Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY23883 | Canola | nucleus | 97.35 | 97.35 |
| CDX79972 | Canola | nucleus | 96.17 | 96.74 |
| Bra000203.1-P | Field mustard | nucleus | 77.29 | 77.06 |
| Bra016974.1-P | Field mustard | nucleus | 72.57 | 74.55 |
| AT2G40750.1 | Thale cress | nucleus | 72.27 | 70.81 |
| Bra003239.1-P | Field mustard | nucleus | 42.18 | 50.53 |
| Bra007243.1-P | Field mustard | nucleus | 41.0 | 50.36 |
| Bra014692.1-P | Field mustard | nucleus | 42.18 | 50.18 |
| PGSC0003DMT400070939 | Potato | nucleus | 17.7 | 26.91 |
| PGSC0003DMT400021625 | Potato | nucleus | 17.11 | 26.61 |
| KRH16921 | Soybean | nucleus | 16.81 | 23.75 |
| KRH09521 | Soybean | nucleus | 17.99 | 23.02 |
| VIT_13s0067g03140.t01 | Wine grape | nucleus | 20.94 | 22.68 |
| KRH53716 | Soybean | nucleus | 21.24 | 22.57 |
| KRH64216 | Soybean | nucleus | 20.94 | 22.4 |
| TraesCS7B01G249700.1 | Wheat | nucleus | 17.99 | 22.26 |
| KRH40720 | Soybean | nucleus | 19.17 | 21.67 |
| TraesCS2A01G489500.1 | Wheat | nucleus | 18.29 | 21.09 |
| Os05t0478800-00 | Rice | nucleus | 13.86 | 21.08 |
| KRH00435 | Soybean | nucleus | 18.58 | 21.07 |
| KRH16918 | Soybean | nucleus | 20.35 | 20.97 |
| PGSC0003DMT400053122 | Potato | nucleus | 17.11 | 20.94 |
| Solyc03g095770.2.1 | Tomato | nucleus | 16.81 | 20.88 |
| TraesCS1D01G300700.1 | Wheat | nucleus | 18.58 | 20.79 |
| Bra004540.1-P | Field mustard | nucleus | 17.4 | 20.7 |
| Bra014426.1-P | Field mustard | nucleus | 16.81 | 20.58 |
| TraesCS2D01G489700.1 | Wheat | nucleus | 17.7 | 20.48 |
| KRH16920 | Soybean | nucleus | 18.29 | 20.46 |
| KRH21928 | Soybean | nucleus | 16.22 | 20.37 |
| HORVU0Hr1G030830.1 | Barley | nucleus, plastid | 16.81 | 20.36 |
| Bra019265.1-P | Field mustard | nucleus | 18.88 | 19.81 |
| TraesCS1A01G301100.1 | Wheat | plastid | 17.7 | 19.8 |
| TraesCS7D01G345700.1 | Wheat | nucleus | 17.4 | 19.8 |
| Bra014693.1-P | Field mustard | nucleus | 15.34 | 19.7 |
| KRH21926 | Soybean | nucleus | 17.11 | 19.59 |
| Solyc09g015770.2.1 | Tomato | extracellular, nucleus | 16.81 | 19.59 |
| Bra000423.1-P | Field mustard | nucleus | 16.22 | 19.57 |
| TraesCS2B01G517400.1 | Wheat | nucleus | 17.11 | 19.53 |
| HORVU7Hr1G083270.2 | Barley | nucleus | 17.7 | 19.48 |
| PGSC0003DMT400075091 | Potato | nucleus | 16.81 | 19.45 |
| Bra016975.1-P | Field mustard | nucleus | 16.22 | 19.37 |
| KRH64882 | Soybean | nucleus | 13.27 | 19.15 |
| KRH21925 | Soybean | nucleus | 16.52 | 19.05 |
| Bra013732.1-P | Field mustard | nucleus | 17.7 | 18.99 |
| Bra026467.1-P | Field mustard | nucleus | 17.4 | 18.91 |
| HORVU2Hr1G109330.1 | Barley | mitochondrion, nucleus, vacuole | 17.99 | 18.77 |
| Os05t0322900-01 | Rice | nucleus | 17.99 | 18.71 |
