Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY19847 | Canola | nucleus | 97.12 | 97.12 |
| CDX80414 | Canola | nucleus | 78.85 | 78.59 |
| CDX88077 | Canola | nucleus | 77.56 | 77.32 |
| AT5G24110.1 | Thale cress | nucleus | 73.4 | 75.58 |
| CDX80415 | Canola | nucleus | 32.05 | 67.57 |
| GSMUA_Achr3P15840_001 | Banana | nucleus | 25.32 | 31.73 |
| CDX94221 | Canola | nucleus | 31.73 | 30.84 |
| CDY03518 | Canola | nucleus | 31.09 | 30.79 |
| CDY10969 | Canola | nucleus | 31.73 | 30.65 |
| CDY47621 | Canola | nucleus | 30.45 | 30.06 |
| TraesCS1B01G440700.1 | Wheat | nucleus | 22.44 | 29.05 |
| CDY06968 | Canola | nucleus | 14.42 | 29.03 |
| CDY65042 | Canola | nucleus | 30.45 | 28.79 |
| GSMUA_AchrUn_... | Banana | nucleus | 26.92 | 28.47 |
| GSMUA_Achr1P27980_001 | Banana | nucleus | 28.21 | 28.39 |
| TraesCS1A01G410700.1 | Wheat | nucleus | 22.44 | 28.34 |
| TraesCS1D01G418600.1 | Wheat | nucleus | 22.44 | 28.34 |
| GSMUA_Achr3P25080_001 | Banana | nucleus | 30.13 | 28.31 |
| HORVU3Hr1G059210.1 | Barley | nucleus | 22.12 | 28.28 |
| TraesCS3D01G238300.1 | Wheat | nucleus | 26.28 | 28.18 |
| CDY25271 | Canola | nucleus | 29.81 | 28.1 |
| GSMUA_Achr7P14140_001 | Banana | nucleus | 32.37 | 28.06 |
| TraesCS1D01G418000.1 | Wheat | nucleus | 22.12 | 28.05 |
| TraesCS2B01G187500.1 | Wheat | nucleus | 26.28 | 27.99 |
| TraesCS2D01G168600.1 | Wheat | nucleus | 25.96 | 27.65 |
| CDX89127 | Canola | nucleus | 24.36 | 27.44 |
| Solyc05g050310.1.1 | Tomato | cytosol, nucleus | 5.13 | 27.12 |
| Os05t0571200-01 | Rice | nucleus | 24.04 | 27.08 |
| CDX80015 | Canola | nucleus | 25.64 | 27.03 |
| TraesCS2A01G161500.1 | Wheat | nucleus | 25.64 | 27.03 |
| CDX83367 | Canola | nucleus | 24.04 | 26.98 |
| TraesCS1B01G440300.1 | Wheat | nucleus | 21.15 | 26.94 |
| HORVU1Hr1G090110.1 | Barley | nucleus | 21.79 | 26.88 |
| HORVU1Hr1G090190.2 | Barley | nucleus | 21.79 | 26.77 |
| CDX95699 | Canola | nucleus | 24.36 | 26.67 |
| TraesCS1D01G418400.1 | Wheat | nucleus | 21.79 | 26.67 |
| HORVU3Hr1G059220.1 | Barley | nucleus | 26.28 | 26.62 |
| CDY42043 | Canola | nucleus | 25.0 | 26.62 |
| Os11t0685700-00 | Rice | nucleus | 16.35 | 26.56 |
| HORVU5Hr1G034830.3 | Barley | nucleus | 28.21 | 26.51 |
| TraesCS1A01G410500.1 | Wheat | nucleus | 21.47 | 26.48 |
| TraesCS1B01G440600.1 | Wheat | nucleus | 20.19 | 26.47 |
| TraesCS1D01G418500.1 | Wheat | nucleus | 20.51 | 26.45 |
| GSMUA_Achr6P05710_001 | Banana | nucleus | 28.53 | 26.18 |
| Zm00001d020136_P001 | Maize | nucleus | 25.32 | 26.16 |
| EES18716 | Sorghum | nucleus | 22.76 | 26.1 |
| TraesCS1B01G440500.1 | Wheat | nucleus | 21.79 | 26.05 |
