Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G012600.1 | Wheat | nucleus | 93.75 | 92.99 |
| TraesCS7A01G116000.1 | Wheat | nucleus | 92.93 | 90.72 |
| Os06t0158100-00 | Rice | nucleus | 56.79 | 53.45 |
| EER87882 | Sorghum | nucleus | 49.18 | 47.88 |
| Zm00001d045283_P001 | Maize | nucleus | 50.27 | 46.72 |
| Zm00001d036244_P001 | Maize | nucleus | 45.65 | 45.9 |
| VIT_15s0046g01140.t01 | Wine grape | nucleus | 29.62 | 33.75 |
| GSMUA_Achr1P27980_001 | Banana | nucleus | 26.36 | 31.29 |
| CDY03518 | Canola | nucleus | 26.63 | 31.11 |
| TraesCS2D01G168600.1 | Wheat | nucleus | 24.73 | 31.06 |
| AT4G23810.1 | Thale cress | nucleus | 27.17 | 30.86 |
| CDX94221 | Canola | nucleus | 26.9 | 30.84 |
| Bra013732.1-P | Field mustard | nucleus | 26.09 | 30.38 |
| Bra019265.1-P | Field mustard | nucleus | 26.63 | 30.34 |
| TraesCS1D01G418500.1 | Wheat | nucleus | 19.84 | 30.17 |
| CDY47621 | Canola | nucleus | 25.82 | 30.06 |
| TraesCS1D01G418600.1 | Wheat | nucleus | 20.11 | 29.96 |
| CDY10969 | Canola | nucleus | 26.09 | 29.72 |
| KRH68901 | Soybean | nucleus | 29.08 | 29.56 |
| VIT_16s0050g02510.t01 | Wine grape | nucleus | 29.08 | 29.4 |
| TraesCS3D01G238300.1 | Wheat | nucleus | 22.83 | 28.87 |
| KRG97154 | Soybean | nucleus | 28.26 | 28.73 |
| Solyc08g082110.2.1 | Tomato | nucleus | 26.36 | 28.61 |
| KRH64503 | Soybean | nucleus | 28.26 | 28.57 |
| GSMUA_AchrUn_... | Banana | nucleus | 22.83 | 28.47 |
| KRH53440 | Soybean | nucleus | 27.99 | 28.3 |
| KRH77637 | Soybean | nucleus | 24.73 | 28.26 |
| TraesCS1D01G418000.1 | Wheat | nucleus | 18.75 | 28.05 |
| PGSC0003DMT400031695 | Potato | nucleus | 25.82 | 28.02 |
| Solyc10g009550.2.1 | Tomato | nucleus | 22.01 | 27.93 |
| TraesCS1D01G418400.1 | Wheat | nucleus | 19.29 | 27.84 |
| AT4G11070.1 | Thale cress | nucleus | 23.64 | 27.8 |
| CDX88077 | Canola | nucleus | 23.64 | 27.8 |
| CDX80414 | Canola | nucleus | 23.64 | 27.8 |
| Bra009734.1-P | Field mustard | nucleus | 23.64 | 27.8 |
| PGSC0003DMT400014949 | Potato | nucleus | 27.17 | 27.78 |
| CDY65042 | Canola | nucleus | 24.73 | 27.58 |
| CDX87141 | Canola | nucleus | 23.37 | 27.56 |
| Bra026467.1-P | Field mustard | nucleus | 23.37 | 27.56 |
| VIT_02s0025g01280.t01 | Wine grape | nucleus | 25.54 | 27.49 |
| AT5G24110.1 | Thale cress | nucleus | 22.55 | 27.39 |
| Bra004540.1-P | Field mustard | nucleus | 21.2 | 27.37 |
| PGSC0003DMT400051194 | Potato | nucleus | 21.47 | 27.24 |
| CDX80015 | Canola | nucleus | 21.74 | 27.03 |
| TraesCS5D01G190700.1 | Wheat | nucleus | 25.0 | 26.98 |