| Os01t0821600-01 | Rice | nucleus | 15.34 | 18.57 |
| Bra000202.1-P | Field mustard | nucleus | 16.22 | 18.33 |
| Bra033158.1-P | Field mustard | nucleus | 17.7 | 18.13 |
| HORVU1Hr1G069620.7 | Barley | nucleus | 15.93 | 18.0 |
| TraesCS4B01G170100.1 | Wheat | nucleus | 15.93 | 17.88 |
| TraesCS1A01G300900.1 | Wheat | nucleus | 16.22 | 17.8 |
| TraesCS4D01G172200.1 | Wheat | nucleus | 15.63 | 17.73 |
| KRH21927 | Soybean | nucleus | 15.63 | 17.67 |
| VIT_08s0058g01390.t01 | Wine grape | nucleus | 18.58 | 17.65 |
| GSMUA_Achr5P07490_001 | Banana | endoplasmic reticulum | 17.4 | 17.61 |
| TraesCS1D01G300500.1 | Wheat | plastid | 15.93 | 17.59 |
| HORVU4Hr1G050320.2 | Barley | nucleus | 15.34 | 17.45 |
| TraesCS3D01G337500.1 | Wheat | nucleus | 13.86 | 17.41 |
| EES15768 | Sorghum | nucleus | 17.11 | 17.37 |
| TraesCS3A01G343700.1 | Wheat | nucleus | 13.86 | 17.28 |
| Bra009734.1-P | Field mustard | nucleus | 15.93 | 17.25 |
| HORVU3Hr1G080980.1 | Barley | nucleus | 12.39 | 17.14 |
| TraesCS2A01G043600.1 | Wheat | nucleus | 13.86 | 16.97 |
| TraesCS1D01G300300.1 | Wheat | nucleus | 15.34 | 16.94 |
| TraesCS2A01G043700.1 | Wheat | nucleus | 13.57 | 16.91 |
| TraesCS3B01G375700.1 | Wheat | nucleus | 13.57 | 16.91 |
| TraesCS7A01G338500.1 | Wheat | nucleus, plastid | 18.29 | 16.89 |
| Os05t0478400-00 | Rice | nucleus | 17.7 | 16.76 |
| EES01669 | Sorghum | nucleus | 13.57 | 16.61 |
| TraesCS3D01G337600.1 | Wheat | nucleus | 13.27 | 16.61 |
| Os07t0680400-01 | Rice | nucleus | 16.22 | 16.52 |
| TraesCS3A01G343900.1 | Wheat | nucleus | 13.27 | 16.48 |
| Zm00001d010617_P001 | Maize | nucleus | 15.34 | 16.4 |
| TraesCS2B01G056300.1 | Wheat | nucleus | 13.57 | 16.37 |
| TraesCS3B01G375800.1 | Wheat | nucleus | 12.98 | 16.36 |
| Zm00001d043060_P001 | Maize | nucleus | 13.57 | 16.08 |
| TraesCS2A01G104900.1 | Wheat | nucleus | 15.93 | 16.02 |
| Zm00001d023615_P001 | Maize | plastid | 17.99 | 16.01 |
| Zm00001d023616_P001 | Maize | plastid | 17.99 | 16.01 |
| Zm00001d047523_P001 | Maize | nucleus | 15.34 | 16.0 |
| TraesCS2B01G056400.1 | Wheat | nucleus, plastid | 13.57 | 15.97 |
| TraesCS2A01G043800.1 | Wheat | nucleus | 13.86 | 15.88 |
| EER94905 | Sorghum | nucleus | 15.34 | 15.85 |
| HORVU2Hr1G006600.1 | Barley | nucleus | 14.75 | 15.58 |
| TraesCS2D01G104600.1 | Wheat | nucleus | 15.34 | 15.48 |
| Zm00001d022437_P001 | Maize | mitochondrion, nucleus | 15.34 | 15.38 |
| TraesCS2D01G042700.1 | Wheat | nucleus | 13.27 | 15.36 |
| TraesCS4A01G135000.1 | Wheat | nucleus | 11.5 | 15.35 |
| TraesCS2D01G104700.1 | Wheat | nucleus | 15.34 | 15.03 |
| EER99917 | Sorghum | mitochondrion, nucleus | 15.63 | 14.97 |
| Os03t0335200-01 | Rice | nucleus | 13.57 | 14.6 |
