Factsheet for TraesCS4A01G087700.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G184500.1
TraesCS1A01G410500.1
TraesCS1A01G410600.1
TraesCS1A01G410700.1
TraesCS1B01G192600.3
TraesCS1B01G440300.1
TraesCS1B01G440500.1
TraesCS1B01G440600.1
TraesCS1B01G440700.1
TraesCS1D01G192200.1
TraesCS1D01G418000.1
TraesCS1D01G418400.1
TraesCS1D01G418500.1
TraesCS1D01G418600.1
TraesCS2A01G161500.1
TraesCS2B01G187500.1
TraesCS2D01G168600.1
TraesCS3D01G238300.1
TraesCS5A01G185600.1
TraesCS5A01G185700.1
TraesCS5B01G183700.1
TraesCS5B01G183800.1
TraesCS5D01G190700.1
TraesCS5D01G190800.1
TraesCS7A01G116000.1
TraesCS7B01G012600.1
TraesCS7D01G110600.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G08480.1	TraesCS1A01G184500.1	AT4G01370.1	22643122
AT4G08480.1	TraesCS1B01G192600.3	AT4G01370.1	22643122
AT4G08480.1	TraesCS1D01G192200.1	AT4G01370.1	22643122
AT4G08500.1	TraesCS1A01G410500.1	AT4G23810.1	17587183
AT4G08500.1	TraesCS1A01G410600.1	AT4G23810.1	17587183
AT4G08500.1	TraesCS1A01G410700.1	AT4G23810.1	17587183
AT4G08500.1	TraesCS1B01G440300.1	AT4G23810.1	17587183
AT4G08500.1	TraesCS1B01G440500.1	AT4G23810.1	17587183
AT4G08500.1	TraesCS1B01G440600.1	AT4G23810.1	17587183
AT4G08500.1	TraesCS1B01G440700.1	AT4G23810.1	17587183
AT4G08500.1	TraesCS1D01G418000.1	AT4G23810.1	17587183
AT4G08500.1	TraesCS1D01G418400.1	AT4G23810.1	17587183
AT4G08500.1	TraesCS1D01G418500.1	AT4G23810.1	17587183
AT4G08500.1	TraesCS1D01G418600.1	AT4G23810.1	17587183
AT4G08500.1	TraesCS2A01G161500.1	AT4G23810.1	17587183
AT4G08500.1	TraesCS2B01G187500.1	AT4G23810.1	17587183
AT4G08500.1	TraesCS2D01G168600.1	AT4G23810.1	17587183
AT4G08500.1	TraesCS3D01G238300.1	AT4G23810.1	17587183
AT4G08500.1	TraesCS5A01G185600.1	AT4G23810.1	17587183
AT4G08500.1	TraesCS5A01G185700.1	AT4G23810.1	17587183
AT4G08500.1	TraesCS5B01G183700.1	AT4G23810.1	17587183
AT4G08500.1	TraesCS5B01G183800.1	AT4G23810.1	17587183
AT4G08500.1	TraesCS5D01G190700.1	AT4G23810.1	17587183
AT4G08500.1	TraesCS5D01G190800.1	AT4G23810.1	17587183
AT4G08500.1	TraesCS7A01G116000.1	AT4G23810.1	17587183
AT4G08500.1	TraesCS7B01G012600.1	AT4G23810.1	17587183
AT4G08500.1	TraesCS7D01G110600.1	AT4G23810.1	17587183

