Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra013732.1-P | Field mustard | nucleus | 98.73 | 98.42 |
| CDY47621 | Canola | nucleus | 97.46 | 97.15 |
| CDY10969 | Canola | nucleus | 77.78 | 75.85 |
| CDX94221 | Canola | nucleus | 76.83 | 75.39 |
| AT4G23810.1 | Thale cress | nucleus | 77.14 | 75.0 |
| CDY65042 | Canola | nucleus | 57.46 | 54.85 |
| CDY25271 | Canola | nucleus | 56.19 | 53.47 |
| KRH41300 | Soybean | nucleus | 43.81 | 38.44 |
| KRH60029 | Soybean | nucleus | 43.17 | 37.47 |
| PGSC0003DMT400014949 | Potato | nucleus | 42.22 | 36.94 |
| VIT_02s0025g01280.t01 | Wine grape | nucleus | 40.0 | 36.84 |
| Solyc08g008280.2.1 | Tomato | nucleus | 41.59 | 36.39 |
| PGSC0003DMT400031695 | Potato | nucleus | 39.05 | 36.28 |
| Solyc08g082110.2.1 | Tomato | nucleus | 39.05 | 36.28 |
| KRH77637 | Soybean | nucleus | 36.83 | 36.02 |
| HORVU3Hr1G059210.1 | Barley | nucleus | 26.03 | 33.61 |
| GSMUA_Achr3P25080_001 | Banana | nucleus | 34.92 | 33.13 |
| CDX80414 | Canola | nucleus | 32.38 | 32.59 |
| CDX88077 | Canola | nucleus | 32.38 | 32.59 |
| GSMUA_Achr1P27980_001 | Banana | nucleus | 32.06 | 32.58 |
| TraesCS3D01G238300.1 | Wheat | nucleus | 29.84 | 32.3 |
| GSMUA_Achr3P15840_001 | Banana | nucleus | 25.4 | 32.13 |
| GSMUA_Achr7P14140_001 | Banana | nucleus | 36.51 | 31.94 |
| GSMUA_AchrUn_... | Banana | nucleus | 29.84 | 31.86 |
| CDX87141 | Canola | nucleus | 30.79 | 31.09 |
| GSMUA_Achr6P05710_001 | Banana | nucleus | 33.33 | 30.88 |
| CDY19847 | Canola | nucleus | 30.48 | 30.77 |
| TraesCS2D01G168600.1 | Wheat | nucleus | 28.57 | 30.72 |
| TraesCS1B01G440700.1 | Wheat | nucleus | 23.17 | 30.29 |
| TraesCS1B01G440600.1 | Wheat | nucleus | 22.86 | 30.25 |
| HORVU3Hr1G059220.1 | Barley | nucleus | 29.52 | 30.19 |
| TraesCS1D01G418500.1 | Wheat | nucleus | 23.17 | 30.17 |
| CDY13358 | Canola | nucleus | 14.92 | 30.13 |
| TraesCS2B01G187500.1 | Wheat | nucleus | 27.94 | 30.03 |
| Os11t0685700-00 | Rice | nucleus | 18.1 | 29.69 |
| CDY06968 | Canola | nucleus | 14.6 | 29.68 |
| TraesCS1D01G418000.1 | Wheat | nucleus | 23.17 | 29.67 |
| HORVU1Hr1G090110.1 | Barley | nucleus | 23.81 | 29.64 |
| Os05t0571200-01 | Rice | nucleus | 26.03 | 29.6 |
| HORVU1Hr1G090170.1 | Barley | nucleus | 23.17 | 29.55 |
| TraesCS1D01G418600.1 | Wheat | nucleus | 23.17 | 29.55 |
| TraesCS2A01G161500.1 | Wheat | nucleus | 27.62 | 29.39 |
| CDX89127 | Canola | nucleus | 25.71 | 29.24 |
| CDY42043 | Canola | nucleus | 26.98 | 29.01 |
| Os08t0386200-01 | Rice | nucleus | 29.21 | 28.84 |
| CDX83367 | Canola | nucleus | 25.4 | 28.78 |
| HORVU1Hr1G090190.2 | Barley | nucleus | 23.17 | 28.74 |
| CDX80015 | Canola | nucleus | 26.98 | 28.72 |
