Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g082110.2.1 | Tomato | nucleus | 95.58 | 95.58 |
| PGSC0003DMT400014949 | Potato | nucleus | 65.49 | 61.67 |
| VIT_02s0025g01280.t01 | Wine grape | nucleus | 45.43 | 45.03 |
| KRH41300 | Soybean | nucleus | 47.2 | 44.57 |
| KRH60029 | Soybean | nucleus | 45.13 | 42.15 |
| KRH77637 | Soybean | nucleus | 39.23 | 41.3 |
| AT4G11070.1 | Thale cress | nucleus | 37.46 | 40.58 |
| Bra019265.1-P | Field mustard | nucleus | 37.46 | 39.32 |
| CDX94221 | Canola | nucleus | 37.17 | 39.25 |
| CDY47621 | Canola | nucleus | 36.58 | 39.24 |
| CDY65042 | Canola | nucleus | 38.05 | 39.09 |
| CDY03518 | Canola | nucleus | 36.28 | 39.05 |
| CDY10969 | Canola | nucleus | 37.17 | 39.01 |
| Bra013732.1-P | Field mustard | nucleus | 36.28 | 38.92 |
| CDY25271 | Canola | nucleus | 37.46 | 38.37 |
| Bra033158.1-P | Field mustard | nucleus | 37.46 | 38.37 |
| GSMUA_Achr3P15840_001 | Banana | nucleus | 28.02 | 38.15 |
| PGSC0003DMT400051194 | Potato | nucleus | 32.15 | 37.59 |
| AT4G23810.1 | Thale cress | nucleus | 35.1 | 36.73 |
| PGSC0003DMT400000599 | Potato | nucleus | 36.58 | 35.84 |
| GSMUA_Achr7P14140_001 | Banana | nucleus | 37.76 | 35.56 |
| GSMUA_Achr3P25080_001 | Banana | nucleus | 33.92 | 34.64 |
| GSMUA_Achr6P05710_001 | Banana | nucleus | 34.51 | 34.41 |
| HORVU5Hr1G034830.3 | Barley | nucleus | 33.63 | 34.34 |
| TraesCS5B01G183700.1 | Wheat | nucleus | 33.92 | 33.92 |
| HORVU3Hr1G058670.1 | Barley | nucleus | 24.78 | 33.73 |
| GSMUA_Achr1P27980_001 | Banana | nucleus | 30.68 | 33.55 |
| TraesCS5D01G190700.1 | Wheat | nucleus | 33.63 | 33.43 |
| TraesCS3D01G238300.1 | Wheat | nucleus | 28.61 | 33.33 |
| TraesCS5A01G185600.1 | Wheat | nucleus | 33.63 | 33.24 |
| Os01t0656400-00 | Rice | nucleus | 26.84 | 33.21 |
| Zm00001d020136_P001 | Maize | nucleus | 29.5 | 33.11 |
| TraesCS2B01G187500.1 | Wheat | nucleus | 28.61 | 33.11 |
| TraesCS2D01G168600.1 | Wheat | nucleus | 28.32 | 32.76 |
| Zm00001d050247_P001 | Maize | nucleus | 30.68 | 32.5 |
| HORVU3Hr1G059220.1 | Barley | nucleus | 29.5 | 32.47 |
| HORVU3Hr1G059210.1 | Barley | nucleus | 23.3 | 32.38 |
| EER96589 | Sorghum | nucleus | 29.5 | 32.26 |
| TraesCS2A01G161500.1 | Wheat | nucleus | 28.02 | 32.09 |
| Zm00001d032265_P001 | Maize | nucleus | 31.27 | 31.83 |
| Os05t0571200-01 | Rice | nucleus | 25.96 | 31.77 |
| PGSC0003DMT400023502 | Potato | nucleus | 33.33 | 31.74 |
| Os08t0386200-01 | Rice | nucleus | 29.79 | 31.66 |
| Os11t0685700-00 | Rice | nucleus | 17.7 | 31.25 |
| TraesCS5D01G190800.1 | Wheat | nucleus | 32.15 | 31.05 |
