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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 2
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3D01G337600.1 Wheat nucleus 81.63 73.8
TraesCS3D01G337500.1 Wheat nucleus 80.82 73.33
TraesCS3A01G343900.1 Wheat nucleus 81.22 72.89
TraesCS3A01G343700.1 Wheat nucleus 80.82 72.79
TraesCS3B01G375700.1 Wheat nucleus 80.41 72.43
TraesCS3B01G375800.1 Wheat nucleus 79.18 72.12
HORVU3Hr1G081030.3 Barley nucleus 74.69 57.19
Os01t0821600-01 Rice nucleus 52.65 46.07
EES01669 Sorghum nucleus 48.57 42.96
Zm00001d043060_P001 Maize nucleus 48.98 41.96
Zm00001d012505_P001 Maize nucleus 44.49 41.29
HORVU4Hr1G051970.1 Barley nucleus 12.65 24.8
HORVU1Hr1G069620.7 Barley nucleus 30.2 24.67
HORVU2Hr1G006600.1 Barley nucleus 30.61 23.36
PGSC0003DMT400070939 Potato nucleus 20.0 21.97
HORVU1Hr1G090170.1 Barley nucleus 20.82 20.65
HORVU2Hr1G029430.2 Barley mitochondrion, nucleus 20.41 20.49
HORVU1Hr1G090190.2 Barley nucleus 21.22 20.47
HORVU1Hr1G090110.1 Barley nucleus 20.82 20.16
PGSC0003DMT400021625 Potato nucleus 17.14 19.27
HORVU6Hr1G013890.3 Barley nucleus 17.14 19.0
HORVU4Hr1G052010.2 Barley nucleus 15.92 18.93
HORVU3Hr1G059210.1 Barley nucleus 18.37 18.44
KRH09521 Soybean nucleus 19.59 18.11
HORVU1Hr1G090130.4 Barley nucleus 19.18 18.08
HORVU3Hr1G080860.1 Barley nucleus 18.78 17.97
KRH64216 Soybean nucleus 22.86 17.67
HORVU3Hr1G059220.1 Barley nucleus 22.04 17.53
HORVU5Hr1G034830.3 Barley nucleus 23.67 17.47
KRH53716 Soybean nucleus 22.45 17.24
HORVU4Hr1G050320.2 Barley nucleus 20.82 17.11
KRH40720 Soybean nucleus 20.82 17.0
HORVU3Hr1G058670.1 Barley nucleus 17.14 16.87
HORVU7Hr1G075960.1 Barley nucleus, plastid 20.0 16.72
KRH00435 Soybean nucleus 20.41 16.72
KRH21925 Soybean nucleus 20.0 16.67
HORVU0Hr1G012740.1 Barley nucleus 21.63 16.41
HORVU3Hr1G080890.1 Barley nucleus, plastid, vacuole 19.18 15.99
VIT_13s0067g03140.t01 Wine grape nucleus 20.41 15.97
KRH21928 Soybean nucleus 17.55 15.93
PGSC0003DMT400053122 Potato nucleus 17.96 15.88
KRH21926 Soybean nucleus 19.18 15.88
KRH16921 Soybean nucleus 15.51 15.83
Solyc03g095770.2.1 Tomato nucleus 17.55 15.75
HORVU7Hr1G083270.2 Barley nucleus 19.59 15.58
GSMUA_Achr5P07490_001 Banana endoplasmic reticulum 21.22 15.52
HORVU2Hr1G017740.3 Barley nucleus 22.04 15.52
HORVU5Hr1G056130.2 Barley nucleus 24.49 15.31
KRH16918 Soybean nucleus 20.41 15.2
KRH16920 Soybean nucleus 18.78 15.18
HORVU0Hr1G012750.1 Barley nucleus 20.0 14.76
PGSC0003DMT400075091 Potato nucleus 17.14 14.33
Bra003239.1-P Field mustard nucleus 16.33 14.13
CDX67645 Canola nucleus 16.33 14.13
Bra007243.1-P Field mustard nucleus 15.92 14.13
CDY27218 Canola nucleus 15.92 14.13
CDY32013 Canola nucleus 15.92 13.78
CDX72140 Canola nucleus 15.51 13.77
Solyc09g015770.2.1 Tomato extracellular, nucleus 16.33 13.75
