Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G187500.1 | Wheat | nucleus | 95.22 | 95.22 |
| TraesCS2A01G161500.1 | Wheat | nucleus | 95.22 | 94.26 |
| HORVU2Hr1G029430.2 | Barley | mitochondrion, nucleus | 71.33 | 85.66 |
| Os08t0386200-01 | Rice | nucleus | 61.09 | 56.11 |
| OQU80381 | Sorghum | nucleus | 61.43 | 52.94 |
| Zm00001d050247_P001 | Maize | nucleus | 57.34 | 52.5 |
| Zm00001d032265_P001 | Maize | nucleus | 59.39 | 52.25 |
| GSMUA_Achr3P15840_001 | Banana | nucleus | 35.15 | 41.37 |
| TraesCS5D01G190700.1 | Wheat | nucleus | 46.42 | 39.88 |
| TraesCS5D01G190800.1 | Wheat | nucleus | 46.76 | 39.03 |
| TraesCS1D01G418600.1 | Wheat | nucleus | 31.06 | 36.84 |
| TraesCS1D01G418500.1 | Wheat | nucleus | 29.01 | 35.12 |
| TraesCS1D01G418000.1 | Wheat | nucleus | 28.67 | 34.15 |
| GSMUA_Achr3P25080_001 | Banana | nucleus | 38.57 | 34.04 |
| VIT_15s0046g01140.t01 | Wine grape | nucleus | 36.52 | 33.13 |
| TraesCS1D01G418400.1 | Wheat | nucleus | 27.99 | 32.16 |
| TraesCS3D01G238300.1 | Wheat | nucleus | 31.74 | 31.96 |
| Solyc10g009550.2.1 | Tomato | nucleus | 30.72 | 31.03 |
| PGSC0003DMT400051194 | Potato | nucleus | 30.38 | 30.69 |
| VIT_16s0050g02510.t01 | Wine grape | nucleus | 37.2 | 29.95 |
| KRH64503 | Soybean | nucleus | 36.86 | 29.67 |
| KRH53440 | Soybean | nucleus | 36.86 | 29.67 |
| AT2G46400.1 | Thale cress | nucleus | 29.69 | 29.49 |
| VIT_02s0025g01280.t01 | Wine grape | nucleus | 33.79 | 28.95 |
| Bra000423.1-P | Field mustard | nucleus | 27.65 | 28.83 |
| KRH68901 | Soybean | nucleus | 35.49 | 28.73 |
| CDX94221 | Canola | nucleus | 31.4 | 28.66 |
| KRH77637 | Soybean | nucleus | 31.4 | 28.57 |
| CDY03518 | Canola | nucleus | 30.72 | 28.57 |
| Bra019265.1-P | Field mustard | nucleus | 31.4 | 28.48 |
| CDX83367 | Canola | nucleus | 26.96 | 28.42 |
| PGSC0003DMT400014949 | Potato | nucleus | 34.81 | 28.33 |
| PGSC0003DMT400031695 | Potato | nucleus | 32.76 | 28.32 |
| KRG97154 | Soybean | nucleus | 34.81 | 28.18 |
| CDX95699 | Canola | nucleus | 27.3 | 28.07 |
| Bra004540.1-P | Field mustard | nucleus | 27.3 | 28.07 |
| CDY65042 | Canola | nucleus | 31.4 | 27.88 |
| CDY47621 | Canola | nucleus | 30.03 | 27.85 |
| Bra013732.1-P | Field mustard | nucleus | 30.03 | 27.85 |
| AT4G11070.1 | Thale cress | nucleus | 29.69 | 27.8 |
| AT4G23810.1 | Thale cress | nucleus | 30.72 | 27.78 |
| CDX80015 | Canola | nucleus | 27.99 | 27.7 |
| CDY10969 | Canola | nucleus | 30.38 | 27.55 |