| CDY42043 | Canola | nucleus | 21.47 | 26.96 |
| Solyc08g008280.2.1 | Tomato | nucleus | 26.36 | 26.94 |
| CDY19847 | Canola | nucleus | 22.83 | 26.92 |
| Bra033158.1-P | Field mustard | nucleus | 24.18 | 26.89 |
| CDY25271 | Canola | nucleus | 24.18 | 26.89 |
| Bra014426.1-P | Field mustard | nucleus | 20.11 | 26.71 |
| CDX89127 | Canola | nucleus | 20.11 | 26.71 |
| AT2G46400.1 | Thale cress | nucleus | 21.2 | 26.44 |
| KRH47935 | Soybean | nucleus | 26.36 | 26.29 |
| Bra000423.1-P | Field mustard | nucleus | 19.84 | 25.98 |
| KRH06499 | Soybean | nucleus | 26.09 | 25.74 |
| TraesCS5D01G190800.1 | Wheat | nucleus | 24.46 | 25.64 |
| KRH60029 | Soybean | nucleus | 25.27 | 25.62 |
| CDX95699 | Canola | nucleus | 19.57 | 25.26 |
| CDX83367 | Canola | nucleus | 19.02 | 25.18 |
| Solyc05g050300.1.1 | Tomato | nucleus | 13.32 | 25.13 |
| PGSC0003DMT400000599 | Potato | nucleus | 23.1 | 24.57 |
| KRH41300 | Soybean | nucleus | 23.64 | 24.23 |
| Solyc01g095630.2.1 | Tomato | nucleus | 21.74 | 23.81 |
| Solyc03g007380.1.1 | Tomato | nucleus | 22.83 | 23.8 |
| TraesCS7D01G345700.1 | Wheat | nucleus | 19.02 | 23.49 |
| PGSC0003DMT400023502 | Potato | nucleus | 22.55 | 23.31 |
| TraesCS3D01G337500.1 | Wheat | nucleus | 16.85 | 22.96 |
| TraesCS1D01G300700.1 | Wheat | nucleus | 18.75 | 22.77 |
| TraesCS2D01G489700.1 | Wheat | nucleus | 17.93 | 22.53 |
| TraesCS3D01G337600.1 | Wheat | nucleus | 16.3 | 22.14 |
| TraesCS1D01G300500.1 | Wheat | plastid | 18.21 | 21.82 |
| GSMUA_Achr4P15640_001 | Banana | nucleus | 20.38 | 21.49 |
| TraesCS4D01G172200.1 | Wheat | nucleus | 17.39 | 21.4 |
| TraesCS3D01G337100.1 | Wheat | nucleus | 15.49 | 21.35 |
| PGSC0003DMT400046351 | Potato | nucleus | 17.39 | 21.26 |
| TraesCS4D01G119700.1 | Wheat | nucleus | 12.5 | 20.72 |
| Solyc05g050330.2.1 | Tomato | nucleus | 13.59 | 20.49 |
| TraesCS3D01G337000.1 | Wheat | nucleus | 14.13 | 20.39 |
| TraesCS4D01G178400.1 | Wheat | nucleus | 11.41 | 20.39 |
| TraesCS2D01G042700.1 | Wheat | nucleus | 16.03 | 20.14 |
| TraesCS3D01G337400.1 | Wheat | nucleus | 17.39 | 19.88 |
| TraesCS1D01G300300.1 | Wheat | nucleus | 16.58 | 19.87 |
| PGSC0003DMT400084227 | Potato | nucleus | 15.49 | 19.39 |
| TraesCS2D01G104500.1 | Wheat | nucleus | 17.66 | 18.52 |
| TraesCS2D01G104700.1 | Wheat | nucleus | 17.12 | 18.21 |
| TraesCS2D01G104600.1 | Wheat | nucleus | 16.3 | 17.86 |
| TraesCS6D01G074200.1 | Wheat | nucleus | 18.75 | 17.69 |
| PGSC0003DMT400084214 | Potato | nucleus | 15.76 | 17.52 |
