Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G185700.1 | Wheat | nucleus | 93.35 | 92.55 |
| TraesCS5D01G190800.1 | Wheat | nucleus | 92.49 | 91.17 |
| HORVU5Hr1G056130.2 | Barley | nucleus | 89.88 | 79.34 |
| TraesCS5B01G183700.1 | Wheat | nucleus | 68.21 | 69.62 |
| TraesCS2B01G187500.1 | Wheat | nucleus | 39.31 | 46.42 |
| GSMUA_Achr3P15840_001 | Banana | nucleus | 30.06 | 41.77 |
| GSMUA_Achr3P25080_001 | Banana | nucleus | 34.1 | 35.54 |
| VIT_15s0046g01140.t01 | Wine grape | nucleus | 32.66 | 34.98 |
| TraesCS1B01G440600.1 | Wheat | nucleus | 23.99 | 34.87 |
| TraesCS1B01G440700.1 | Wheat | nucleus | 23.41 | 33.61 |
| TraesCS1B01G440300.1 | Wheat | nucleus | 23.41 | 33.06 |
| KRH77637 | Soybean | nucleus | 29.77 | 31.99 |
| VIT_02s0025g01280.t01 | Wine grape | nucleus | 31.5 | 31.87 |
| KRH53440 | Soybean | nucleus | 33.53 | 31.87 |
| Solyc08g082110.2.1 | Tomato | nucleus | 31.21 | 31.86 |
| KRH64503 | Soybean | nucleus | 33.24 | 31.59 |
| PGSC0003DMT400031695 | Potato | nucleus | 30.92 | 31.56 |
| KRH68901 | Soybean | nucleus | 32.95 | 31.49 |
| PGSC0003DMT400051194 | Potato | nucleus | 26.3 | 31.38 |
| VIT_16s0050g02510.t01 | Wine grape | nucleus | 32.95 | 31.32 |
| Solyc10g009550.2.1 | Tomato | nucleus | 25.72 | 30.69 |
| KRG97154 | Soybean | nucleus | 32.08 | 30.66 |
| Bra019265.1-P | Field mustard | nucleus | 28.61 | 30.65 |
| CDY03518 | Canola | nucleus | 27.75 | 30.48 |
| KRH41300 | Soybean | nucleus | 31.5 | 30.36 |
| AT4G11070.1 | Thale cress | nucleus | 27.46 | 30.35 |
| CDX94221 | Canola | nucleus | 28.03 | 30.22 |
| AT2G46400.1 | Thale cress | nucleus | 25.72 | 30.17 |
| CDY10969 | Canola | nucleus | 28.03 | 30.03 |
| KRH06499 | Soybean | nucleus | 32.37 | 30.03 |
| TraesCS1B01G440500.1 | Wheat | nucleus | 22.54 | 29.89 |
| CDY47621 | Canola | nucleus | 27.17 | 29.75 |
| Bra013732.1-P | Field mustard | nucleus | 27.17 | 29.75 |
| CDY65042 | Canola | nucleus | 28.32 | 29.7 |
| AT4G23810.1 | Thale cress | nucleus | 27.75 | 29.63 |
| Bra000423.1-P | Field mustard | nucleus | 23.99 | 29.54 |
| KRH47935 | Soybean | nucleus | 31.21 | 29.27 |
| CDX95699 | Canola | nucleus | 23.7 | 28.77 |
| CDY25271 | Canola | nucleus | 27.46 | 28.7 |
| Bra033158.1-P | Field mustard | nucleus | 27.46 | 28.7 |
| KRH60029 | Soybean | nucleus | 30.06 | 28.65 |
| PGSC0003DMT400014949 | Potato | nucleus | 29.77 | 28.61 |
| CDX89127 | Canola | nucleus | 22.83 | 28.52 |
| Bra014426.1-P | Field mustard | nucleus | 22.83 | 28.52 |
| Bra004540.1-P | Field mustard | nucleus | 23.41 | 28.42 |
| CDX83367 | Canola | nucleus | 22.83 | 28.42 |
| PGSC0003DMT400000599 | Potato | nucleus | 28.32 | 28.32 |
| CDY42043 | Canola | nucleus | 23.7 | 27.99 |
| CDX80414 | Canola | nucleus | 25.14 | 27.8 |
| Solyc08g008280.2.1 | Tomato | nucleus | 28.9 | 27.78 |
| CDX80015 | Canola | nucleus | 23.7 | 27.7 |
| AT5G24110.1 | Thale cress | nucleus | 23.99 | 27.39 |
| Solyc01g095630.2.1 | Tomato | nucleus | 26.59 | 27.38 |
| Solyc05g050310.1.1 | Tomato | cytosol, nucleus | 4.62 | 27.12 |
| CDX87141 | Canola | nucleus | 24.28 | 26.92 |
| Solyc03g007380.1.1 | Tomato | nucleus | 27.46 | 26.91 |
| CDX88077 | Canola | nucleus | 24.28 | 26.84 |
| Bra009734.1-P | Field mustard | nucleus | 24.28 | 26.84 |
| Bra026467.1-P | Field mustard | nucleus | 23.99 | 26.6 |
| PGSC0003DMT400023502 | Potato | nucleus | 27.17 | 26.4 |
| CDY19847 | Canola | nucleus | 23.7 | 26.28 |