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G217000.1	Wheat	plastid	96.83	97.97
TraesCS4B01G216700.1	Wheat	cytosol, plastid	96.66	97.97
HORVU4Hr1G061550.1	Barley	cytosol, plastid	95.83	83.07
Os03t0262200-00	Rice	cytosol, plastid	74.96	75.21
EER92515	Sorghum	cytosol, plastid	75.29	74.67
Zm00001d028514_P002	Maize	plastid	72.79	66.77
PGSC0003DMT400067237	Potato	cytosol	31.55	64.95
Zm00001d047875_P003	Maize	plastid	69.45	64.7
Bra039693.1-P	Field mustard	cytosol	28.88	63.14
GSMUA_Achr10P...	Banana	cytosol	52.25	59.62
GSMUA_Achr11P...	Banana	cytosol	53.09	58.35
VIT_12s0142g00700.t01	Wine grape	cytosol	25.04	56.82
CDY18020	Canola	cytosol	7.35	56.41
KRH10459	Soybean	cytosol	41.07	55.91
GSMUA_Achr7P11850_001	Banana	mitochondrion, nucleus	51.25	55.42
GSMUA_Achr1P12210_001	Banana	mitochondrion	53.42	55.36
GSMUA_Achr2P07690_001	Banana	nucleus	53.59	55.34
CDY36607	Canola	cytosol	30.38	55.32
CDY24072	Canola	cytosol	32.39	54.49
VIT_12s0034g00750.t01	Wine grape	cytosol	26.88	51.44
TraesCS4A01G272500.1	Wheat	plastid	55.59	50.45
TraesCS6A01G327500.1	Wheat	mitochondrion	34.72	49.76
VIT_12s0034g00240.t01	Wine grape	nucleus	34.56	49.05
KRH42244	Soybean	cytosol	38.23	48.72
KRH53173	Soybean	nucleus	44.57	48.11
VIT_18s0001g03960.t01	Wine grape	mitochondrion, nucleus	44.91	47.44
KRH58364	Soybean	cytosol, plastid	39.57	47.4
KRH18819	Soybean	nucleus	46.58	46.97
KRH16614	Soybean	mitochondrion	43.24	46.84
KRH64744	Soybean	nucleus	44.24	46.82
KRH16616	Soybean	nucleus	46.08	46.78
Bra000647.1-P	Field mustard	cytosol	42.07	46.58
CDY69517	Canola	cytosol	42.24	46.08
CDY34000	Canola	cytosol	42.24	46.0
CDY36198	Canola	cytosol	43.41	45.22
Solyc07g053170.2.1	Tomato	cytosol	44.07	43.93
Bra037860.1-P	Field mustard	cytosol	43.41	43.41
CDX75154	Canola	cytosol	43.57	43.14
AT4G08500.1	Thale cress	cytosol, mitochondrion	43.24	42.6
KXG20217	Sorghum	cytosol	45.24	41.5
TraesCS3A01G016500.1	Wheat	cytosol	9.52	41.01
KRH10458	Soybean	cytosol	31.22	39.62
PGSC0003DMT400061014	Potato	mitochondrion	43.57	39.19
Solyc01g104530.2.1	Tomato	nucleus	42.9	38.65
AT4G08470.1	Thale cress	cytosol	33.56	35.89
CDY18021	Canola	nucleus	21.37	31.22
AT4G08480.1	Thale cress	cytosol, plastid	39.23	30.4
TraesCS1A01G117800.1	Wheat	plastid	15.36	27.46
TraesCS5A01G401400.1	Wheat	cytosol	23.71	21.95
TraesCS4A01G211600.1	Wheat	cytosol	24.04	21.75
TraesCS2A01G264600.1	Wheat	mitochondrion	25.04	20.55
TraesCS3A01G256200.1	Wheat	plastid	15.69	20.17
TraesCS3A01G255700.1	Wheat	mitochondrion	15.19	19.65
TraesCS2A01G307100.1	Wheat	mitochondrion	22.2	19.36
TraesCS2A01G407600.1	Wheat	cytosol	26.71	19.35
TraesCS1A01G367100.1	Wheat	mitochondrion	14.19	19.23
TraesCS3A01G255600.1	Wheat	mitochondrion	14.86	19.22
TraesCS5A01G200800.1	Wheat	cytosol	21.87	19.21
TraesCS3A01G256300.1	Wheat	mitochondrion	15.36	19.13
TraesCS1A01G367200.1	Wheat	mitochondrion	14.36	18.82
TraesCS1A01G367000.1	Wheat	mitochondrion, plastid, vacuole	14.19	18.72
TraesCS6A01G245000.3	Wheat	cytosol	26.88	18.34
TraesCS4A01G110300.1	Wheat	plasma membrane	15.53	17.06
TraesCS7A01G336200.1	Wheat	plastid	13.36	17.06
TraesCS1A01G366900.1	Wheat	cytosol	13.86	15.51
TraesCS2A01G498000.3	Wheat	cytosol	18.86	8.54