| HORVU3Hr1G081030.3 | Barley | nucleus | 13.57 | 14.38 |
| Zm00001d012505_P001 | Maize | nucleus | 10.91 | 14.02 |
| TraesCS2A01G104800.1 | Wheat | nucleus | 14.45 | 14.0 |
| TraesCS2D01G104500.1 | Wheat | nucleus | 14.45 | 13.96 |
| TraesCS2B01G121900.1 | Wheat | nucleus | 15.63 | 13.95 |
| HORVU2Hr1G017720.1 | Barley | nucleus, plastid | 15.04 | 13.86 |
| TraesCS2B01G121800.1 | Wheat | nucleus | 14.16 | 13.83 |
| HORVU2Hr1G017740.3 | Barley | nucleus | 14.16 | 13.79 |
| HORVU7Hr1G075960.1 | Barley | nucleus, plastid | 11.21 | 12.97 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | EnsemblPlantsGene:Bra004586 | EnsemblPlants:Bra004586.1 | EnsemblPlants:Bra004586.1-P | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 |
| UniProt:M4CK52 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR32096 | PANTHER:PTHR32096:SF20 | SMART:SM00774 |
| SUPFAM:SSF118290 | UniParc:UPI000254758F | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : |
Description
AT2G40750 (E=3e-109) WRKY54, ATWRKY54 | WRKY54; transcription factor
Coordinates
chrA05:-:898887..900534
Molecular Weight (calculated)
37988.9 Da
IEP (calculated)
6.005
GRAVY (calculated)
-0.756
Length
339 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPNSNNTKS IKRKVVDQLV QGYEFATQLQ LLLSHQHSSQ YISQTRIVSG DLDPVDELIA KILSSFHKTI SVLDSCDSVP MAVKGSPNAS RGDDLAAPVS
101: CNGGDSGDSR KRLGVGKGKR GCYTRKKRWH TWTVEASRID EDKYAWRKYG QKEILNSKFP RSYFRCTHKP TRGCKATKLV QKQEQDPSLF QITYIGHHTC
201: NVSDQTQANT EPNDHGVVTD SDNALVATVA QDHVNANIQE QEQENDISSL IVVGAGMVKE EDNNNGDQNK NYCEGSSVDG DLSLAWQDVM MMFDDHQHHQ
301: NHYYQGETST ASHQFSFIDN DQLFSLFDPY CPYEGTNAI
101: CNGGDSGDSR KRLGVGKGKR GCYTRKKRWH TWTVEASRID EDKYAWRKYG QKEILNSKFP RSYFRCTHKP TRGCKATKLV QKQEQDPSLF QITYIGHHTC
201: NVSDQTQANT EPNDHGVVTD SDNALVATVA QDHVNANIQE QEQENDISSL IVVGAGMVKE EDNNNGDQNK NYCEGSSVDG DLSLAWQDVM MMFDDHQHHQ
301: NHYYQGETST ASHQFSFIDN DQLFSLFDPY CPYEGTNAI
001: MDSNSNNTKS IKRKVVDQLV EGYEFATQLQ LLLSHQHSNQ YHIDETRLVS GSGSVSGGPD PVDELMSKIL GSFHKTISVL DSFDPVAVSV PIAVEGSWNA
101: SCGDDSATPV SCNGGDSGES KKKRLGVGKG KRGCYTRKTR SHTRIVEAKS SEDRYAWRKY GQKEILNTTF PRSYFRCTHK PTQGCKATKQ VQKQDQDSEM
201: FQITYIGYHT CTANDQTHAK TEPFDQEIIM DSEKTLAAST AQNHVNAMVQ EQENNTSSVT AIDAGMVKEE QNNNGDQSKD YYEGSSTGED LSLVWQETMM
301: FDDHQNHYYC GETSTTSHQF GFIDNDDQFS SFFDSYCADY ERTSAM
101: SCGDDSATPV SCNGGDSGES KKKRLGVGKG KRGCYTRKTR SHTRIVEAKS SEDRYAWRKY GQKEILNTTF PRSYFRCTHK PTQGCKATKQ VQKQDQDSEM
201: FQITYIGYHT CTANDQTHAK TEPFDQEIIM DSEKTLAAST AQNHVNAMVQ EQENNTSSVT AIDAGMVKEE QNNNGDQSKD YYEGSSTGED LSLVWQETMM
301: FDDHQNHYYC GETSTTSHQF GFIDNDDQFS SFFDSYCADY ERTSAM
Arabidopsis Description
WRKY54Probable WRKY transcription factor 54 [Source:UniProtKB/Swiss-Prot;Acc:Q93WU8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.