Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra016974.1-P | Field mustard | nucleus | 70.23 | 73.64 |
| CDY23883 | Canola | nucleus | 71.68 | 73.16 |
| CDY14738 | Canola | nucleus | 69.65 | 73.03 |
| CDY06967 | Canola | nucleus | 69.36 | 72.73 |
| CDX79972 | Canola | nucleus | 70.81 | 72.7 |
| Bra004586.1-P | Field mustard | nucleus | 70.81 | 72.27 |
| CDY35441 | Canola | nucleus | 70.81 | 72.06 |
| Bra000203.1-P | Field mustard | nucleus | 70.81 | 72.06 |
| CDY22474 | Canola | nucleus | 69.94 | 71.18 |
| AT3G56400.1 | Thale cress | nucleus | 44.51 | 52.38 |
| PGSC0003DMT400021625 | Potato | nucleus | 17.34 | 27.52 |
| PGSC0003DMT400070939 | Potato | nucleus | 15.61 | 24.22 |
| KRH16921 | Soybean | nucleus | 16.47 | 23.75 |
| TraesCS7B01G249700.1 | Wheat | nucleus | 18.5 | 23.36 |
| KRH64216 | Soybean | nucleus | 19.94 | 21.77 |
| VIT_13s0067g03140.t01 | Wine grape | nucleus | 19.65 | 21.73 |
| KRH09521 | Soybean | nucleus | 16.47 | 21.51 |
| KRH53716 | Soybean | nucleus | 19.65 | 21.32 |
| PGSC0003DMT400053122 | Potato | nucleus | 17.05 | 21.3 |
| Solyc03g095770.2.1 | Tomato | nucleus | 16.76 | 21.25 |
| TraesCS2A01G489500.1 | Wheat | nucleus | 17.34 | 20.41 |
| TraesCS2D01G489700.1 | Wheat | nucleus | 17.05 | 20.14 |
| TraesCS7D01G345700.1 | Wheat | nucleus | 17.34 | 20.13 |
| HORVU7Hr1G083270.2 | Barley | nucleus | 17.92 | 20.13 |
| KRH16918 | Soybean | nucleus | 19.08 | 20.06 |
| HORVU0Hr1G030830.1 | Barley | nucleus, plastid | 16.18 | 20.0 |
| KRH40720 | Soybean | nucleus | 17.34 | 20.0 |
| TraesCS2B01G517400.1 | Wheat | nucleus | 17.05 | 19.87 |
| KRH16920 | Soybean | nucleus | 17.34 | 19.8 |
| KRH00435 | Soybean | nucleus | 17.05 | 19.73 |
| Os05t0478800-00 | Rice | nucleus | 12.72 | 19.73 |
| KRH21928 | Soybean | nucleus | 15.32 | 19.63 |
| PGSC0003DMT400075091 | Potato | nucleus | 16.47 | 19.45 |
| KRH21926 | Soybean | nucleus | 16.47 | 19.26 |
| Solyc09g015770.2.1 | Tomato | extracellular, nucleus | 16.18 | 19.24 |
| Os05t0322900-01 | Rice | nucleus | 17.92 | 19.02 |
| AT2G40740.3 | Thale cress | nucleus | 16.18 | 18.6 |
| TraesCS4D01G172200.1 | Wheat | nucleus | 15.9 | 18.39 |
| KRH64882 | Soybean | nucleus | 12.43 | 18.3 |
| TraesCS4B01G170100.1 | Wheat | nucleus | 15.9 | 18.21 |
| HORVU2Hr1G109330.1 | Barley | mitochondrion, nucleus, vacuole | 17.05 | 18.15 |
| TraesCS1D01G300700.1 | Wheat | nucleus | 15.9 | 18.15 |
| TraesCS1A01G300900.1 | Wheat | nucleus | 16.18 | 18.12 |
| HORVU4Hr1G050320.2 | Barley | nucleus | 15.61 | 18.12 |
| AT4G11070.1 | Thale cress | nucleus | 16.18 | 17.89 |