| Solyc08g008280.2.1 | Tomato | nucleus | 33.79 | 27.5 |
| Solyc08g082110.2.1 | Tomato | nucleus | 31.74 | 27.43 |
| PGSC0003DMT400000599 | Potato | nucleus | 32.08 | 27.17 |
| Solyc05g050310.1.1 | Tomato | cytosol, nucleus | 5.46 | 27.12 |
| KRH41300 | Soybean | nucleus | 33.11 | 27.02 |
| KRH60029 | Soybean | nucleus | 33.45 | 27.0 |
| CDY42043 | Canola | nucleus | 26.96 | 26.96 |
| CDY25271 | Canola | nucleus | 30.38 | 26.89 |
| Bra033158.1-P | Field mustard | nucleus | 30.38 | 26.89 |
| CDX89127 | Canola | nucleus | 25.26 | 26.71 |
| Bra014426.1-P | Field mustard | nucleus | 25.26 | 26.71 |
| Solyc03g007380.1.1 | Tomato | nucleus | 32.08 | 26.63 |
| Solyc01g095630.2.1 | Tomato | nucleus | 30.38 | 26.49 |
| PGSC0003DMT400023502 | Potato | nucleus | 31.74 | 26.12 |
| CDX87141 | Canola | nucleus | 27.65 | 25.96 |
| Bra026467.1-P | Field mustard | nucleus | 27.65 | 25.96 |
| CDX80414 | Canola | nucleus | 27.65 | 25.88 |
| Solyc05g050330.2.1 | Tomato | nucleus | 21.5 | 25.82 |
| KRH47935 | Soybean | nucleus | 32.42 | 25.75 |
| KRH06499 | Soybean | nucleus | 32.76 | 25.74 |
| CDY19847 | Canola | nucleus | 27.3 | 25.64 |
| Bra009734.1-P | Field mustard | nucleus | 27.3 | 25.56 |
| CDX88077 | Canola | nucleus | 26.96 | 25.24 |
| TraesCS3D01G337500.1 | Wheat | nucleus | 22.87 | 24.81 |
| AT5G24110.1 | Thale cress | nucleus | 25.6 | 24.75 |
| TraesCS7D01G110600.1 | Wheat | nucleus | 31.06 | 24.73 |
| TraesCS3D01G337600.1 | Wheat | nucleus | 22.87 | 24.72 |
| TraesCS7D01G345700.1 | Wheat | nucleus | 23.55 | 23.15 |
| PGSC0003DMT400084227 | Potato | nucleus | 23.21 | 23.13 |
| TraesCS4D01G178400.1 | Wheat | nucleus | 16.04 | 22.82 |
| PGSC0003DMT400046351 | Potato | nucleus | 23.21 | 22.59 |
| Solyc05g050300.1.1 | Tomato | nucleus | 15.02 | 22.56 |
| Solyc05g050340.2.1 | Tomato | nucleus | 24.91 | 22.32 |
| PGSC0003DMT400084214 | Potato | nucleus | 24.57 | 21.75 |
| TraesCS2D01G489700.1 | Wheat | nucleus | 21.5 | 21.5 |
| TraesCS3D01G337000.1 | Wheat | nucleus | 18.43 | 21.18 |
| TraesCS3D01G337100.1 | Wheat | nucleus | 19.11 | 20.97 |
| TraesCS1D01G300700.1 | Wheat | nucleus | 21.5 | 20.79 |
| TraesCS4D01G119700.1 | Wheat | nucleus | 15.02 | 19.82 |
| TraesCS4D01G172200.1 | Wheat | nucleus | 20.14 | 19.73 |
| TraesCS2D01G042700.1 | Wheat | nucleus | 19.11 | 19.11 |
| TraesCS3D01G337400.1 | Wheat | nucleus | 20.82 | 18.94 |
| TraesCS1D01G300500.1 | Wheat | plastid | 19.8 | 18.89 |
