Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P27980_001 | Banana | nucleus | 60.68 | 57.74 |
| GSMUA_Achr3P15840_001 | Banana | nucleus | 40.0 | 47.39 |
| GSMUA_Achr3P25080_001 | Banana | nucleus | 40.68 | 36.14 |
| GSMUA_Achr7P14140_001 | Banana | nucleus | 42.71 | 35.0 |
| VIT_15s0046g01140.t01 | Wine grape | nucleus | 38.31 | 34.98 |
| VIT_02s0025g01280.t01 | Wine grape | nucleus | 36.27 | 31.29 |
| Bra019265.1-P | Field mustard | nucleus | 33.9 | 30.96 |
| GSMUA_Achr6P05710_001 | Banana | nucleus | 35.59 | 30.88 |
| AT4G11070.1 | Thale cress | nucleus | 32.54 | 30.67 |
| Solyc05g050310.1.1 | Tomato | cytosol, nucleus | 6.1 | 30.51 |
| KRH53440 | Soybean | nucleus | 37.63 | 30.49 |
| KRH64503 | Soybean | nucleus | 37.63 | 30.49 |
| CDX94221 | Canola | nucleus | 32.88 | 30.22 |
| CDY10969 | Canola | nucleus | 32.88 | 30.03 |
| CDY03518 | Canola | nucleus | 31.86 | 29.84 |
| Bra013732.1-P | Field mustard | nucleus | 31.86 | 29.75 |
| CDY47621 | Canola | nucleus | 31.86 | 29.75 |
| KRH77637 | Soybean | nucleus | 32.2 | 29.5 |
| AT4G23810.1 | Thale cress | nucleus | 32.2 | 29.32 |
| VIT_16s0050g02510.t01 | Wine grape | nucleus | 35.93 | 29.12 |
| KRH68901 | Soybean | nucleus | 35.59 | 29.01 |
| KRH41300 | Soybean | nucleus | 34.92 | 28.69 |
| Solyc10g009550.2.1 | Tomato | nucleus | 28.14 | 28.62 |
| PGSC0003DMT400000599 | Potato | nucleus | 33.56 | 28.61 |
| KRH47935 | Soybean | nucleus | 35.25 | 28.18 |
| KRG97154 | Soybean | nucleus | 34.58 | 28.18 |
| Solyc01g095630.2.1 | Tomato | nucleus | 31.86 | 27.98 |
| KRH06499 | Soybean | nucleus | 35.25 | 27.88 |
| CDY65042 | Canola | nucleus | 31.19 | 27.88 |
| CDY25271 | Canola | nucleus | 30.85 | 27.49 |
| Bra033158.1-P | Field mustard | nucleus | 30.85 | 27.49 |
| KRH60029 | Soybean | nucleus | 33.56 | 27.27 |
| Bra026467.1-P | Field mustard | nucleus | 28.81 | 27.24 |
| PGSC0003DMT400051194 | Potato | nucleus | 26.78 | 27.24 |
| PGSC0003DMT400014949 | Potato | nucleus | 33.22 | 27.22 |
| Solyc08g082110.2.1 | Tomato | nucleus | 31.19 | 27.14 |
| CDX87141 | Canola | nucleus | 28.47 | 26.92 |
| GSMUA_Achr4P15640_001 | Banana | nucleus | 31.53 | 26.65 |
| CDY42043 | Canola | nucleus | 26.44 | 26.62 |
| CDY19847 | Canola | nucleus | 28.14 | 26.6 |
| Solyc08g008280.2.1 | Tomato | nucleus | 32.2 | 26.39 |
| CDX80015 | Canola | nucleus | 26.44 | 26.35 |
| Bra004540.1-P | Field mustard | nucleus | 25.42 | 26.32 |
| PGSC0003DMT400031695 | Potato | nucleus | 30.17 | 26.25 |
| CDX80414 | Canola | nucleus | 27.8 | 26.2 |
| GSMUA_Achr10P... | Banana | extracellular, nucleus | 27.12 | 25.81 |
| AT2G46400.1 | Thale cress | nucleus | 25.76 | 25.76 |
| AT5G24110.1 | Thale cress | nucleus | 26.44 | 25.74 |
| Bra000423.1-P | Field mustard | nucleus | 24.41 | 25.62 |
| CDX83367 | Canola | nucleus | 24.07 | 25.54 |
| Solyc03g007380.1.1 | Tomato | nucleus | 30.51 | 25.5 |
| PGSC0003DMT400023502 | Potato | nucleus | 30.51 | 25.28 |
| CDX89127 | Canola | nucleus | 23.73 | 25.27 |
| Bra014426.1-P | Field mustard | nucleus | 23.73 | 25.27 |
| CDX95699 | Canola | nucleus | 24.41 | 25.26 |
| CDX88077 | Canola | nucleus | 26.44 | 24.92 |
| Bra009734.1-P | Field mustard | nucleus | 26.44 | 24.92 |
| GSMUA_Achr9P04830_001 | Banana | nucleus | 15.25 | 24.73 |
| Solyc05g050330.2.1 | Tomato | nucleus | 20.0 | 24.18 |
