Skip to main content
crop-pal logo
Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, nucleus, vacuole

Predictor Summary:
  • plastid 1
  • nucleus 1
  • mitochondrion 1
  • vacuole 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU0Hr1G030830.1 Barley nucleus, plastid 77.85 90.36
TraesCS2D01G489700.1 Wheat nucleus 77.85 86.35
TraesCS2B01G517400.1 Wheat nucleus 76.31 83.5
TraesCS2A01G489500.1 Wheat nucleus 75.08 82.99
HORVU7Hr1G083270.2 Barley nucleus 59.38 62.66
Os05t0322900-01 Rice nucleus 47.69 47.55
EES15768 Sorghum nucleus 48.31 47.01
Zm00001d023616_P001 Maize plastid 45.85 39.11
Zm00001d023615_P001 Maize plastid 45.85 39.11
HORVU4Hr1G050320.2 Barley nucleus 25.54 27.85
HORVU4Hr1G051970.1 Barley nucleus 10.46 27.2
PGSC0003DMT400070939 Potato nucleus 18.46 26.91
KRH16921 Soybean nucleus 19.38 26.25
PGSC0003DMT400021625 Potato nucleus 17.54 26.15
GSMUA_Achr5P07490_001 Banana endoplasmic reticulum 26.15 25.37
KRH09521 Soybean nucleus 20.62 25.28
HORVU1Hr1G069620.7 Barley nucleus 20.92 22.67
KRH21928 Soybean nucleus 18.46 22.22
HORVU2Hr1G029430.2 Barley mitochondrion, nucleus 16.62 22.13
HORVU2Hr1G017740.3 Barley nucleus 23.69 22.13
HORVU7Hr1G075960.1 Barley nucleus, plastid 19.69 21.84
HORVU2Hr1G017720.1 Barley nucleus, plastid 24.62 21.74
PGSC0003DMT400053122 Potato nucleus 18.15 21.3
Solyc03g095770.2.1 Tomato nucleus 17.85 21.25
KRH16920 Soybean nucleus 19.69 21.12
KRH53716 Soybean nucleus 20.62 21.0
KRH64216 Soybean nucleus 20.31 20.82
KRH00435 Soybean nucleus 18.77 20.4
HORVU6Hr1G013890.3 Barley nucleus 13.85 20.36
KRH21927 Soybean nucleus 18.77 20.33
HORVU1Hr1G090110.1 Barley nucleus 15.69 20.16
VIT_13s0067g03140.t01 Wine grape nucleus 19.38 20.13
HORVU3Hr1G059210.1 Barley nucleus 15.08 20.08
HORVU1Hr1G090130.4 Barley nucleus 16.0 20.0
Solyc09g015770.2.1 Tomato extracellular, nucleus 17.85 19.93
HORVU1Hr1G090170.1 Barley nucleus 15.08 19.84
HORVU1Hr1G090190.2 Barley nucleus 15.38 19.68
KRH40720 Soybean nucleus 18.15 19.67
CDX72140 Canola nucleus 16.62 19.57
CDY66845 Canola nucleus 17.23 19.51
HORVU4Hr1G052010.2 Barley nucleus 12.31 19.42
KRH21925 Soybean nucleus 17.54 19.39
Bra014692.1-P Field mustard nucleus 16.92 19.3
CDX75992 Canola nucleus 16.92 19.3
HORVU5Hr1G034830.3 Barley nucleus 19.69 19.28
KRH16918 Soybean nucleus 19.38 19.15
PGSC0003DMT400075091 Potato nucleus 17.23 19.11
Bra003239.1-P Field mustard nucleus 16.62 19.08
KRH21926 Soybean nucleus 17.23 18.92
KRH64882 Soybean nucleus 13.54 18.72
HORVU0Hr1G012740.1 Barley nucleus 18.46 18.58
HORVU3Hr1G059220.1 Barley nucleus 17.54 18.51
CDY27218 Canola nucleus 15.69 18.48
Bra007243.1-P Field mustard nucleus 15.69 18.48
HORVU2Hr1G006600.1 Barley nucleus 18.15 18.38
CDY32013 Canola nucleus 16.0 18.37
CDX67645 Canola nucleus 16.0 18.37
AT3G56400.1 Thale cress nucleus 16.62 18.37