| TraesCS2D01G104700.1 | Wheat | nucleus | 22.18 | 18.79 |
| TraesCS2D01G104600.1 | Wheat | nucleus | 21.5 | 18.75 |
| TraesCS1D01G300300.1 | Wheat | nucleus | 19.11 | 18.24 |
| TraesCS6D01G074200.1 | Wheat | nucleus | 22.87 | 17.18 |
| TraesCS1D01G300900.1 | Wheat | nucleus | 16.72 | 16.9 |
| TraesCS2D01G104500.1 | Wheat | nucleus | 20.14 | 16.81 |
| TraesCS1D01G300600.1 | Wheat | nucleus | 16.38 | 16.72 |
| TraesCS1D01G300400.1 | Wheat | nucleus | 15.7 | 16.03 |
| CDX80415 | Canola | nucleus | 7.85 | 15.54 |
| TraesCS2D01G497600.1 | Wheat | nucleus | 18.43 | 14.92 |
| TraesCS3D01G337300.1 | Wheat | nucleus | 18.09 | 14.13 |
| TraesCS2D01G497700.1 | Wheat | nucleus | 17.06 | 13.85 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR32096 | PANTHER:PTHR32096:SF26 | SMART:SM00774 | SUPFAM:SSF118290 | EnsemblPlantsGene:TraesCS2D01G168600 | EnsemblPlants:TraesCS2D01G168600.1 |
| InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr2D:-:112549738..112550733
Molecular Weight (calculated)
31261.5 Da
IEP (calculated)
6.899
GRAVY (calculated)
-0.383
Length
293 amino acids
Sequence
(BLAST)
(BLAST)
001: MESVEGNGTG RGNLQLVVSE LCRVQELVRQ LELHLHAPDA SIDLCRALTA EIFALTDRSI GFVAAAHFPD APTTPSSTSS SLSGVSDQPF RTNTKKRKAT
101: ARWTSQVRVS AAGGAEGPGD DGHSWRKYGQ KDILGAKHPR AYYRCTHRNS QACPATKQVQ RADQDPALFD VVYHGQHTCR PTGGRRPPTN QHNPHAESLL
201: QSLRAGLTVD AEHGALNNTS VSPPSMASPV ASGSNGGLAM SPYPVPAGAY AEWPLDGDLQ EVVSALTAVS APSMDCLFEF DPTFGVGVPN FFM
101: ARWTSQVRVS AAGGAEGPGD DGHSWRKYGQ KDILGAKHPR AYYRCTHRNS QACPATKQVQ RADQDPALFD VVYHGQHTCR PTGGRRPPTN QHNPHAESLL
201: QSLRAGLTVD AEHGALNNTS VSPPSMASPV ASGSNGGLAM SPYPVPAGAY AEWPLDGDLQ EVVSALTAVS APSMDCLFEF DPTFGVGVPN FFM
001: MEMMNWERRS LLNELIHGLK AAKQLQGSSS PSLSASSSYL TTEIKENLLH NIVSSFKKAI LMLNGSTTQH NPTIELAPDP LAHPGKVPGS PASITGNPRS
101: EEFFNVRSKE FNLSSKKRKM LPKWTEQVRI SPERGLEGPH DDIFSWRKYG QKDILGAKFP RSYYRCTFRN TQYCWATKQV QRSDGDPTIF EVTYRGTHTC
201: SQGIPLPEKR ETKPKHTVAV NYQNLRASLT VRTGGLGSEA FSFPVTSPLY TYESINGGGT FYHHVGSSGP SDFTGLISTN TSTGSSPIFD VNFQFDPTAE
301: INTGFPTFFH NSI
101: EEFFNVRSKE FNLSSKKRKM LPKWTEQVRI SPERGLEGPH DDIFSWRKYG QKDILGAKFP RSYYRCTFRN TQYCWATKQV QRSDGDPTIF EVTYRGTHTC
201: SQGIPLPEKR ETKPKHTVAV NYQNLRASLT VRTGGLGSEA FSFPVTSPLY TYESINGGGT FYHHVGSSGP SDFTGLISTN TSTGSSPIFD VNFQFDPTAE
301: INTGFPTFFH NSI
Arabidopsis Description
WRKY41Probable WRKY transcription factor 41 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0Y8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.