| PGSC0003DMT400046351 | Potato | nucleus | 24.07 | 23.59 |
| Zm00001d036244_P001 | Maize | nucleus | 29.15 | 23.5 |
| EER87882 | Sorghum | nucleus | 29.49 | 23.02 |
| Zm00001d045283_P001 | Maize | nucleus | 30.85 | 22.98 |
| TraesCS7D01G110600.1 | Wheat | nucleus | 28.47 | 22.83 |
| Solyc05g050300.1.1 | Tomato | nucleus | 14.92 | 22.56 |
| TraesCS7A01G116000.1 | Wheat | nucleus | 28.81 | 22.55 |
| TraesCS7B01G012600.1 | Wheat | nucleus | 28.14 | 22.37 |
| PGSC0003DMT400084227 | Potato | nucleus | 22.03 | 22.11 |
| GSMUA_Achr5P07490_001 | Banana | endoplasmic reticulum | 24.41 | 21.49 |
| Os06t0158100-00 | Rice | nucleus | 27.8 | 20.97 |
| PGSC0003DMT400084214 | Potato | nucleus | 23.39 | 20.85 |
| GSMUA_Achr8P25110_001 | Banana | nucleus | 15.59 | 20.72 |
| GSMUA_Achr7P22020_001 | Banana | extracellular, nucleus | 15.93 | 20.7 |
| Solyc05g050340.2.1 | Tomato | nucleus | 22.71 | 20.49 |
| GSMUA_Achr6P32460_001 | Banana | nucleus | 22.37 | 20.25 |
| GSMUA_Achr8P01730_001 | Banana | nucleus | 21.02 | 20.2 |
| GSMUA_Achr5P08580_001 | Banana | nucleus | 19.32 | 18.63 |
| GSMUA_Achr6P25120_001 | Banana | nucleus | 13.56 | 18.02 |
| CDX80415 | Canola | nucleus | 8.47 | 16.89 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSMUA_AchrUn_randomG24820_001 | EnsemblPlants:GSMUA_AchrUn_randomP24820_001 | EnsemblPlants:GSMUA_AchrUn_randomT24820_001 | InterPro:IPR003657 | InterPro:IPR036576 |
| UniProt:M0UC40 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR32096 | PANTHER:PTHR32096:SF20 | SMART:SM00774 |
| SUPFAM:SSF118290 | UniParc:UPI000294B6C1 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : |
Description
Putative Probable WRKY transcription factor 41 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG24820_001]
Coordinates
chrchrUn_random:-:123515726..123519761
Molecular Weight (calculated)
31988.7 Da
IEP (calculated)
6.981
GRAVY (calculated)
-0.492
Length
295 amino acids
Sequence
(BLAST)
(BLAST)
001: MQNDGTGSEL RSTLMAELAR ALQLVSQLQS HLDHPSAAEL CKSLATEILS SIGKSILMAK SGDPDGDLQA GNSPRSENSS PAFRDPGRRD FMKKKKTMHK
101: LTNQVRLIPG VGGVEGPVDD GYSWRKYGQK DILGAKHPRA YYRCTHRSSQ GCQATKQVQR SGEDPLVFDV TYLGTHTCLQ RPQRAPTSAC LGHQSSYTLE
201: MEGVHCEEEA WGLTSLSYGS MAVMGDTAAD LFSSLSSPPA FSSPYQISSF DGGMKLQTSD SDIAEMISRG DSASNSSLKC MSLQRIISCD NNIIH
101: LTNQVRLIPG VGGVEGPVDD GYSWRKYGQK DILGAKHPRA YYRCTHRSSQ GCQATKQVQR SGEDPLVFDV TYLGTHTCLQ RPQRAPTSAC LGHQSSYTLE
201: MEGVHCEEEA WGLTSLSYGS MAVMGDTAAD LFSSLSSPPA FSSPYQISSF DGGMKLQTSD SDIAEMISRG DSASNSSLKC MSLQRIISCD NNIIH
001: MEMMNWERRS LLNELIHGLK AAKQLQGSSS PSLSASSSYL TTEIKENLLH NIVSSFKKAI LMLNGSTTQH NPTIELAPDP LAHPGKVPGS PASITGNPRS
101: EEFFNVRSKE FNLSSKKRKM LPKWTEQVRI SPERGLEGPH DDIFSWRKYG QKDILGAKFP RSYYRCTFRN TQYCWATKQV QRSDGDPTIF EVTYRGTHTC
201: SQGIPLPEKR ETKPKHTVAV NYQNLRASLT VRTGGLGSEA FSFPVTSPLY TYESINGGGT FYHHVGSSGP SDFTGLISTN TSTGSSPIFD VNFQFDPTAE
301: INTGFPTFFH NSI
101: EEFFNVRSKE FNLSSKKRKM LPKWTEQVRI SPERGLEGPH DDIFSWRKYG QKDILGAKFP RSYYRCTFRN TQYCWATKQV QRSDGDPTIF EVTYRGTHTC
201: SQGIPLPEKR ETKPKHTVAV NYQNLRASLT VRTGGLGSEA FSFPVTSPLY TYESINGGGT FYHHVGSSGP SDFTGLISTN TSTGSSPIFD VNFQFDPTAE
301: INTGFPTFFH NSI
Arabidopsis Description
WRKY41Probable WRKY transcription factor 41 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0Y8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.