Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G034830.3 | Barley | nucleus | 69.04 | 67.17 |
| TraesCS5B01G183700.1 | Wheat | nucleus | 63.16 | 60.18 |
| TraesCS5D01G190700.1 | Wheat | nucleus | 63.16 | 59.82 |
| TraesCS5A01G185600.1 | Wheat | nucleus | 62.85 | 59.18 |
| HORVU3Hr1G058670.1 | Barley | nucleus | 34.98 | 45.38 |
| HORVU0Hr1G012750.1 | Barley | nucleus | 45.51 | 44.28 |
| HORVU5Hr1G056130.2 | Barley | nucleus | 50.46 | 41.58 |
| GSMUA_Achr3P15840_001 | Banana | nucleus | 28.79 | 37.35 |
| HORVU2Hr1G029430.2 | Barley | mitochondrion, nucleus | 27.86 | 36.89 |
| HORVU3Hr1G059210.1 | Barley | nucleus | 25.39 | 33.61 |
| GSMUA_Achr3P25080_001 | Banana | nucleus | 30.03 | 29.22 |
| HORVU1Hr1G090170.1 | Barley | nucleus | 22.29 | 29.15 |
| HORVU1Hr1G090110.1 | Barley | nucleus | 22.6 | 28.85 |
| HORVU4Hr1G051970.1 | Barley | nucleus | 11.15 | 28.8 |
| Bra019265.1-P | Field mustard | nucleus | 28.48 | 28.48 |
| CDX94221 | Canola | nucleus | 28.17 | 28.35 |
| HORVU1Hr1G090190.2 | Barley | nucleus | 22.29 | 28.35 |
| CDY10969 | Canola | nucleus | 28.17 | 28.17 |
| HORVU1Hr1G090130.4 | Barley | nucleus | 22.6 | 28.08 |
| CDY03518 | Canola | nucleus | 26.63 | 27.3 |
| Solyc05g050310.1.1 | Tomato | cytosol, nucleus | 4.95 | 27.12 |
| HORVU3Hr1G059220.1 | Barley | nucleus | 25.7 | 26.95 |
| Bra013732.1-P | Field mustard | nucleus | 26.32 | 26.9 |
| CDY47621 | Canola | nucleus | 26.32 | 26.9 |
| AT4G11070.1 | Thale cress | nucleus | 25.7 | 26.52 |
| CDY65042 | Canola | nucleus | 26.93 | 26.36 |
| AT4G23810.1 | Thale cress | nucleus | 26.01 | 25.93 |
| CDY25271 | Canola | nucleus | 26.32 | 25.68 |
| Bra033158.1-P | Field mustard | nucleus | 26.32 | 25.68 |
| Solyc08g082110.2.1 | Tomato | nucleus | 26.93 | 25.66 |
| Solyc10g009550.2.1 | Tomato | nucleus | 22.6 | 25.17 |
| VIT_15s0046g01140.t01 | Wine grape | nucleus | 25.08 | 25.08 |
| PGSC0003DMT400031695 | Potato | nucleus | 26.32 | 25.07 |
| CDX83367 | Canola | nucleus | 21.05 | 24.46 |
| KRH77637 | Soybean | nucleus | 24.15 | 24.22 |
| Bra000423.1-P | Field mustard | nucleus | 21.05 | 24.2 |
| CDX89127 | Canola | nucleus | 20.74 | 24.19 |
| Bra014426.1-P | Field mustard | nucleus | 20.74 | 24.19 |
| PGSC0003DMT400051194 | Potato | nucleus | 21.67 | 24.14 |
| AT2G46400.1 | Thale cress | nucleus | 21.98 | 24.07 |
| KRH64503 | Soybean | nucleus | 26.93 | 23.9 |
| KRH53440 | Soybean | nucleus | 26.63 | 23.63 |
| CDX95699 | Canola | nucleus | 20.74 | 23.51 |