| TraesCS5A01G185700.1 | Wheat | nucleus | 31.86 | 30.95 |
| TraesCS5B01G183800.1 | Wheat | nucleus | 31.56 | 30.92 |
| OQU80381 | Sorghum | nucleus | 30.97 | 30.88 |
| HORVU2Hr1G029430.2 | Barley | mitochondrion, nucleus | 22.12 | 30.74 |
| TraesCS1B01G440700.1 | Wheat | nucleus | 21.53 | 30.29 |
| GSMUA_AchrUn_... | Banana | nucleus | 26.25 | 30.17 |
| TraesCS1B01G440600.1 | Wheat | nucleus | 20.94 | 29.83 |
| TraesCS1D01G418400.1 | Wheat | nucleus | 22.42 | 29.8 |
| EES18716 | Sorghum | nucleus | 23.89 | 29.78 |
| TraesCS1D01G418500.1 | Wheat | nucleus | 21.24 | 29.75 |
| Zm00001d011496_P002 | Maize | nucleus | 28.32 | 29.36 |
| EES03370 | Sorghum | nucleus | 29.79 | 29.19 |
| TraesCS1D01G418600.1 | Wheat | nucleus | 21.24 | 29.15 |
| HORVU1Hr1G090110.1 | Barley | nucleus | 21.24 | 28.46 |
| Zm00001d020137_P001 | Maize | nucleus | 27.14 | 28.4 |
| TraesCS1B01G440500.1 | Wheat | nucleus | 21.83 | 28.35 |
| HORVU1Hr1G090190.2 | Barley | nucleus | 21.24 | 28.35 |
| PGSC0003DMT400021625 | Potato | nucleus | 17.99 | 27.98 |
| HORVU1Hr1G090170.1 | Barley | nucleus | 20.35 | 27.94 |
| EER96590 | Sorghum | nucleus | 26.84 | 27.74 |
| HORVU1Hr1G090130.4 | Barley | nucleus | 21.24 | 27.69 |
| HORVU5Hr1G056130.2 | Barley | nucleus | 31.86 | 27.55 |
| TraesCS1A01G410700.1 | Wheat | nucleus | 20.06 | 27.53 |
| Os09t0334500-01 | Rice | nucleus | 29.2 | 27.42 |
| TraesCS1B01G440300.1 | Wheat | nucleus | 19.76 | 27.35 |
| EER87882 | Sorghum | nucleus | 30.38 | 27.25 |
| TraesCS1D01G418000.1 | Wheat | nucleus | 19.76 | 27.24 |
| Zm00001d044010_P001 | Maize | nucleus | 26.84 | 27.16 |
| HORVU0Hr1G012750.1 | Barley | nucleus | 26.55 | 27.11 |
| Zm00001d005622_P001 | Maize | nucleus | 26.25 | 26.89 |
| Zm00001d036244_P001 | Maize | nucleus | 28.91 | 26.78 |
| GSMUA_Achr10P... | Banana | extracellular, nucleus | 24.48 | 26.77 |
| TraesCS7B01G012600.1 | Wheat | nucleus | 29.2 | 26.68 |
| PGSC0003DMT400070939 | Potato | nucleus | 17.4 | 26.46 |
| HORVU0Hr1G012740.1 | Barley | nucleus | 25.07 | 26.32 |
| Os06t0158100-00 | Rice | nucleus | 30.09 | 26.09 |
| TraesCS1A01G410500.1 | Wheat | nucleus | 19.47 | 26.09 |
| PGSC0003DMT400084227 | Potato | nucleus | 22.42 | 25.85 |
| TraesCS7D01G110600.1 | Wheat | nucleus | 28.02 | 25.82 |
| Zm00001d045283_P001 | Maize | nucleus | 30.09 | 25.76 |
| Zm00001d009619_P002 | Maize | nucleus | 22.42 | 25.59 |
| PGSC0003DMT400046351 | Potato | nucleus | 22.42 | 25.25 |
| GSMUA_Achr4P15640_001 | Banana | nucleus | 25.96 | 25.21 |
| TraesCS7A01G116000.1 | Wheat | nucleus | 27.73 | 24.93 |