KRH21927 Soybean nucleus 16.73 13.67
AT3G56400.1 Thale cress nucleus 16.33 13.61
HORVU0Hr1G030830.1 Barley nucleus, plastid 15.51 13.57
HORVU1Hr1G069610.1 Barley nucleus 15.92 13.49
HORVU2Hr1G017720.1 Barley nucleus, plastid 20.0 13.32
CDY06967 Canola nucleus 17.55 13.03
CDX75992 Canola nucleus 15.1 12.98
Bra014692.1-P Field mustard nucleus 15.1 12.98
HORVU2Hr1G109330.1 Barley mitochondrion, nucleus, vacuole 17.14 12.92
CDY66845 Canola nucleus 15.1 12.89
Bra016974.1-P Field mustard nucleus 17.14 12.73
HORVU1Hr1G069640.2 Barley nucleus 15.1 12.63
HORVU0Hr1G023420.1 Barley nucleus, plastid 15.92 12.5
CDX79972 Canola nucleus 17.14 12.46
CDY14738 Canola nucleus 16.73 12.42
CDY23883 Canola nucleus 17.14 12.39
Bra004586.1-P Field mustard nucleus 17.14 12.39
VIT_08s0058g01390.t01 Wine grape nucleus 17.96 12.32
CDY35441 Canola nucleus 16.73 12.06
Bra000203.1-P Field mustard nucleus 16.73 12.06
HORVU4Hr1G022970.2 Barley nucleus, plastid 13.47 11.83
CDY22474 Canola nucleus 16.33 11.76
HORVU3Hr1G081000.3 Barley plastid 9.39 11.62
KRH64882 Soybean nucleus 11.02 11.49
HORVU3Hr1G080960.1 Barley nucleus 15.92 10.83
AT2G40750.1 Thale cress nucleus 15.1 10.69
Protein Annotations
MapMan:15.5.22Gene3D:2.20.25.80UniProt:A0A287LWI6GO:GO:0003674GO:GO:0003676GO:GO:0003677
GO:GO:0003700GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634
GO:GO:0006139GO:GO:0006351GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987GO:GO:0043565EnsemblPlantsGene:HORVU3Hr1G080980EnsemblPlants:HORVU3Hr1G080980.1InterPro:IPR003657InterPro:IPR036576
PFAM:PF03106PFscan:PS50811PANTHER:PTHR31282PANTHER:PTHR31282:SF10SMART:SM00774SUPFAM:SSF118290
UniParc:UPI000B46C8C5InterPro:WRKY_domInterPro:WRKY_dom_sfSEG:seg::
Description
No Description!
Coordinates
chrchr3H:+:592402294..592403506
Molecular Weight (calculated)
26214.4 Da
IEP (calculated)
6.863
GRAVY (calculated)
-0.473
Length
245 amino acids
Sequence
(BLAST)
001: AASPPVQAEH QALAAEIIRC CDRVIAAVTA VAADKKRKAM DPGATSRRPG PAAAMPSKRR VRGAEAHREV HAGTTADGFA WRKYGQKDIN GSNHPRLYYR
101: CSSSGEGCAA TRRVQRSQED PAAFIIAYYG EHTCGAGLGD ACQQQRAAPA PPTVVDTGSI ARGIVGADDW NRNSPLLLPL SAEHSAHAAP GDTSRRWLSP
201: SSSSSYSSEV EVELGASPVE EFLDGNFDWE WETVVNSLRF GDLLQ
Best Arabidopsis Sequence Match ( AT2G46400.1 )
(BLAST)
001: MMMEEKLVIN ELELGKELAN RLMNNLKHTS SVDSNKTLIS DILRIYQNAI FMLSFNQDKN ILKRSLEIDG KDSKNVFKKR KVSEKNTEKV KVFVATEQEN
101: GSIDDGHCWR KYGQKEIHGS KNPRAYYRCT HRFTQDCLAV KQVQKSDTDP SLFEVKYLGN HTCNNITSPK TTTNFSVSLT NTNIFEGNRV HVTEQSEDMK
201: PTKSEEVMIS LEDLENKKNI FRTFSFSNHE IENGVWKSNL FLGNFVEDLS PATSGSAITS EVLSAPAAVE NSETADSYFS SLDNIIDFGQ DWLWS
Arabidopsis Description
WRKY46Probable WRKY transcription factor 46 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKD9]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.