Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000202.1-P | Field mustard | nucleus | 97.67 | 98.0 |
| CDY22473 | Canola | nucleus | 95.35 | 95.67 |
| CDY71829 | Canola | nucleus | 65.78 | 78.57 |
| CDY06968 | Canola | nucleus | 40.2 | 78.06 |
| AT2G40740.3 | Thale cress | nucleus | 71.1 | 71.1 |
| CDX75991 | Canola | nucleus | 42.52 | 48.48 |
| CDY59625 | Canola | nucleus | 41.86 | 47.73 |
| CDY13358 | Canola | nucleus | 21.93 | 42.31 |
| KRH64215 | Soybean | nucleus | 38.87 | 34.72 |
| KRH53718 | Soybean | nucleus | 37.54 | 34.14 |
| VIT_13s0067g03130.t01 | Wine grape | nucleus | 40.53 | 33.52 |
| HORVU6Hr1G013890.3 | Barley | nucleus | 24.58 | 33.48 |
| Solyc06g048870.1.1 | Tomato | nucleus, vacuole | 26.58 | 32.92 |
| GSMUA_Achr9P04830_001 | Banana | nucleus | 17.94 | 29.67 |
| GSMUA_Achr8P01730_001 | Banana | nucleus | 30.23 | 29.64 |
| PGSC0003DMT400022638 | Potato | nucleus | 33.89 | 29.39 |
| GSMUA_Achr6P32460_001 | Banana | nucleus | 27.91 | 25.77 |
| OQU77713 | Sorghum | nucleus | 32.23 | 25.66 |
| TraesCS6D01G074200.1 | Wheat | nucleus | 32.23 | 24.87 |
| TraesCS6A01G080500.1 | Wheat | nucleus | 32.23 | 24.81 |
| TraesCS6B01G108000.1 | Wheat | nucleus | 31.89 | 24.49 |
| TraesCS1B01G243100.1 | Wheat | nucleus | 28.57 | 23.96 |
| CDX83367 | Canola | nucleus | 21.26 | 23.02 |
| Zm00001d037854_P001 | Maize | extracellular | 31.23 | 22.98 |
| Os05t0321900-01 | Rice | nucleus | 32.56 | 22.9 |
| CDY03518 | Canola | nucleus | 23.59 | 22.54 |
| CDY42043 | Canola | nucleus | 21.93 | 22.53 |
| CDX95699 | Canola | nucleus | 21.26 | 22.46 |
| CDX80015 | Canola | nucleus | 21.93 | 22.3 |
| CDY47621 | Canola | nucleus | 23.26 | 22.15 |
| CDX72140 | Canola | nucleus | 20.27 | 22.1 |
| CDX89127 | Canola | nucleus | 20.27 | 22.02 |
| CDY27218 | Canola | nucleus | 19.6 | 21.38 |
| CDY10969 | Canola | nucleus | 22.59 | 21.05 |
| CDX94221 | Canola | nucleus | 22.26 | 20.87 |
| CDX80414 | Canola | nucleus | 20.93 | 20.13 |
| CDX75992 | Canola | nucleus | 18.94 | 20.0 |
| CDY19847 | Canola | nucleus | 20.6 | 19.87 |
| CDX87141 | Canola | nucleus | 20.6 | 19.87 |
| CDY66845 | Canola | nucleus | 18.94 | 19.86 |
| CDY65042 | Canola | nucleus | 21.59 | 19.7 |
| CDX67645 | Canola | nucleus | 18.27 | 19.43 |
| CDY25271 | Canola | nucleus | 21.26 | 19.34 |
| CDX88077 | Canola | nucleus | 19.93 | 19.17 |
| CDY32013 | Canola | nucleus | 17.61 | 18.73 |
| CDY14738 | Canola | nucleus | 18.94 | 17.27 |
| CDY23883 | Canola | nucleus | 19.27 | 17.11 |
| CDY06967 | Canola | nucleus | 18.6 | 16.97 |
| CDX79972 | Canola | nucleus | 18.94 | 16.91 |
| CDY35441 | Canola | nucleus | 17.94 | 15.88 |
| CDY22474 | Canola | nucleus | 17.61 | 15.59 |
| CDX80415 | Canola | nucleus | 7.31 | 14.86 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078HCC5 | UniProt:A0A078HCC5 | EnsemblPlants:CDY35442 | ProteinID:CDY35442 |
| ProteinID:CDY35442.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00058443001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31282 |
| PANTHER:PTHR31282:SF38 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EF1377 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaA03g19180DBnaA03g19180D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HCC5]
Coordinates
chrLK032351:-:382179..384137
Molecular Weight (calculated)
33655.6 Da
IEP (calculated)
6.697
GRAVY (calculated)
-0.667
Length
301 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEVMSIIFH GLKLVDELKS SLQEKSPESL STSLDEITKT FDDAKERLKI VLVIRNSETT MNQVKPVISS CSDRMLMQIE PDDLMHEYWL RYGGSTSSHG
101: TEAVTQRQLM AVDGNGGRNL TATERSGGSG SGSSTPRQLR RKNEGEEQTV LVPALRSGNT DLPPDDSHTW RKYGQKEILH SKFPRAYYRC THQKLYNCPA
201: KKQVQRLNDD PFTFRVTYRG SHTCHIYSTA PTASATAPTA LITTTTTTSH PVDYGPFFDM AEAMMLGSCG IGANMDFIFP CNDPPHHHHC YQRSEDGDGD
301: K
101: TEAVTQRQLM AVDGNGGRNL TATERSGGSG SGSSTPRQLR RKNEGEEQTV LVPALRSGNT DLPPDDSHTW RKYGQKEILH SKFPRAYYRC THQKLYNCPA
201: KKQVQRLNDD PFTFRVTYRG SHTCHIYSTA PTASATAPTA LITTTTTTSH PVDYGPFFDM AEAMMLGSCG IGANMDFIFP CNDPPHHHHC YQRSEDGDGD
301: K
001: MYSYKKISYQ MEEVMSMIFH GMKLVKSLES SLPEKPPESL LTSLDEIVKT FSDANERLKM LLEIKNSETA LNKTKPVIVS VANQMLMQME PGLMQEYWLR
101: YGGSTSSQGT EAMFQTQLMA VDGGGERNLT AAVERSGASG SSTPRQRRRK DEGEEQTVLV AALRTGNTDL PPDDNHTWRK YGQKEILGSR FPRAYYRCTH
201: QKLYNCPAKK QVQRLNDDPF TFRVTYRGSH TCYNSTAPTA SSATPSTIPI SSVTTGHSVD YGLAVVDMAD VMFGSGGVGT NMDFIFPKND PS
101: YGGSTSSQGT EAMFQTQLMA VDGGGERNLT AAVERSGASG SSTPRQRRRK DEGEEQTVLV AALRTGNTDL PPDDNHTWRK YGQKEILGSR FPRAYYRCTH
201: QKLYNCPAKK QVQRLNDDPF TFRVTYRGSH TCYNSTAPTA SSATPSTIPI SSVTTGHSVD YGLAVVDMAD VMFGSGGVGT NMDFIFPKND PS
Arabidopsis Description
WRKY55WRKY DNA-binding protein 55 [Source:TAIR;Acc:AT2G40740]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.