| TraesCS1A01G301100.1 | Wheat | plastid | 15.61 | 17.82 |
| KRH21925 | Soybean | nucleus | 15.03 | 17.69 |
| HORVU1Hr1G069620.7 | Barley | nucleus | 15.32 | 17.67 |
| AT4G23810.1 | Thale cress | nucleus | 16.47 | 17.59 |
| TraesCS1D01G300500.1 | Wheat | plastid | 15.61 | 17.59 |
| Os07t0680400-01 | Rice | nucleus | 16.76 | 17.42 |
| EES15768 | Sorghum | nucleus | 16.76 | 17.37 |
| AT2G46400.1 | Thale cress | nucleus | 14.74 | 17.29 |
| TraesCS7A01G338500.1 | Wheat | nucleus, plastid | 18.21 | 17.17 |
| AT5G24110.1 | Thale cress | nucleus | 15.03 | 17.16 |
| Zm00001d022437_P001 | Maize | mitochondrion, nucleus | 16.47 | 16.86 |
| Os01t0821600-01 | Rice | nucleus | 13.58 | 16.79 |
| EER94905 | Sorghum | nucleus | 15.9 | 16.77 |
| GSMUA_Achr5P07490_001 | Banana | endoplasmic reticulum | 16.18 | 16.72 |
| KRH21927 | Soybean | nucleus | 14.45 | 16.67 |
| Zm00001d047523_P001 | Maize | nucleus | 15.61 | 16.62 |
| TraesCS1D01G300300.1 | Wheat | nucleus | 14.74 | 16.61 |
| Zm00001d010617_P001 | Maize | nucleus | 15.03 | 16.4 |
| EER99917 | Sorghum | mitochondrion, nucleus | 16.76 | 16.38 |
| VIT_08s0058g01390.t01 | Wine grape | nucleus | 16.76 | 16.25 |
| TraesCS2A01G043600.1 | Wheat | nucleus | 13.01 | 16.25 |
| TraesCS2A01G043700.1 | Wheat | nucleus | 12.72 | 16.18 |
| TraesCS4A01G135000.1 | Wheat | nucleus | 11.85 | 16.14 |
| TraesCS2A01G104900.1 | Wheat | nucleus | 15.61 | 16.02 |
| TraesCS3A01G343700.1 | Wheat | nucleus | 12.43 | 15.81 |
| TraesCS2D01G104600.1 | Wheat | nucleus | 15.32 | 15.77 |
| Zm00001d023615_P001 | Maize | plastid | 17.34 | 15.75 |
| Zm00001d023616_P001 | Maize | plastid | 17.34 | 15.75 |
| TraesCS2D01G104700.1 | Wheat | nucleus | 15.61 | 15.61 |
| TraesCS3D01G337500.1 | Wheat | nucleus | 12.14 | 15.56 |
| EES01669 | Sorghum | nucleus | 12.43 | 15.52 |
| TraesCS3B01G375700.1 | Wheat | nucleus | 12.14 | 15.44 |
| Zm00001d043060_P001 | Maize | nucleus | 12.72 | 15.38 |
| TraesCS2B01G056300.1 | Wheat | nucleus | 12.43 | 15.3 |
| TraesCS2A01G043800.1 | Wheat | nucleus | 13.01 | 15.2 |
| TraesCS3D01G337600.1 | Wheat | nucleus | 11.85 | 15.13 |
| HORVU3Hr1G080980.1 | Barley | nucleus | 10.69 | 15.1 |
| Os05t0478400-00 | Rice | nucleus | 15.61 | 15.08 |
| TraesCS3A01G343900.1 | Wheat | nucleus | 11.85 | 15.02 |
| TraesCS2D01G042700.1 | Wheat | nucleus | 12.72 | 15.02 |
| HORVU2Hr1G006600.1 | Barley | nucleus | 13.87 | 14.95 |
| TraesCS2B01G056400.1 | Wheat | nucleus, plastid | 12.43 | 14.93 |
| Os03t0335200-01 | Rice | nucleus | 13.58 | 14.92 |
