Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G121800.1 | Wheat | nucleus | 83.15 | 88.18 |
| HORVU7Hr1G075960.1 | Barley | nucleus, plastid | 69.57 | 87.37 |
| TraesCS2D01G104500.1 | Wheat | nucleus | 82.61 | 86.61 |
| TraesCS2A01G104800.1 | Wheat | nucleus | 81.52 | 85.71 |
| HORVU2Hr1G017740.3 | Barley | nucleus | 65.22 | 68.97 |
| Zm00001d022437_P001 | Maize | mitochondrion, nucleus | 45.11 | 49.11 |
| EER99917 | Sorghum | mitochondrion, nucleus | 44.84 | 46.61 |
| Os07t0680400-01 | Rice | nucleus | 41.58 | 45.95 |
| HORVU4Hr1G050320.2 | Barley | nucleus | 35.05 | 43.29 |
| HORVU4Hr1G051970.1 | Barley | nucleus | 9.51 | 28.0 |
| HORVU7Hr1G083270.2 | Barley | nucleus | 23.1 | 27.6 |
| HORVU0Hr1G030830.1 | Barley | nucleus, plastid | 19.57 | 25.71 |
| PGSC0003DMT400021625 | Potato | nucleus | 14.95 | 25.23 |
| HORVU2Hr1G109330.1 | Barley | mitochondrion, nucleus, vacuole | 21.74 | 24.62 |
| HORVU6Hr1G013890.3 | Barley | nucleus | 14.67 | 24.43 |
| HORVU4Hr1G052010.2 | Barley | nucleus | 13.04 | 23.3 |
| HORVU4Hr1G022970.2 | Barley | nucleus, plastid | 17.66 | 23.3 |
| HORVU1Hr1G090170.1 | Barley | nucleus | 15.22 | 22.67 |
| HORVU1Hr1G090110.1 | Barley | nucleus | 15.49 | 22.53 |
| PGSC0003DMT400070939 | Potato | nucleus | 13.59 | 22.42 |
| HORVU1Hr1G090190.2 | Barley | nucleus | 15.22 | 22.05 |
| GSMUA_Achr5P07490_001 | Banana | endoplasmic reticulum | 19.84 | 21.79 |
| VIT_13s0067g03140.t01 | Wine grape | nucleus | 18.48 | 21.73 |
| HORVU1Hr1G090130.4 | Barley | nucleus | 15.22 | 21.54 |
| HORVU1Hr1G069620.7 | Barley | nucleus | 17.39 | 21.33 |
| KRH09521 | Soybean | nucleus | 15.22 | 21.13 |
| KRH53716 | Soybean | nucleus | 18.21 | 21.0 |
| KRH64216 | Soybean | nucleus | 17.93 | 20.82 |
| HORVU2Hr1G029430.2 | Barley | mitochondrion, nucleus | 13.59 | 20.49 |
| KRH16921 | Soybean | nucleus | 13.32 | 20.42 |
| KRH00435 | Soybean | nucleus | 16.58 | 20.4 |
| HORVU3Hr1G080980.1 | Barley | nucleus | 13.32 | 20.0 |
| KRH21928 | Soybean | nucleus | 14.67 | 20.0 |
| KRH21926 | Soybean | nucleus | 16.03 | 19.93 |
| KRH16920 | Soybean | nucleus | 16.3 | 19.8 |
| KRH21925 | Soybean | nucleus | 15.76 | 19.73 |
| Solyc09g015770.2.1 | Tomato | extracellular, nucleus | 15.49 | 19.59 |
| HORVU3Hr1G059220.1 | Barley | nucleus | 16.3 | 19.48 |
| PGSC0003DMT400075091 | Potato | nucleus | 15.49 | 19.45 |
| KRH21927 | Soybean | nucleus | 15.76 | 19.33 |
| AT3G56400.1 | Thale cress | nucleus | 15.22 | 19.05 |
| KRH40720 | Soybean | nucleus | 15.22 | 18.67 |
| HORVU3Hr1G059210.1 | Barley | nucleus | 12.23 | 18.44 |
| HORVU1Hr1G069640.2 | Barley | nucleus | 14.67 | 18.43 |
| HORVU5Hr1G034830.3 | Barley | nucleus | 16.58 | 18.37 |
| HORVU3Hr1G080890.1 | Barley | nucleus, plastid, vacuole | 14.67 | 18.37 |
| KRH64882 | Soybean | nucleus | 11.68 | 18.3 |
| CDY27218 | Canola | nucleus | 13.59 | 18.12 |
| Bra007243.1-P | Field mustard | nucleus | 13.59 | 18.12 |
| CDX72140 | Canola | nucleus | 13.59 | 18.12 |
| HORVU3Hr1G058670.1 | Barley | nucleus | 12.23 | 18.07 |
| HORVU3Hr1G080860.1 | Barley | nucleus | 12.5 | 17.97 |
| Solyc03g095770.2.1 | Tomato | nucleus | 13.32 | 17.95 |
| HORVU3Hr1G081000.3 | Barley | plastid | 9.51 | 17.68 |
| CDY32013 | Canola | nucleus | 13.59 | 17.67 |
| CDX75992 | Canola | nucleus | 13.59 | 17.54 |