| HORVU2Hr1G029430.2 | Barley | mitochondrion, nucleus | 22.22 | 28.69 |
| TraesCS1D01G418400.1 | Wheat | nucleus | 23.17 | 28.63 |
| HORVU5Hr1G034830.3 | Barley | nucleus | 30.16 | 28.61 |
| TraesCS1B01G440300.1 | Wheat | nucleus | 22.22 | 28.57 |
| Os01t0656400-00 | Rice | nucleus | 24.76 | 28.47 |
| TraesCS1A01G410500.1 | Wheat | nucleus | 22.86 | 28.46 |
| TraesCS1A01G410700.1 | Wheat | nucleus | 22.22 | 28.34 |
| EES18716 | Sorghum | nucleus | 24.44 | 28.31 |
| Zm00001d050247_P001 | Maize | nucleus | 28.57 | 28.12 |
| CDX95699 | Canola | nucleus | 25.4 | 28.07 |
| TraesCS5D01G190700.1 | Wheat | nucleus | 30.16 | 27.86 |
| TraesCS5B01G183800.1 | Wheat | nucleus | 30.48 | 27.75 |
| TraesCS5B01G183700.1 | Wheat | nucleus | 29.84 | 27.73 |
| CDX80415 | Canola | nucleus | 13.02 | 27.7 |
| HORVU1Hr1G090130.4 | Barley | nucleus | 22.86 | 27.69 |
| TraesCS1B01G440500.1 | Wheat | nucleus | 22.86 | 27.59 |
| Zm00001d020136_P001 | Maize | nucleus | 26.35 | 27.48 |
| TraesCS5D01G190800.1 | Wheat | nucleus | 30.48 | 27.35 |
| EER87882 | Sorghum | nucleus | 32.38 | 26.98 |
| EES03370 | Sorghum | nucleus | 29.52 | 26.88 |
| Zm00001d020137_P001 | Maize | nucleus | 27.62 | 26.85 |
| TraesCS5A01G185600.1 | Wheat | nucleus | 29.21 | 26.82 |
| OQU80381 | Sorghum | nucleus | 28.89 | 26.76 |
| TraesCS5A01G185700.1 | Wheat | nucleus | 29.52 | 26.65 |
| TraesCS7D01G110600.1 | Wheat | nucleus | 31.11 | 26.63 |
| HORVU0Hr1G012740.1 | Barley | nucleus | 27.3 | 26.63 |
| TraesCS1A01G410600.1 | Wheat | nucleus | 19.68 | 26.61 |
| Zm00001d011496_P002 | Maize | nucleus | 27.62 | 26.61 |
| Zm00001d036244_P001 | Maize | nucleus | 30.79 | 26.5 |
| EER96589 | Sorghum | nucleus | 26.03 | 26.45 |
| Zm00001d032265_P001 | Maize | nucleus | 27.94 | 26.43 |
| TraesCS7B01G012600.1 | Wheat | nucleus | 30.79 | 26.15 |
| HORVU3Hr1G058670.1 | Barley | nucleus | 20.63 | 26.1 |
| Os09t0334500-01 | Rice | nucleus | 29.84 | 26.04 |
| EER96590 | Sorghum | nucleus | 26.98 | 25.91 |
| GSMUA_Achr10P... | Banana | extracellular, nucleus | 25.4 | 25.81 |
| Zm00001d045283_P001 | Maize | nucleus | 32.38 | 25.76 |
| TraesCS7A01G116000.1 | Wheat | nucleus | 30.79 | 25.73 |
| Zm00001d005622_P001 | Maize | nucleus | 26.98 | 25.68 |
| Os06t0158100-00 | Rice | nucleus | 31.43 | 25.32 |
| GSMUA_Achr4P15640_001 | Banana | nucleus | 27.62 | 24.93 |
| Zm00001d044010_P001 | Maize | nucleus | 26.35 | 24.78 |
| HORVU5Hr1G056130.2 | Barley | nucleus | 30.48 | 24.49 |
| CDY35442 | Canola | nucleus | 22.54 | 23.59 |
| CDY71829 | Canola | nucleus | 18.73 | 23.41 |
| CDY22473 | Canola | nucleus | 22.22 | 23.33 |
| CDY59625 | Canola | nucleus | 19.37 | 23.11 |
| Zm00001d009619_P002 | Maize | nucleus | 21.27 | 22.56 |
| CDX75991 | Canola | nucleus | 18.73 | 22.35 |
