Factsheet for GSMUA_Achr1P12210_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 3
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr1P27980_001
GSMUA_Achr3P15840_001
GSMUA_Achr3P25080_001
GSMUA_Achr4P15640_001
GSMUA_Achr6P05710_001
GSMUA_Achr7P14140_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G08500.1	GSMUA_Achr10P...	AT4G23810.1	17587183
AT4G08500.1	GSMUA_Achr1P27980_001	AT4G23810.1	17587183
AT4G08500.1	GSMUA_Achr3P15840_001	AT4G23810.1	17587183
AT4G08500.1	GSMUA_Achr3P25080_001	AT4G23810.1	17587183
AT4G08500.1	GSMUA_Achr4P15640_001	AT4G23810.1	17587183
AT4G08500.1	GSMUA_Achr6P05710_001	AT4G23810.1	17587183
AT4G08500.1	GSMUA_Achr7P14140_001	AT4G23810.1	17587183
AT4G08500.1	GSMUA_AchrUn_...	AT4G23810.1	17587183

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol	67.65	71.74
OQU91136	Sorghum	cytosol	45.33	70.62
GSMUA_Achr2P07690_001	Banana	nucleus	69.55	69.31
GSMUA_Achr10P...	Banana	cytosol	58.65	64.57
PGSC0003DMT400067237	Potato	cytosol	32.35	64.26
Bra039693.1-P	Field mustard	cytosol	29.41	62.04
GSMUA_Achr7P11850_001	Banana	mitochondrion, nucleus	58.65	61.19
VIT_12s0142g00700.t01	Wine grape	cytosol	26.64	58.33
Zm00001d033655_P003	Maize	nucleus, plastid	61.07	58.06
Zm00001d013477_P008	Maize	plastid	61.25	57.75
CDY36607	Canola	cytosol	32.18	56.53
Os03t0703400-01	Rice	plasma membrane	62.28	55.05
TraesCS4D01G038900.1	Wheat	plastid	60.9	54.83
CDY24072	Canola	cytosol	33.74	54.78
TraesCS4B01G216700.1	Wheat	cytosol, plastid	55.71	54.48
TraesCS4D01G217000.1	Wheat	plastid	55.71	54.39
HORVU4Hr1G006660.1	Barley	plastid	62.28	54.38
KRH10459	Soybean	cytosol	41.35	54.32
TraesCS4A01G272500.1	Wheat	plastid	61.76	54.09
Os03t0262200-00	Rice	cytosol, plastid	55.71	53.94
TraesCS4B01G041600.1	Wheat	plastid	61.94	53.75
EER92515	Sorghum	cytosol, plastid	56.06	53.64
TraesCS4A01G087700.1	Wheat	cytosol, plastid	55.36	53.42
VIT_12s0034g00750.t01	Wine grape	cytosol	28.2	52.08
CDY18020	Canola	cytosol	6.92	51.28
KRH53173	Soybean	nucleus	47.4	49.37
KRH42244	Soybean	cytosol	39.79	48.94
VIT_18s0001g03960.t01	Wine grape	mitochondrion, nucleus	47.92	48.85
KRH64744	Soybean	nucleus	47.75	48.76
VIT_12s0034g00240.t01	Wine grape	nucleus	35.12	48.1
GSMUA_Achr10P...	Banana	cytosol	46.89	47.96
Zm00001d028514_P002	Maize	plastid	54.15	47.93
Zm00001d047875_P003	Maize	plastid	53.29	47.9
KRH16614	Soybean	mitochondrion	45.5	47.56
KRH16616	Soybean	nucleus	47.92	46.95
KRH18819	Soybean	nucleus	47.92	46.63
KRH58364	Soybean	cytosol, plastid	40.31	46.6
HORVU4Hr1G061550.1	Barley	cytosol, plastid	55.54	46.45
Bra000647.1-P	Field mustard	cytosol	42.73	45.66
CDY69517	Canola	cytosol	42.73	44.99
CDY34000	Canola	cytosol	42.56	44.73
CDY36198	Canola	cytosol	43.77	44.0
Solyc07g053170.2.1	Tomato	cytosol	45.5	43.76
Bra037860.1-P	Field mustard	cytosol	43.77	42.24
AT4G08500.1	Thale cress	cytosol, mitochondrion	43.77	41.61
CDX75154	Canola	cytosol	43.25	41.32
KXG20217	Sorghum	cytosol	45.16	39.97
KRH10458	Soybean	cytosol	32.35	39.62
PGSC0003DMT400061014	Potato	mitochondrion	44.12	38.29
Solyc01g104530.2.1	Tomato	nucleus	43.94	38.2
AT4G08470.1	Thale cress	cytosol	33.74	34.82
GSMUA_Achr10P...	Banana	mitochondrion	21.45	33.42
GSMUA_Achr7P08260_001	Banana	cytosol	20.76	31.25
CDY18021	Canola	nucleus	21.63	30.49
AT4G08480.1	Thale cress	cytosol, plastid	40.48	30.27
GSMUA_Achr6P22370_001	Banana	cytosol	7.09	27.89
GSMUA_Achr4P23230_001	Banana	mitochondrion	24.39	26.6
GSMUA_Achr6P25760_001	Banana	cytosol	21.97	23.78
GSMUA_Achr4P13360_001	Banana	mitochondrion	16.78	23.49
GSMUA_Achr9P21940_001	Banana	cytosol, mitochondrion, peroxisome, plastid	15.74	22.92
GSMUA_Achr10P...	Banana	mitochondrion	15.22	21.89
GSMUA_Achr7P00640_001	Banana	plastid	25.61	21.2
GSMUA_Achr3P18900_001	Banana	mitochondrion	12.8	21.14
GSMUA_Achr9P08460_001	Banana	cytosol, plasma membrane, plastid	19.38	21.05
GSMUA_Achr6P17050_001	Banana	cytosol, mitochondrion	15.05	21.01
GSMUA_Achr6P07600_001	Banana	mitochondrion	15.22	20.71
GSMUA_Achr5P28170_001	Banana	mitochondrion, plastid	15.22	20.71
GSMUA_Achr7P15610_001	Banana	cytosol	15.4	20.37
GSMUA_Achr4P13370_001	Banana	cytosol	16.61	20.3
GSMUA_Achr3P28860_001	Banana	mitochondrion	15.92	20.26
GSMUA_Achr11P...	Banana	mitochondrion, plastid	14.71	20.24
GSMUA_Achr6P13600_001	Banana	mitochondrion	14.71	19.81
GSMUA_Achr2P17150_001	Banana	plastid	25.09	19.49
GSMUA_Achr9P04470_001	Banana	extracellular, nucleus, plastid	16.95	19.25
GSMUA_Achr6P17610_001	Banana	nucleus	24.05	18.51
GSMUA_Achr6P07590_001	Banana	mitochondrion	15.05	17.23
GSMUA_Achr4P25300_001	Banana	cytosol	26.3	17.19
GSMUA_Achr2P05360_001	Banana	cytosol, mitochondrion, nucleus	19.03	17.16
GSMUA_Achr5P19460_001	Banana	nucleus	27.16	17.05
GSMUA_Achr9P19130_001	Banana	nucleus	18.69	16.88
GSMUA_Achr8P21200_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	15.4	14.31
GSMUA_Achr6P22360_001	Banana	plasma membrane, vacuole	11.25	14.22
GSMUA_Achr11P...	Banana	cytosol	20.07	8.69
GSMUA_Achr6P22350_001	Banana	plasma membrane	1.21	0.81