| TraesCS7B01G249700.1 | Wheat | nucleus | 19.65 | 24.82 |
| TraesCS4B01G176700.1 | Wheat | nucleus | 14.45 | 24.27 |
| Solyc05g050300.1.1 | Tomato | nucleus | 13.58 | 24.1 |
| TraesCS3B01G375200.1 | Wheat | nucleus | 17.63 | 23.92 |
| PGSC0003DMT400084227 | Potato | nucleus | 20.23 | 23.81 |
| TraesCS3B01G375800.1 | Wheat | nucleus | 18.5 | 23.79 |
| TraesCS7B01G012600.1 | Wheat | nucleus | 25.43 | 23.72 |
| TraesCS4B01G121500.1 | Wheat | nucleus | 15.03 | 23.42 |
| Solyc05g050330.2.1 | Tomato | nucleus | 16.47 | 23.36 |
| TraesCS3B01G375700.1 | Wheat | nucleus | 17.92 | 22.79 |
| TraesCS3B01G375300.1 | Wheat | nucleus | 17.34 | 22.64 |
| PGSC0003DMT400046351 | Potato | nucleus | 19.36 | 22.26 |
| TraesCS4B01G170100.1 | Wheat | nucleus | 19.36 | 22.19 |
| TraesCS2B01G056400.1 | Wheat | nucleus, plastid | 18.21 | 21.88 |
| PGSC0003DMT400084214 | Potato | nucleus | 20.52 | 21.45 |
| TraesCS2B01G517400.1 | Wheat | nucleus | 18.21 | 21.21 |
| Solyc05g050340.2.1 | Tomato | nucleus | 19.65 | 20.8 |
| TraesCS2B01G056300.1 | Wheat | nucleus | 16.76 | 20.64 |
| TraesCS1B01G243100.1 | Wheat | nucleus | 20.52 | 19.78 |
| TraesCS1B01G310900.1 | Wheat | nucleus | 16.18 | 19.58 |
| TraesCS1B01G311000.1 | Wheat | nucleus | 16.18 | 19.44 |
| TraesCS3B01G375600.1 | Wheat | nucleus | 17.63 | 18.94 |
| CDX80415 | Canola | nucleus | 8.09 | 18.92 |
| TraesCS6B01G108000.1 | Wheat | nucleus | 21.39 | 18.88 |
| TraesCS2B01G121800.1 | Wheat | nucleus | 17.92 | 17.87 |
| TraesCS2B01G121900.1 | Wheat | nucleus | 18.5 | 16.84 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR32096 | PANTHER:PTHR32096:SF33 | SMART:SM00774 | SUPFAM:SSF118290 | EnsemblPlantsGene:TraesCS5B01G183800 | EnsemblPlants:TraesCS5B01G183800.1 |
| InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr5B:+:334682766..334684311
Molecular Weight (calculated)
36655.7 Da
IEP (calculated)
6.400
GRAVY (calculated)
-0.381
Length
346 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAVHEGNGG GSGLVVTELS HIKELVKQLD VHLGGSPDLC KLLAQQIFAV TERSIGMIKS GHFNGPKRSA AGAGLDSPPL SATPSPVSGV SNTPFKPNKK
101: RKTSEKGRHQ IRVSSAAGGA DAPADDGHSW RKYGQKDILG AQHPRAYYRC TYQKTQGCAA TKQVQRADED PALFDVIYHG EHTCVHKTAA AAGMVQPAGQ
201: NPDAQSLLQS LSSSLTVKTE GLTAAGTQGW STTTPFSFSS PAVSGMTPAE HHPFSTPSTP ENCFVSMPTS LEPSPATSGS NHMCMTPFHV HSELQTMVSA
301: LVEATSMPAA DTEEAAFSYW GFDDSALHVN NLDEDVNNFD ISTFFA
101: RKTSEKGRHQ IRVSSAAGGA DAPADDGHSW RKYGQKDILG AQHPRAYYRC TYQKTQGCAA TKQVQRADED PALFDVIYHG EHTCVHKTAA AAGMVQPAGQ
201: NPDAQSLLQS LSSSLTVKTE GLTAAGTQGW STTTPFSFSS PAVSGMTPAE HHPFSTPSTP ENCFVSMPTS LEPSPATSGS NHMCMTPFHV HSELQTMVSA
301: LVEATSMPAA DTEEAAFSYW GFDDSALHVN NLDEDVNNFD ISTFFA
001: MMMEEKLVIN ELELGKELAN RLMNNLKHTS SVDSNKTLIS DILRIYQNAI FMLSFNQDKN ILKRSLEIDG KDSKNVFKKR KVSEKNTEKV KVFVATEQEN
101: GSIDDGHCWR KYGQKEIHGS KNPRAYYRCT HRFTQDCLAV KQVQKSDTDP SLFEVKYLGN HTCNNITSPK TTTNFSVSLT NTNIFEGNRV HVTEQSEDMK
201: PTKSEEVMIS LEDLENKKNI FRTFSFSNHE IENGVWKSNL FLGNFVEDLS PATSGSAITS EVLSAPAAVE NSETADSYFS SLDNIIDFGQ DWLWS
101: GSIDDGHCWR KYGQKEIHGS KNPRAYYRCT HRFTQDCLAV KQVQKSDTDP SLFEVKYLGN HTCNNITSPK TTTNFSVSLT NTNIFEGNRV HVTEQSEDMK
201: PTKSEEVMIS LEDLENKKNI FRTFSFSNHE IENGVWKSNL FLGNFVEDLS PATSGSAITS EVLSAPAAVE NSETADSYFS SLDNIIDFGQ DWLWS
Arabidopsis Description
WRKY46Probable WRKY transcription factor 46 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKD9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.