| HORVU1Hr1G090170.1 | Barley | nucleus | 20.51 | 25.91 |
| HORVU2Hr1G029430.2 | Barley | mitochondrion, nucleus | 20.19 | 25.82 |
| TraesCS5B01G183700.1 | Wheat | nucleus | 27.88 | 25.66 |
| Zm00001d050247_P001 | Maize | nucleus | 26.28 | 25.62 |
| TraesCS5D01G190700.1 | Wheat | nucleus | 27.88 | 25.51 |
| EER96589 | Sorghum | nucleus | 25.32 | 25.48 |
| HORVU1Hr1G090130.4 | Barley | nucleus | 21.15 | 25.38 |
| EER96590 | Sorghum | nucleus | 26.6 | 25.3 |
| Os01t0656400-00 | Rice | nucleus | 22.12 | 25.18 |
| TraesCS5A01G185600.1 | Wheat | nucleus | 27.56 | 25.07 |
| Zm00001d020137_P001 | Maize | nucleus | 25.96 | 25.0 |
| TraesCS5D01G190800.1 | Wheat | nucleus | 27.88 | 24.79 |
| Os08t0386200-01 | Rice | nucleus | 25.32 | 24.76 |
| EES03370 | Sorghum | nucleus | 27.24 | 24.57 |
| Zm00001d005622_P001 | Maize | nucleus | 25.96 | 24.47 |
| Zm00001d011496_P002 | Maize | nucleus | 25.64 | 24.46 |
| OQU80381 | Sorghum | nucleus | 26.6 | 24.41 |
| Zm00001d032265_P001 | Maize | nucleus | 25.96 | 24.32 |
| TraesCS5B01G183800.1 | Wheat | nucleus | 26.92 | 24.28 |
| HORVU3Hr1G058670.1 | Barley | nucleus | 19.23 | 24.1 |
| TraesCS1A01G410600.1 | Wheat | nucleus | 17.95 | 24.03 |
| CDY13358 | Canola | nucleus | 11.86 | 23.72 |
| GSMUA_Achr10P... | Banana | extracellular, nucleus | 23.4 | 23.55 |
| GSMUA_Achr4P15640_001 | Banana | nucleus | 26.28 | 23.5 |
| TraesCS5A01G185700.1 | Wheat | nucleus | 26.28 | 23.5 |
| TraesCS7D01G110600.1 | Wheat | nucleus | 27.56 | 23.37 |
| Solyc05g050330.2.1 | Tomato | nucleus | 18.27 | 23.36 |
| TraesCS7A01G116000.1 | Wheat | nucleus | 27.88 | 23.08 |
| Os09t0334500-01 | Rice | nucleus | 26.28 | 22.71 |
| TraesCS7B01G012600.1 | Wheat | nucleus | 26.92 | 22.64 |
| Os06t0158100-00 | Rice | nucleus | 28.21 | 22.51 |
| HORVU0Hr1G012740.1 | Barley | nucleus | 23.08 | 22.29 |
| EER87882 | Sorghum | nucleus | 26.92 | 22.22 |
| HORVU5Hr1G056130.2 | Barley | nucleus | 27.88 | 22.19 |
| CDY27218 | Canola | nucleus | 19.55 | 22.1 |
| Zm00001d044010_P001 | Maize | nucleus | 23.72 | 22.09 |
| CDX72140 | Canola | nucleus | 19.23 | 21.74 |
| PGSC0003DMT400046351 | Potato | nucleus | 20.83 | 21.59 |
| Zm00001d036244_P001 | Maize | nucleus | 25.32 | 21.58 |
| CDY32013 | Canola | nucleus | 19.55 | 21.55 |
| Zm00001d009619_P002 | Maize | nucleus | 20.51 | 21.55 |
| Zm00001d045283_P001 | Maize | nucleus | 27.24 | 21.46 |
| CDX75991 | Canola | nucleus | 17.95 | 21.21 |
| CDY59625 | Canola | nucleus | 17.95 | 21.21 |
| CDX67645 | Canola | nucleus | 19.23 | 21.2 |
| CDY71829 | Canola | nucleus | 16.67 | 20.63 |
| CDY35442 | Canola | nucleus | 19.87 | 20.6 |
| HORVU0Hr1G012750.1 | Barley | nucleus | 21.79 | 20.48 |
