, plastid | 17.95 | 13.32 |
| HORVU7Hr1G075960.1 | Barley | nucleus, plastid | 13.92 | 12.97 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | UniProt:K4BIZ9 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR31282 | PANTHER:PTHR31282:SF17 | SMART:SM00774 | SUPFAM:SSF118290 | EnsemblPlantsGene:Solyc03g095770.2 | EnsemblPlants:Solyc03g095770.2.1 |
| UniParc:UPI0002767A15 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : |
Description
No Description!
Coordinates
chr3:+:56974715..56976889
Molecular Weight (calculated)
31534.8 Da
IEP (calculated)
6.423
GRAVY (calculated)
-0.949
Length
273 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDFLGENPH NRLIKELVEG KSFTVQLQTL LKQPNESVLA EELIRKIWGS FTQAITVLNS LGNSDNSLTQ GQIEEVDQPN SGSELKKKKK EKQDRRGCYK
101: RRKTSGSWMR ESATMNDGCA WRKYGQKKIL NSKYPRCYYR CTHKYDQECR ATKQVQIIQE NPIIMYHTTY FGNHTCNPTK IPKHTYNNHA MVKHSDSTVL
201: KEEEEEEESK GQSDNASSIV DSNLWQDFMP SSPSAHDSTM AANYNSSYYE EIISSHDMED WAKFGEIEAI EFC
101: RRKTSGSWMR ESATMNDGCA WRKYGQKKIL NSKYPRCYYR CTHKYDQECR ATKQVQIIQE NPIIMYHTTY FGNHTCNPTK IPKHTYNNHA MVKHSDSTVL
201: KEEEEEEESK GQSDNASSIV DSNLWQDFMP SSPSAHDSTM AANYNSSYYE EIISSHDMED WAKFGEIEAI EFC
001: MDTNKAKKLK VMNQLVEGHD LTTQLQQLLS QPGSGLEDLV AKILVCFNNT ISVLDTFEPI SSSSSLAAVE GSQNASCDND GKFEDSGDSR KRLGPVKGKR
101: GCYKRKKRSE TCTIESTILE DAFSWRKYGQ KEILNAKFPR SYFRCTHKYT QGCKATKQVQ KVELEPKMFS ITYIGNHTCN TNAETPKSKT CDHHDEIFMD
201: SEDHKSPSLS TSMKEEDNPH RHHGSSTEND LSLVWPEMVF EEDYHHQASY VNGKTSTSID VLGSQDLMVF GGGGDFEFSE NEHFSIFSSC SNLS
101: GCYKRKKRSE TCTIESTILE DAFSWRKYGQ KEILNAKFPR SYFRCTHKYT QGCKATKQVQ KVELEPKMFS ITYIGNHTCN TNAETPKSKT CDHHDEIFMD
201: SEDHKSPSLS TSMKEEDNPH RHHGSSTEND LSLVWPEMVF EEDYHHQASY VNGKTSTSID VLGSQDLMVF GGGGDFEFSE NEHFSIFSSC SNLS
Arabidopsis Description
WRKY70Probable WRKY transcription factor 70 [Source:UniProtKB/Swiss-Prot;Acc:Q9LY00]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.