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.2.2	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr1G12210_001
EnsemblPlants:GSMUA_Achr1P12210_001	EnsemblPlants:GSMUA_Achr1T12210_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0RZ79	PFAM:PF00069
PIRSF:PIRSF000615	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24361	PANTHER:PTHR24361:SF404
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002949D2D
SEG:seg	:	:	:	:	:

Description

Putative Mitogen-activated protein kinase kinase kinase 1 [Source:GMGC_GENE;Acc:GSMUA_Achr1G12210_001]

Coordinates

chr1:+:9315034..9325474

Molecular Weight (calculated)

63929.1 Da

IEP (calculated)

4.947

GRAVY (calculated)

-0.439

Length

578 amino acids

Sequence
(BLAST)

001: MFFNRRRAAS SSGRGTMDSS KQQQVTGRRP QLVRRNAVKY VEYEVAGSSS TSFSSAATEE NPDLRAARPL DLFSSAYAQQ TSFRIDGSIE GEVDILCRSL
101: GLNSPEDFAI SEDEWERHKA RLSSDVLSRS RLLQLDSPTH KDPAFASEDP ILVETGVVGG QSCVSPSSGG GGGIRGVRPP VLSPPPPMTK FSSPSLRHEP
201: YSSSSTLQPA PLISLAVTDA ANLTSDIVRT VAPEESDLEA RGKKSVDSEE NKGKGEILVG DEVSEEELRE LWLQDTPEDF TGTSSYSTMN DDESCSTTTE
301: TTFTISPNGW LKRKIKSWMR GMLLGSGSYG MVYEGISDEG IFFAVKEVSL LDQGSNAEQC IIQLEQEIAL LSQFEHENIV QYYGTDKEDS KLYIFLELVT
401: QGSLSSLYQK YRLQDSQVSA YTRQILNGLN YLHERNIVHR DIKCANILVH ADGSVKLADF GLAKEMTKVT LLKSCKGSVY WMAPEVINPR RSYGPAADIW
501: SLGCTVLEML TRQIPYPNLE WTQALYRIGH GEQPSIPSYL SKDARDFISQ CVKVNPDDRP TASQLLEHPF VRRSMGTS

Best Arabidopsis Sequence Match ( AT4G08500.1 )
(BLAST)

001: MDRILARMKK STGRRGGDKN ITPVRRLERR DAARNINYDA ASCSSSSAED LSVSTSSLMT RSLEFPEPTS FRIGGGVGEM DRIYRSLGVS GPDDLAISFD
101: AWEACKKRSS SDVVNRFKSF DLDKVRDQDL SEEGPSGVVV GSDSMNHKVQ GQDLSEAGPS GGIVTELSEI GNLITPVDRL VADGVVENRR VMERTPTIVK
201: SKGYLVPNNV VAVGVGVGGG IKGLRPPVLK PPPAMKRPPI DHRGSSWDFL THFAPSETVK RPSSSSSSSE DGCDEEEGKE EEAEAEEMGA RFIQLGDTAD
301: ETCSFTTNEG DSSSTVSNTS PIYPDGGAII TSWQKGQLLG RGSFGSVYEG ISGDGDFFAV KEVSLLDQGS QAQECIQQLE GEIKLLSQLQ HQNIVRYRGT
401: AKDGSNLYIF LELVTQGSLL KLYQRYQLRD SVVSLYTRQI LDGLKYLHDK GFIHRDIKCA NILVDANGAV KLADFGLAKV SKFNDIKSCK GTPFWMAPEV
501: INRKDSDGYG SPADIWSLGC TVLEMCTGQI PYSDLEPVQA LFRIGRGTLP EVPDTLSLDA RLFILKCLKV NPEERPTAAE LLNHPFVRRP LPSVGSGGSG
601: SASPLLRR

Arabidopsis Description

MEKK1Mitogen-activated protein kinase kinase kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q39008]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.