| Solyc05g050310.1.1 | Tomato | cytosol, nucleus | 2.72 | 16.95 |
| TraesCS1D01G300900.1 | Wheat | nucleus | 13.32 | 16.9 |
| Solyc05g050340.2.1 | Tomato | nucleus | 14.95 | 16.82 |
| TraesCS1D01G300600.1 | Wheat | nucleus | 13.04 | 16.72 |
| TraesCS1D01G300400.1 | Wheat | nucleus | 12.5 | 16.03 |
| TraesCS2D01G497600.1 | Wheat | nucleus | 14.67 | 14.92 |
| TraesCS2D01G497700.1 | Wheat | nucleus | 14.13 | 14.4 |
| CDX80415 | Canola | nucleus | 5.71 | 14.19 |
| TraesCS3D01G337300.1 | Wheat | nucleus | 12.77 | 12.53 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR32096 | PANTHER:PTHR32096:SF24 | SMART:SM00774 | SUPFAM:SSF118290 | EnsemblPlantsGene:TraesCS7D01G110600 | EnsemblPlants:TraesCS7D01G110600.1 |
| InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr7D:-:66695749..66698927
Molecular Weight (calculated)
38794.0 Da
IEP (calculated)
5.565
GRAVY (calculated)
-0.532
Length
368 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDGGGGGGG GDGNSMHLLL SILADGEEQA RRLLGELPPA DDEGQLLGQG PAAECCRGVA EQLLCTFRKA IAVAKAIEAA GGDSPRSANE GGAGMAGRDA
101: AQAQERQGQG VCKRRKGLPR WTEKFRIPDD ANLEYTPDDG FSWRKYGQKD ILGAKFPRGY YRCTYRNAQG CAATRQVQRS DADLAVFDVT YQGAHTCLQA
201: QRRAAAPPPP PDVQRSPPAL QDPDMQLLEN FRNGLKVETD GLPPPPPCFH GDGTTAFSFA YAAAGAAGYS PAESGGQRLL QGGGCFAPAT FSSPAATTSA
301: GPGYFAHCTR GAHESPELAE VVSAATASDR AGFDYSMYLH QHDLDAHLPF PFDPMFGHPS SHGQHGDA
101: AQAQERQGQG VCKRRKGLPR WTEKFRIPDD ANLEYTPDDG FSWRKYGQKD ILGAKFPRGY YRCTYRNAQG CAATRQVQRS DADLAVFDVT YQGAHTCLQA
201: QRRAAAPPPP PDVQRSPPAL QDPDMQLLEN FRNGLKVETD GLPPPPPCFH GDGTTAFSFA YAAAGAAGYS PAESGGQRLL QGGGCFAPAT FSSPAATTSA
301: GPGYFAHCTR GAHESPELAE VVSAATASDR AGFDYSMYLH QHDLDAHLPF PFDPMFGHPS SHGQHGDA
001: MEGRDMLSWE QKTLLSELIN GFDAAKKLQA RLREAPSPSS SFSSPATAVA ETNEILVKQI VSSYERSLLL LNWSSSPSVQ LIPTPVTVVP VANPGSVPES
101: PASINGSPRS EEFADGGGSS ESHHRQDYIF NSKKRKMLPK WSEKVRISPE RGLEGPQDDV FSWRKYGQKD ILGAKFPRSY YRCTHRSTQN CWATKQVQRS
201: DGDATVFEVT YRGTHTCSQA ITRTPPLASP EKRQDTRVKP AITQKPKDIL ESLKSNLTVR TDGLDDGKDV FSFPDTPPFY NYGTINGEFG HVESSPIFDV
301: VDWFNPTVEI DTTFPAFLHE SIYY
101: PASINGSPRS EEFADGGGSS ESHHRQDYIF NSKKRKMLPK WSEKVRISPE RGLEGPQDDV FSWRKYGQKD ILGAKFPRSY YRCTHRSTQN CWATKQVQRS
201: DGDATVFEVT YRGTHTCSQA ITRTPPLASP EKRQDTRVKP AITQKPKDIL ESLKSNLTVR TDGLDDGKDV FSFPDTPPFY NYGTINGEFG HVESSPIFDV
301: VDWFNPTVEI DTTFPAFLHE SIYY
Arabidopsis Description
WRKY53Probable WRKY transcription factor 53 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUP6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.