HORVU3Hr1G081000.3 Barley plastid 11.08 18.18
CDX79972 Canola nucleus 18.77 18.1
Bra004586.1-P Field mustard nucleus 18.77 17.99
CDY23883 Canola nucleus 18.77 17.99
VIT_08s0058g01390.t01 Wine grape nucleus 19.69 17.93
CDY06967 Canola nucleus 17.85 17.58
HORVU4Hr1G022970.2 Barley nucleus, plastid 15.08 17.56
Bra016974.1-P Field mustard nucleus 17.54 17.27
CDY14738 Canola nucleus 17.54 17.27
HORVU3Hr1G081030.3 Barley nucleus 16.92 17.19
HORVU3Hr1G080980.1 Barley nucleus 12.92 17.14
CDY22474 Canola nucleus 17.85 17.06
AT2G40750.1 Thale cress nucleus 18.15 17.05
HORVU5Hr1G056130.2 Barley nucleus 20.31 16.84
CDY35441 Canola nucleus 17.54 16.76
Bra000203.1-P Field mustard nucleus 17.54 16.76
HORVU3Hr1G080860.1 Barley nucleus 12.92 16.41
HORVU1Hr1G069640.2 Barley nucleus 14.77 16.38
HORVU0Hr1G012750.1 Barley nucleus 16.0 15.66
HORVU3Hr1G058670.1 Barley nucleus 12.0 15.66
HORVU3Hr1G080890.1 Barley nucleus, plastid, vacuole 12.92 14.29
HORVU1Hr1G069610.1 Barley nucleus 12.62 14.19
HORVU3Hr1G080960.1 Barley nucleus 15.69 14.17
HORVU0Hr1G023420.1 Barley nucleus, plastid 12.62 13.14
Protein Annotations
MapMan:15.5.22Gene3D:2.20.25.80UniProt:A0A287JE57GO:GO:0003674GO:GO:0003676GO:GO:0003677
GO:GO:0003700GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634
GO:GO:0006139GO:GO:0006351GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987GO:GO:0043565EnsemblPlantsGene:HORVU2Hr1G109330EnsemblPlants:HORVU2Hr1G109330.1InterPro:IPR003657InterPro:IPR036576
PFAM:PF03106PFscan:PS50811PANTHER:PTHR31282PANTHER:PTHR31282:SF14SMART:SM00774SUPFAM:SSF118290
UniParc:UPI000B474779InterPro:WRKY_domInterPro:WRKY_dom_sfSEG:seg::
Description
No Description!
Coordinates
chrchr2H:-:716404110..716405772
Molecular Weight (calculated)
34714.7 Da
IEP (calculated)
7.542
GRAVY (calculated)
-0.434
Length
325 amino acids
Sequence
(BLAST)
001: SSPSALALLL CGAVRARWSR SELEFTCSCL DRSMAMAPYE QVVDDLAKGQ EFATQLQGLL RDSPKAGLIM DQILHTFSRA IHAAKAAAAA SASASSGSEV
101: TDGATSGGKR KSAAGGGPRK ACRTRTHDSS VVTKKMKSLE DGQTWRKYGQ KEIQNSKHSK AYFRCTHKYD QQCPARRQAQ RCDEDPDTYR VTYIGVHTCQ
201: DPAAAVAPHA PHLTGGCHLI SFAPAAAHVL PTTSTTTTNT NLVDQDAAAR GSGLRLPGLK LEGGDLEEVL SSRTPGSSAL HGAATWPDQG DVTSTLQYGL
301: GQGDLFLDGY TYLEDFMPLP YGLDH
Best Arabidopsis Sequence Match ( AT3G56400.1 )
(BLAST)
001: MDTNKAKKLK VMNQLVEGHD LTTQLQQLLS QPGSGLEDLV AKILVCFNNT ISVLDTFEPI SSSSSLAAVE GSQNASCDND GKFEDSGDSR KRLGPVKGKR
101: GCYKRKKRSE TCTIESTILE DAFSWRKYGQ KEILNAKFPR SYFRCTHKYT QGCKATKQVQ KVELEPKMFS ITYIGNHTCN TNAETPKSKT CDHHDEIFMD
201: SEDHKSPSLS TSMKEEDNPH RHHGSSTEND LSLVWPEMVF EEDYHHQASY VNGKTSTSID VLGSQDLMVF GGGGDFEFSE NEHFSIFSSC SNLS
Arabidopsis Description
WRKY70Probable WRKY transcription factor 70 [Source:UniProtKB/Swiss-Prot;Acc:Q9LY00]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.