| HORVU0Hr1G012750.1 | Barley | nucleus | 23.17 | 21.99 |
| CDY27218 | Canola | nucleus | 18.41 | 21.01 |
| CDX72140 | Canola | nucleus | 17.78 | 20.29 |
| CDX75992 | Canola | nucleus | 17.78 | 19.65 |
| CDX67645 | Canola | nucleus | 17.46 | 19.43 |
| CDY32013 | Canola | nucleus | 17.46 | 19.43 |
| CDY66845 | Canola | nucleus | 17.46 | 19.16 |
| CDY22474 | Canola | nucleus | 20.0 | 18.53 |
| CDY35441 | Canola | nucleus | 20.0 | 18.53 |
| CDY23883 | Canola | nucleus | 19.05 | 17.7 |
| CDX79972 | Canola | nucleus | 18.73 | 17.51 |
| CDY14738 | Canola | nucleus | 17.78 | 16.97 |
| CDY06967 | Canola | nucleus | 17.46 | 16.67 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078EVE2 | EnsemblPlants:CDY03518 | ProteinID:CDY03518 | ProteinID:CDY03518.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00116202001 |
| InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR32096 | PANTHER:PTHR32096:SF36 |
| SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EDD4E8 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg |
Description
BnaC01g15640D
Coordinates
chrLK031943:+:1004669..1005949
Molecular Weight (calculated)
35077.0 Da
IEP (calculated)
5.731
GRAVY (calculated)
-0.674
Length
315 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGQKAMLAW EQKTLQSEVS LGLEAAKKLQ ARLSEASSPS SSSSYPAAET NEILMEQILS SYDKVLVMLN WSSSPPVQLT PATVAVVPVV NSGGIPESPA
101: SINGSPRSED GGGSSESHRQ DHMFNSRKRK MLPKWTEKVR ISPERGLEGP QDDVYSWRKY GQKDILGAKF PRSYYRCTHR STQNCWATKQ VQRSDSDPTV
201: FELTYRGTHT CQQGTPPPHP PPASPEKRNT RPKLTTTAQK PNDLLESLKT SLTVRTEGLD DADNVFSFPN TPPFCDFGTI NDEFSSPIFD VVDWLNPTVE
301: IDPAFPTFLQ ESIYY
101: SINGSPRSED GGGSSESHRQ DHMFNSRKRK MLPKWTEKVR ISPERGLEGP QDDVYSWRKY GQKDILGAKF PRSYYRCTHR STQNCWATKQ VQRSDSDPTV
201: FELTYRGTHT CQQGTPPPHP PPASPEKRNT RPKLTTTAQK PNDLLESLKT SLTVRTEGLD DADNVFSFPN TPPFCDFGTI NDEFSSPIFD VVDWLNPTVE
301: IDPAFPTFLQ ESIYY
001: MEGRDMLSWE QKTLLSELIN GFDAAKKLQA RLREAPSPSS SFSSPATAVA ETNEILVKQI VSSYERSLLL LNWSSSPSVQ LIPTPVTVVP VANPGSVPES
101: PASINGSPRS EEFADGGGSS ESHHRQDYIF NSKKRKMLPK WSEKVRISPE RGLEGPQDDV FSWRKYGQKD ILGAKFPRSY YRCTHRSTQN CWATKQVQRS
201: DGDATVFEVT YRGTHTCSQA ITRTPPLASP EKRQDTRVKP AITQKPKDIL ESLKSNLTVR TDGLDDGKDV FSFPDTPPFY NYGTINGEFG HVESSPIFDV
301: VDWFNPTVEI DTTFPAFLHE SIYY
101: PASINGSPRS EEFADGGGSS ESHHRQDYIF NSKKRKMLPK WSEKVRISPE RGLEGPQDDV FSWRKYGQKD ILGAKFPRSY YRCTHRSTQN CWATKQVQRS
201: DGDATVFEVT YRGTHTCSQA ITRTPPLASP EKRQDTRVKP AITQKPKDIL ESLKSNLTVR TDGLDDGKDV FSFPDTPPFY NYGTINGEFG HVESSPIFDV
301: VDWFNPTVEI DTTFPAFLHE SIYY
Arabidopsis Description
WRKY53Probable WRKY transcription factor 53 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUP6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.