| KRH68901 | Soybean | nucleus | 26.32 | 23.48 |
| Bra026467.1-P | Field mustard | nucleus | 22.6 | 23.4 |
| CDX80414 | Canola | nucleus | 22.6 | 23.32 |
| VIT_16s0050g02510.t01 | Wine grape | nucleus | 26.01 | 23.08 |
| CDX87141 | Canola | nucleus | 22.29 | 23.08 |
| Solyc05g050330.2.1 | Tomato | nucleus | 17.34 | 22.95 |
| KRG97154 | Soybean | nucleus | 25.7 | 22.93 |
| KRH41300 | Soybean | nucleus | 25.39 | 22.84 |
| VIT_02s0025g01280.t01 | Wine grape | nucleus | 24.15 | 22.81 |
| Bra004540.1-P | Field mustard | nucleus | 20.12 | 22.81 |
| PGSC0003DMT400014949 | Potato | nucleus | 25.39 | 22.78 |
| CDY19847 | Canola | nucleus | 21.98 | 22.76 |
| PGSC0003DMT400000599 | Potato | nucleus | 24.15 | 22.54 |
| Solyc03g007380.1.1 | Tomato | nucleus | 24.46 | 22.38 |
| CDX88077 | Canola | nucleus | 21.67 | 22.36 |
| Bra009734.1-P | Field mustard | nucleus | 21.67 | 22.36 |
| Solyc01g095630.2.1 | Tomato | nucleus | 23.22 | 22.32 |
| CDX80015 | Canola | nucleus | 20.43 | 22.3 |
| CDY42043 | Canola | nucleus | 20.12 | 22.18 |
| AT5G24110.1 | Thale cress | nucleus | 20.74 | 22.11 |
| KRH47935 | Soybean | nucleus | 25.08 | 21.95 |
| Solyc08g008280.2.1 | Tomato | nucleus | 24.46 | 21.94 |
| PGSC0003DMT400023502 | Potato | nucleus | 24.15 | 21.91 |
| HORVU3Hr1G080980.1 | Barley | nucleus | 16.41 | 21.63 |
| KRH60029 | Soybean | nucleus | 24.15 | 21.49 |
| KRH06499 | Soybean | nucleus | 24.77 | 21.45 |
| HORVU0Hr1G030830.1 | Barley | nucleus, plastid | 18.58 | 21.43 |
| PGSC0003DMT400046351 | Potato | nucleus | 19.5 | 20.93 |
| HORVU6Hr1G013890.3 | Barley | nucleus | 14.24 | 20.81 |
| PGSC0003DMT400084227 | Potato | nucleus | 18.58 | 20.41 |
| Solyc05g050300.1.1 | Tomato | nucleus | 11.76 | 19.49 |
| HORVU7Hr1G083270.2 | Barley | nucleus | 18.58 | 19.48 |
| Solyc05g050340.2.1 | Tomato | nucleus | 19.5 | 19.27 |
| HORVU3Hr1G080860.1 | Barley | nucleus | 15.17 | 19.14 |
| HORVU3Hr1G081030.3 | Barley | nucleus | 18.58 | 18.75 |
| PGSC0003DMT400084214 | Potato | nucleus | 19.2 | 18.73 |
| HORVU2Hr1G109330.1 | Barley | mitochondrion, nucleus, vacuole | 18.58 | 18.46 |
| HORVU1Hr1G069620.7 | Barley | nucleus | 17.03 | 18.33 |
| HORVU4Hr1G052010.2 | Barley | nucleus | 11.15 | 17.48 |
| CDX80415 | Canola | nucleus | 7.74 | 16.89 |
| HORVU4Hr1G050320.2 | Barley | nucleus | 15.48 | 16.78 |
| HORVU1Hr1G069640.2 | Barley | nucleus | 14.55 | 16.04 |
| HORVU2Hr1G006600.1 | Barley | nucleus | 15.48 | 15.58 |
| HORVU1Hr1G069610.1 | Barley | nucleus | 13.93 | 15.57 |