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.2.2	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24361
PANTHER:PTHR24361:SF404	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
EnsemblPlantsGene:TraesCS4A01G087700	EnsemblPlants:TraesCS4A01G087700.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr4A:-:92217338..92220835

Molecular Weight (calculated)

65089.2 Da

IEP (calculated)

5.890

GRAVY (calculated)

-0.500

Length

599 amino acids

Sequence
(BLAST)

001: MGRPSQDTAT STSPSGSCRS SKRGGPRLDR RNASKNIGYE YDPAKLFCSY PPSPPRASSA SASGSAAPSL ASSSACSVDL SSFRIGGSGD GGGDVQLLCR
101: NLGLSGPEDF AISLTDWEAH KAFRSSASSS ASSSPSARSQ PDRPVRESPL RHEAAEEPAL PEAADFELPA KETARDVPVE APVRPAWLDP PEPARPDVKK
201: PGCEGGIKGV RPPPVMLKPP PSMALPPAAQ VGSTWDLLLS FAPEEQGQPQ AIRSVPDFGD PDAEDDEDAA EVLTLEDLRL GESSEEFTGT SSISTTNDDE
301: TTESMFYISP NGRFKKKIRS WSRGVLLGSG SFGTVYEGIS DEGVFFAVKE VSLHDQGSNA QQCIFQLEQE IALLSQFEHE NIVHYFGTDK EDSKLYIFLE
401: LVTQGSLVSL YQKYRLRDTH VSAYTRQILN GLNYLHERNI VHRDIKCANI LVHANGSVKL ADFGLAKQTS KLNVLKSCKG TVYWMAPEVV NPKKTYGPAA
501: DIWSLGCTVL EMLTRQLPYP DLEWTQALYR IGKGEPPAIP SGLSKEARDF ISQCVKPNPE DRPSAAKLLD HPFVNRSMRS IRSMRTYTRP NSSTRGTSG

Best Arabidopsis Sequence Match ( AT4G08500.1 )
(BLAST)

001: MDRILARMKK STGRRGGDKN ITPVRRLERR DAARNINYDA ASCSSSSAED LSVSTSSLMT RSLEFPEPTS FRIGGGVGEM DRIYRSLGVS GPDDLAISFD
101: AWEACKKRSS SDVVNRFKSF DLDKVRDQDL SEEGPSGVVV GSDSMNHKVQ GQDLSEAGPS GGIVTELSEI GNLITPVDRL VADGVVENRR VMERTPTIVK
201: SKGYLVPNNV VAVGVGVGGG IKGLRPPVLK PPPAMKRPPI DHRGSSWDFL THFAPSETVK RPSSSSSSSE DGCDEEEGKE EEAEAEEMGA RFIQLGDTAD
301: ETCSFTTNEG DSSSTVSNTS PIYPDGGAII TSWQKGQLLG RGSFGSVYEG ISGDGDFFAV KEVSLLDQGS QAQECIQQLE GEIKLLSQLQ HQNIVRYRGT
401: AKDGSNLYIF LELVTQGSLL KLYQRYQLRD SVVSLYTRQI LDGLKYLHDK GFIHRDIKCA NILVDANGAV KLADFGLAKV SKFNDIKSCK GTPFWMAPEV
501: INRKDSDGYG SPADIWSLGC TVLEMCTGQI PYSDLEPVQA LFRIGRGTLP EVPDTLSLDA RLFILKCLKV NPEERPTAAE LLNHPFVRRP LPSVGSGGSG
601: SASPLLRR

Arabidopsis Description

MEKK1Mitogen-activated protein kinase kinase kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q39008]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.