| PGSC0003DMT400084214 | Potato | nucleus | 23.3 | 23.87 |
| TraesCS1A01G410600.1 | Wheat | nucleus | 15.93 | 23.18 |
| PGSC0003DMT400053122 | Potato | nucleus | 17.99 | 22.02 |
| PGSC0003DMT400075091 | Potato | nucleus | 18.58 | 21.5 |
| PGSC0003DMT400022638 | Potato | nucleus | 17.4 | 17.0 |
Protein Annotations
| EntrezGene:102593434 | MapMan:15.5.22 | Gene3D:2.20.25.80 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | UniProt:M1AW24 |
| PFAM:PF03106 | EnsemblPlantsGene:PGSC0003DMG400012160 | PGSC:PGSC0003DMG400012160 | EnsemblPlants:PGSC0003DMT400031695 | PFscan:PS50811 | PANTHER:PTHR32096 |
| PANTHER:PTHR32096:SF36 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI00029597E7 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| RefSeq:XP_006343875.1 | : | : | : | : | : |
Description
WRKY transcription factor-30 [Source:PGSC_GENE;Acc:PGSC0003DMG400012160]
Coordinates
chr8:-:55744934..55747844
Molecular Weight (calculated)
38572.6 Da
IEP (calculated)
5.386
GRAVY (calculated)
-0.730
Length
339 amino acids
Sequence
(BLAST)
(BLAST)
001: MDCGFNYEYN SLINELTQGL EHVKQLRASN KIQELDFHLQ MILSSFEKSL SILNWTSASV TQTPLLVAPP ESSISVDENP KSDDQDFIYV SKKRKQMPTW
101: SEQVRVSAEN GYEGPTDDGY SWRKYGQKDI LGAKYPRSYY RCTYRLMQNC WATKQVQRSD DDPALFEITY KGSHTCNQTY NCAAAATQPK SPEKHKHKKQ
201: ANNPRTTPSN QMLANLQANL RVNTNDLDKK EATCSFPFSP TFSGFVDENL HFQMSQVDDN LVGGYSPSFV SPTTPESSYF SLPTCQMNDS QRIYNVHHSE
301: SDLPDLFSAN TSSTSSPIIG LEFPLEHVEF DPNFSDFFR
101: SEQVRVSAEN GYEGPTDDGY SWRKYGQKDI LGAKYPRSYY RCTYRLMQNC WATKQVQRSD DDPALFEITY KGSHTCNQTY NCAAAATQPK SPEKHKHKKQ
201: ANNPRTTPSN QMLANLQANL RVNTNDLDKK EATCSFPFSP TFSGFVDENL HFQMSQVDDN LVGGYSPSFV SPTTPESSYF SLPTCQMNDS QRIYNVHHSE
301: SDLPDLFSAN TSSTSSPIIG LEFPLEHVEF DPNFSDFFR
001: MEGRDMLSWE QKTLLSELIN GFDAAKKLQA RLREAPSPSS SFSSPATAVA ETNEILVKQI VSSYERSLLL LNWSSSPSVQ LIPTPVTVVP VANPGSVPES
101: PASINGSPRS EEFADGGGSS ESHHRQDYIF NSKKRKMLPK WSEKVRISPE RGLEGPQDDV FSWRKYGQKD ILGAKFPRSY YRCTHRSTQN CWATKQVQRS
201: DGDATVFEVT YRGTHTCSQA ITRTPPLASP EKRQDTRVKP AITQKPKDIL ESLKSNLTVR TDGLDDGKDV FSFPDTPPFY NYGTINGEFG HVESSPIFDV
301: VDWFNPTVEI DTTFPAFLHE SIYY
101: PASINGSPRS EEFADGGGSS ESHHRQDYIF NSKKRKMLPK WSEKVRISPE RGLEGPQDDV FSWRKYGQKD ILGAKFPRSY YRCTHRSTQN CWATKQVQRS
201: DGDATVFEVT YRGTHTCSQA ITRTPPLASP EKRQDTRVKP AITQKPKDIL ESLKSNLTVR TDGLDDGKDV FSFPDTPPFY NYGTINGEFG HVESSPIFDV
301: VDWFNPTVEI DTTFPAFLHE SIYY
Arabidopsis Description
WRKY53Probable WRKY transcription factor 53 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUP6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.