| CDX75992 | Canola | nucleus | 18.59 | 20.35 |
| CDY22473 | Canola | nucleus | 19.55 | 20.33 |
| PGSC0003DMT400084214 | Potato | nucleus | 21.47 | 20.24 |
| Solyc05g050340.2.1 | Tomato | nucleus | 20.83 | 19.88 |
| PGSC0003DMT400084227 | Potato | nucleus | 18.59 | 19.73 |
| CDY66845 | Canola | nucleus | 17.95 | 19.51 |
| Solyc05g050300.1.1 | Tomato | nucleus | 12.18 | 19.49 |
| CDY22474 | Canola | nucleus | 20.19 | 18.53 |
| CDY35441 | Canola | nucleus | 19.87 | 18.24 |
| CDY14738 | Canola | nucleus | 19.23 | 18.18 |
| CDY06967 | Canola | nucleus | 18.91 | 17.88 |
| CDY23883 | Canola | nucleus | 19.23 | 17.7 |
| CDX79972 | Canola | nucleus | 18.59 | 17.21 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078DCY6 | EnsemblPlants:CDX87141 | ProteinID:CDX87141 | ProteinID:CDX87141.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00146054001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR32096 |
| PANTHER:PTHR32096:SF34 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EEB533 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaC09g04560D
Coordinates
chrLK031849:+:727650..729162
Molecular Weight (calculated)
35022.6 Da
IEP (calculated)
7.030
GRAVY (calculated)
-0.851
Length
312 amino acids
Sequence
(BLAST)
(BLAST)
001: MERNSNGREW EKMKKELNEL MTEGRDYAHQ LKSQLGSTSS QESREHLAKK ILESYHKSLT IMNYSGELDQ VSPHSHGTGS PKSDDSDHQE PHIIQSSKKS
101: MLRWTRKVRI APGVVIDRAL DDGFSWRKYG QKDILGAKFP RGYHRCTYRK AQGCEATKQV QRSNEDPMLF EIIYRGIHSC SQASNVGSII PVQVLEPNQT
201: QEQENLEIAK ASLDTGHHNY NHQAHLHQTL NYPLPSTLNL ESNNVMLQEK DHNIGFLGST SYSDANYNFL ASHDAGSASH STSNSPSTVG LESPFENFGP
301: SHPFGGFGGF YS
101: MLRWTRKVRI APGVVIDRAL DDGFSWRKYG QKDILGAKFP RGYHRCTYRK AQGCEATKQV QRSNEDPMLF EIIYRGIHSC SQASNVGSII PVQVLEPNQT
201: QEQENLEIAK ASLDTGHHNY NHQAHLHQTL NYPLPSTLNL ESNNVMLQEK DHNIGFLGST SYSDANYNFL ASHDAGSASH STSNSPSTVG LESPFENFGP
301: SHPFGGFGGF YS
001: MEKNHSSGEW EKMKNEINEL MIEGRDYAHQ FGSASSQETR EHLAKKILQS YHKSLTIMNY SGELDQVSQG GGSPKSDDSD QEPLVIKSSK KSMPRWSSKV
101: RIAPGAGVDR TLDDGFSWRK YGQKDILGAK FPRGYYRCTY RKSQGCEATK QVQRSDENQM LLEISYRGIH SCSQAANVGT TMPIQNLEPN QTQEHGNLDM
201: VKESVDNYNH QAHLHHNLHY PLSSTPNLEN NNAYMLQMRD QNIEYFGSTS FSSDLGTSIN YNFPASGSAS HSASNSPSTV PLESPFESYD PNHPYGGFGG
301: FYS
101: RIAPGAGVDR TLDDGFSWRK YGQKDILGAK FPRGYYRCTY RKSQGCEATK QVQRSDENQM LLEISYRGIH SCSQAANVGT TMPIQNLEPN QTQEHGNLDM
201: VKESVDNYNH QAHLHHNLHY PLSSTPNLEN NNAYMLQMRD QNIEYFGSTS FSSDLGTSIN YNFPASGSAS HSASNSPSTV PLESPFESYD PNHPYGGFGG
301: FYS
Arabidopsis Description
WRKY30Probable WRKY transcription factor 30 [Source:UniProtKB/Swiss-Prot;Acc:Q9FL62]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.