Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G375300.1 | Wheat | nucleus | 93.63 | 94.34 |
| TraesCS3A01G343100.1 | Wheat | nucleus | 93.63 | 94.34 |
| HORVU3Hr1G080890.1 | Barley | nucleus, plastid, vacuole | 79.78 | 72.45 |
| Os01t0820700-00 | Rice | nucleus | 70.04 | 66.08 |
| EES01667 | Sorghum | nucleus | 55.43 | 56.06 |
| Zm00001d043063_P001 | Maize | nucleus | 52.43 | 53.23 |
| TraesCS4D01G178400.1 | Wheat | nucleus | 17.98 | 23.3 |
| TraesCS3D01G337000.1 | Wheat | nucleus | 20.6 | 21.57 |
| TraesCS4D01G119700.1 | Wheat | nucleus | 17.6 | 21.17 |
| TraesCS3D01G238300.1 | Wheat | nucleus | 21.35 | 19.59 |
| TraesCS2D01G168600.1 | Wheat | nucleus | 20.97 | 19.11 |
| TraesCS1D01G300400.1 | Wheat | nucleus | 20.22 | 18.82 |
| TraesCS1D01G418500.1 | Wheat | nucleus | 16.85 | 18.59 |
| TraesCS3D01G337500.1 | Wheat | nucleus | 18.35 | 18.15 |
| TraesCS1D01G300600.1 | Wheat | nucleus | 19.48 | 18.12 |
| TraesCS5D01G190800.1 | Wheat | nucleus | 23.6 | 17.95 |
| TraesCS1D01G418600.1 | Wheat | nucleus | 16.48 | 17.81 |
| TraesCS3D01G337600.1 | Wheat | nucleus | 17.98 | 17.71 |
| TraesCS1D01G418400.1 | Wheat | nucleus | 16.85 | 17.65 |
| TraesCS5D01G190700.1 | Wheat | nucleus | 21.72 | 17.01 |
| TraesCS1D01G300900.1 | Wheat | nucleus | 18.35 | 16.9 |
| TraesCS4D01G172200.1 | Wheat | nucleus | 18.73 | 16.72 |
| TraesCS1D01G300700.1 | Wheat | nucleus | 18.73 | 16.5 |
| TraesCS3D01G337400.1 | Wheat | nucleus | 19.85 | 16.46 |
| TraesCS2D01G042700.1 | Wheat | nucleus | 17.98 | 16.38 |
| TraesCS2D01G497600.1 | Wheat | nucleus | 21.72 | 16.02 |
| TraesCS1D01G418000.1 | Wheat | nucleus | 14.61 | 15.85 |
| TraesCS2D01G489700.1 | Wheat | nucleus | 17.23 | 15.7 |
| TraesCS2D01G104500.1 | Wheat | nucleus | 20.6 | 15.67 |
| TraesCS1D01G300500.1 | Wheat | plastid | 17.98 | 15.64 |
| TraesCS2D01G104700.1 | Wheat | nucleus | 20.22 | 15.61 |
| TraesCS7D01G110600.1 | Wheat | nucleus | 21.35 | 15.49 |
| TraesCS7D01G345700.1 | Wheat | nucleus | 17.23 | 15.44 |
| TraesCS2D01G497700.1 | Wheat | nucleus | 20.6 | 15.24 |
| TraesCS2D01G104600.1 | Wheat | nucleus | 19.1 | 15.18 |
| TraesCS3D01G337300.1 | Wheat | nucleus | 20.97 | 14.93 |
| TraesCS1D01G300300.1 | Wheat | nucleus | 16.85 | 14.66 |
| TraesCS6D01G074200.1 | Wheat | nucleus | 18.73 | 12.82 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR31282 | PANTHER:PTHR31282:SF29 | SMART:SM00774 | SUPFAM:SSF118290 | EnsemblPlantsGene:TraesCS3D01G337100 | EnsemblPlants:TraesCS3D01G337100.1 |
| InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr3D:+:448864412..448869250
Molecular Weight (calculated)
29574.7 Da
IEP (calculated)
6.227
GRAVY (calculated)
-0.926
Length
267 amino acids
Sequence
(BLAST)
(BLAST)
001: MASAPPKGES FDFEDPRAQE AMGSASASCS PAGGVFGVSP PESSRRDSRK RRKDRPSWIK HTFTPHFDGH LWRKYGQKNI KDSAFPRLYY RCSYREDRQC
101: LASKLVQQEN HEDPPLFKVT YTYEHTCNTA PVPTPDVVAE LPAPATGDAL LLRFDSTGAG HRGAHRMEQE RHYQQPAAPG SGWPSMMLSF DSNNRQHEQC
201: TFPSELPPAA SSSSFSTEGL PAPSSTTDGG DDGFSTWDSL RYGLNDHVHF GDHSYLPNSG NDGDDNY
101: LASKLVQQEN HEDPPLFKVT YTYEHTCNTA PVPTPDVVAE LPAPATGDAL LLRFDSTGAG HRGAHRMEQE RHYQQPAAPG SGWPSMMLSF DSNNRQHEQC
201: TFPSELPPAA SSSSFSTEGL PAPSSTTDGG DDGFSTWDSL RYGLNDHVHF GDHSYLPNSG NDGDDNY
001: MMMEEKLVIN ELELGKELAN RLMNNLKHTS SVDSNKTLIS DILRIYQNAI FMLSFNQDKN ILKRSLEIDG KDSKNVFKKR KVSEKNTEKV KVFVATEQEN
101: GSIDDGHCWR KYGQKEIHGS KNPRAYYRCT HRFTQDCLAV KQVQKSDTDP SLFEVKYLGN HTCNNITSPK TTTNFSVSLT NTNIFEGNRV HVTEQSEDMK
201: PTKSEEVMIS LEDLENKKNI FRTFSFSNHE IENGVWKSNL FLGNFVEDLS PATSGSAITS EVLSAPAAVE NSETADSYFS SLDNIIDFGQ DWLWS
101: GSIDDGHCWR KYGQKEIHGS KNPRAYYRCT HRFTQDCLAV KQVQKSDTDP SLFEVKYLGN HTCNNITSPK TTTNFSVSLT NTNIFEGNRV HVTEQSEDMK
201: PTKSEEVMIS LEDLENKKNI FRTFSFSNHE IENGVWKSNL FLGNFVEDLS PATSGSAITS EVLSAPAAVE NSETADSYFS SLDNIIDFGQ DWLWS
Arabidopsis Description
WRKY46Probable WRKY transcription factor 46 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKD9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.