| TraesCS3B01G375800.1 | Wheat | nucleus | 11.56 | 14.87 |
| HORVU2Hr1G017740.3 | Barley | nucleus | 14.74 | 14.66 |
| TraesCS2B01G121900.1 | Wheat | nucleus | 15.61 | 14.21 |
| TraesCS2D01G104500.1 | Wheat | nucleus | 13.87 | 13.68 |
| Zm00001d012505_P001 | Maize | nucleus | 10.4 | 13.64 |
| HORVU2Hr1G017720.1 | Barley | nucleus, plastid | 14.45 | 13.59 |
| TraesCS2A01G104800.1 | Wheat | nucleus | 13.58 | 13.43 |
| TraesCS2B01G121800.1 | Wheat | nucleus | 13.29 | 13.26 |
| HORVU3Hr1G081030.3 | Barley | nucleus | 11.85 | 12.81 |
| HORVU7Hr1G075960.1 | Barley | nucleus, plastid | 10.69 | 12.63 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | EntrezGene:818670 | UniProt:A0A178VT46 | ProteinID:AEC09872.1 | EMBL:AF426253 |
| ArrayExpress:AT2G40750 | EnsemblPlantsGene:AT2G40750 | RefSeq:AT2G40750 | TAIR:AT2G40750 | RefSeq:AT2G40750-TAIR-G | EnsemblPlants:AT2G40750.1 |
| TAIR:AT2G40750.1 | Unigene:At.26596 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006950 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009751 | GO:GO:0009987 | GO:GO:0031347 |
| GO:GO:0043565 | GO:GO:1900056 | InterPro:IPR003657 | InterPro:IPR036576 | RefSeq:NP_181607.1 | ProteinID:OAP08964.1 |
| PFAM:PF03106 | PO:PO:0000013 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PFscan:PS50811 | PANTHER:PTHR32096 | PANTHER:PTHR32096:SF20 |
| UniProt:Q93WU8 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI00001623FD | Symbol:WRKY54 | InterPro:WRKY_dom |
| InterPro:WRKY_dom_sf | SEG:seg | : | : | : | : |
Description
WRKY54Probable WRKY transcription factor 54 [Source:UniProtKB/Swiss-Prot;Acc:Q93WU8]
Coordinates
chr2:-:17000419..17002528
Molecular Weight (calculated)
38647.3 Da
IEP (calculated)
5.120
GRAVY (calculated)
-0.816
Length
346 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSNSNNTKS IKRKVVDQLV EGYEFATQLQ LLLSHQHSNQ YHIDETRLVS GSGSVSGGPD PVDELMSKIL GSFHKTISVL DSFDPVAVSV PIAVEGSWNA
101: SCGDDSATPV SCNGGDSGES KKKRLGVGKG KRGCYTRKTR SHTRIVEAKS SEDRYAWRKY GQKEILNTTF PRSYFRCTHK PTQGCKATKQ VQKQDQDSEM
201: FQITYIGYHT CTANDQTHAK TEPFDQEIIM DSEKTLAAST AQNHVNAMVQ EQENNTSSVT AIDAGMVKEE QNNNGDQSKD YYEGSSTGED LSLVWQETMM
301: FDDHQNHYYC GETSTTSHQF GFIDNDDQFS SFFDSYCADY ERTSAM
101: SCGDDSATPV SCNGGDSGES KKKRLGVGKG KRGCYTRKTR SHTRIVEAKS SEDRYAWRKY GQKEILNTTF PRSYFRCTHK PTQGCKATKQ VQKQDQDSEM
201: FQITYIGYHT CTANDQTHAK TEPFDQEIIM DSEKTLAAST AQNHVNAMVQ EQENNTSSVT AIDAGMVKEE QNNNGDQSKD YYEGSSTGED LSLVWQETMM
301: FDDHQNHYYC GETSTTSHQF GFIDNDDQFS SFFDSYCADY ERTSAM
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.