| Bra014692.1-P | Field mustard | nucleus | 13.59 | 17.54 |
| HORVU2Hr1G006600.1 | Barley | nucleus | 15.22 | 17.45 |
| Bra003239.1-P | Field mustard | nucleus | 13.32 | 17.31 |
| HORVU1Hr1G069610.1 | Barley | nucleus | 13.59 | 17.3 |
| VIT_08s0058g01390.t01 | Wine grape | nucleus | 16.58 | 17.09 |
| KRH16918 | Soybean | nucleus | 15.22 | 17.02 |
| PGSC0003DMT400053122 | Potato | nucleus | 12.77 | 16.97 |
| CDX67645 | Canola | nucleus | 13.04 | 16.96 |
| CDY66845 | Canola | nucleus | 13.04 | 16.72 |
| HORVU5Hr1G056130.2 | Barley | nucleus | 17.39 | 16.33 |
| HORVU0Hr1G012750.1 | Barley | nucleus | 14.67 | 16.27 |
| HORVU3Hr1G081030.3 | Barley | nucleus | 14.13 | 16.25 |
| HORVU0Hr1G023420.1 | Barley | nucleus, plastid | 13.59 | 16.03 |
| CDY22474 | Canola | nucleus | 14.4 | 15.59 |
| Bra000203.1-P | Field mustard | nucleus | 14.13 | 15.29 |
| CDY35441 | Canola | nucleus | 14.13 | 15.29 |
| HORVU0Hr1G012740.1 | Barley | nucleus | 13.32 | 15.17 |
| CDY14738 | Canola | nucleus | 13.59 | 15.15 |
| CDX79972 | Canola | nucleus | 13.86 | 15.13 |
| Bra004586.1-P | Field mustard | nucleus | 13.86 | 15.04 |
| Bra016974.1-P | Field mustard | nucleus | 13.32 | 14.85 |
| CDY06967 | Canola | nucleus | 13.32 | 14.85 |
| CDY23883 | Canola | nucleus | 13.59 | 14.75 |
| AT2G40750.1 | Thale cress | nucleus | 13.59 | 14.45 |
| HORVU3Hr1G080960.1 | Barley | nucleus | 13.32 | 13.61 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | UniProt:A0A287H7V6 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:HORVU2Hr1G017720 | EnsemblPlants:HORVU2Hr1G017720.1 | InterPro:IPR003657 | InterPro:IPR036576 |
| PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31282 | PANTHER:PTHR31282:SF19 | SMART:SM00774 | SUPFAM:SSF118290 |
| UniParc:UPI000B47E24A | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr2H:+:44541762..44544834
Molecular Weight (calculated)
38222.4 Da
IEP (calculated)
7.894
GRAVY (calculated)
-0.368
Length
368 amino acids
Sequence
(BLAST)
(BLAST)
001: SSSTTARASL PLSAAGMASS GGGRSPVTAV LDDLVDVRDR VAVLQTVLHE SSPGPTTVEA GELVDGMMAK LSSAFSVVLG TGDGGVASSL SGAGRGPSGR
101: RKRPGAASSG PHRRSSPRGR MKSPLSRTVT ATTLTDGKSW RKYGQKQIHD STNPRSYYRC THLPDQGCKA KRHVQQSESN PTEYTMDYYG QHTCRDPSTF
201: PSLIVQSAAA APPPDCANLI SFAPINGANS GFTASTSTSA FAHHLMKEAA DHHPMLFSRF SNYYSSSPPA QEGVSSGSPS PACHGKFMQY GAGGQFINVT
301: GLRTSPLTVG SAPAEYWPVV GVAGVDMDAG AGMDSFPSPP SSPGFLSGSL EGSFGNNVCD DDLFSFDS
101: RKRPGAASSG PHRRSSPRGR MKSPLSRTVT ATTLTDGKSW RKYGQKQIHD STNPRSYYRC THLPDQGCKA KRHVQQSESN PTEYTMDYYG QHTCRDPSTF
201: PSLIVQSAAA APPPDCANLI SFAPINGANS GFTASTSTSA FAHHLMKEAA DHHPMLFSRF SNYYSSSPPA QEGVSSGSPS PACHGKFMQY GAGGQFINVT
301: GLRTSPLTVG SAPAEYWPVV GVAGVDMDAG AGMDSFPSPP SSPGFLSGSL EGSFGNNVCD DDLFSFDS
001: MNSCQQKAME KLLHGHGCAN QLLIMDQTES DSSMEREDLA KSVLHCFSDA LSILIDTNDH QDDQSNNSSP QDSSPVLESS RKPLHKRGRK TSMAESSDYH
101: RHESSTPIYH DGFLWRKYGQ KQIKESEYQR SYYKCAYTKD QNCEAKKQVQ KIQHNPPLYS TTYFGQHICQ LHQAYATFPI DTSDFEEHEG SHMIRFGHPN
201: ISFSSSTSNL RQHQNHQDRI KDEYMKPVIA EDWSPSQWMS SEVALAVEAF EFNPFWTSHD LSS
101: RHESSTPIYH DGFLWRKYGQ KQIKESEYQR SYYKCAYTKD QNCEAKKQVQ KIQHNPPLYS TTYFGQHICQ LHQAYATFPI DTSDFEEHEG SHMIRFGHPN
201: ISFSSSTSNL RQHQNHQDRI KDEYMKPVIA EDWSPSQWMS SEVALAVEAF EFNPFWTSHD LSS
Arabidopsis Description
WRKY62WRKY62 [Source:UniProtKB/TrEMBL;Acc:A0A178U8T9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.