| HORVU3Hr1G081000.3 | Barley | plastid | 9.29 | 15.15 |
| HORVU3Hr1G080890.1 | Barley | nucleus, plastid, vacuole | 13.62 | 14.97 |
| HORVU0Hr1G023420.1 | Barley | nucleus, plastid | 13.93 | 14.42 |
| HORVU4Hr1G022970.2 | Barley | nucleus, plastid | 12.38 | 14.34 |
| HORVU2Hr1G017740.3 | Barley | nucleus | 14.86 | 13.79 |
| HORVU7Hr1G075960.1 | Barley | nucleus, plastid | 12.38 | 13.65 |
| HORVU3Hr1G080960.1 | Barley | nucleus | 14.86 | 13.33 |
| HORVU2Hr1G017720.1 | Barley | nucleus, plastid | 15.17 | 13.32 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | UniProt:A0A287E0J2 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:HORVU0Hr1G012740 | EnsemblPlants:HORVU0Hr1G012740.1 | InterPro:IPR003657 | InterPro:IPR036576 |
| PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR32096 | PANTHER:PTHR32096:SF33 | SMART:SM00774 | SUPFAM:SSF118290 |
| UniParc:UPI000B47118B | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchrUn:-:73225306..73226843
Molecular Weight (calculated)
24195.7 Da
IEP (calculated)
8.394
GRAVY (calculated)
-0.377
Length
323 amino acids
Sequence
(BLAST)
(BLAST)
001: MESVDENGGS RLVVTELGHI KELVRQLGVN LGGCPEHCKR LAAQIFDVTE RSIGMIMSGH FDCPKRSAAG LDSPPFSATP SPLSDVSGMP FHTNNKKRKI
101: MEKRKHQVRV SSEVGGAETP VDDGHSWRKY GQKDILGAKH PRGYYRCTHR KSQGCAATKQ VQRADEDPTL FDVIYHGEHT CIHKTVAALA AGHAEENPGA
201: SRLLQNLSTS LTVNTEGLTA TAGXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
301: XXXXXXXXXX XXXXXXXXXX XXX
101: MEKRKHQVRV SSEVGGAETP VDDGHSWRKY GQKDILGAKH PRGYYRCTHR KSQGCAATKQ VQRADEDPTL FDVIYHGEHT CIHKTVAALA AGHAEENPGA
201: SRLLQNLSTS LTVNTEGLTA TAGXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
301: XXXXXXXXXX XXXXXXXXXX XXX
001: MEGRDMLSWE QKTLLSELIN GFDAAKKLQA RLREAPSPSS SFSSPATAVA ETNEILVKQI VSSYERSLLL LNWSSSPSVQ LIPTPVTVVP VANPGSVPES
101: PASINGSPRS EEFADGGGSS ESHHRQDYIF NSKKRKMLPK WSEKVRISPE RGLEGPQDDV FSWRKYGQKD ILGAKFPRSY YRCTHRSTQN CWATKQVQRS
201: DGDATVFEVT YRGTHTCSQA ITRTPPLASP EKRQDTRVKP AITQKPKDIL ESLKSNLTVR TDGLDDGKDV FSFPDTPPFY NYGTINGEFG HVESSPIFDV
301: VDWFNPTVEI DTTFPAFLHE SIYY
101: PASINGSPRS EEFADGGGSS ESHHRQDYIF NSKKRKMLPK WSEKVRISPE RGLEGPQDDV FSWRKYGQKD ILGAKFPRSY YRCTHRSTQN CWATKQVQRS
201: DGDATVFEVT YRGTHTCSQA ITRTPPLASP EKRQDTRVKP AITQKPKDIL ESLKSNLTVR TDGLDDGKDV FSFPDTPPFY NYGTINGEFG HVESSPIFDV
301: VDWFNPTVEI DTTFPAFLHE SIYY
Arabidopsis Description
WRKY53Probable WRKY transcription factor 53 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUP6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.