Factsheet for GSMUA_Achr8P25110_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P22020_001	Banana	extracellular, nucleus	27.03	26.43
GSMUA_Achr5P08580_001	Banana	nucleus	35.59	25.82
GSMUA_Achr9P04830_001	Banana	nucleus	19.82	24.18
GSMUA_Achr6P25120_001	Banana	nucleus	23.87	23.87
TraesCS3D01G337000.1	Wheat	nucleus	24.32	21.18
TraesCS3B01G375200.1	Wheat	nucleus	24.32	21.18
TraesCS3A01G343000.1	Wheat	nucleus	24.32	20.77
EES01666	Sorghum	nucleus	22.07	20.76
HORVU3Hr1G080860.1	Barley	nucleus	23.42	20.31
Zm00001d043066_P001	Maize	nucleus	21.62	20.0
Os01t0820400-01	Rice	nucleus	22.97	19.25
GSMUA_Achr3P15840_001	Banana	nucleus	20.27	18.07
GSMUA_Achr1P27980_001	Banana	nucleus	22.97	16.45
GSMUA_Achr8P01730_001	Banana	nucleus	22.07	15.96
GSMUA_Achr6P32460_001	Banana	nucleus	23.42	15.95
GSMUA_Achr3P25080_001	Banana	nucleus	23.42	15.66
GSMUA_AchrUn_...	Banana	nucleus	20.72	15.59
GSMUA_Achr5P07490_001	Banana	endoplasmic reticulum	23.42	15.52
Zm00001d012508_P001	Maize	mitochondrion	16.22	15.19
GSMUA_Achr6P05710_001	Banana	nucleus	21.62	14.12
GSMUA_Achr4P15640_001	Banana	nucleus	21.17	13.47
GSMUA_Achr10P...	Banana	extracellular, nucleus	18.47	13.23
GSMUA_Achr7P14140_001	Banana	nucleus	21.17	13.06

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	EnsemblPlantsGene:GSMUA_Achr8G25110_001	EnsemblPlants:GSMUA_Achr8P25110_001	EnsemblPlants:GSMUA_Achr8T25110_001	InterPro:IPR003657	InterPro:IPR036576
UniProt:M0TTG4	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31282	PANTHER:PTHR31282:SF17	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI0002962861	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G25110_001]

Coordinates

chr8:+:29050157..29051408

Molecular Weight (calculated)

25276.1 Da

IEP (calculated)

7.922

GRAVY (calculated)

-0.666

Length

222 amino acids

Sequence
(BLAST)

001: MMKMTRVYIL KLGYIGRGGE KRLSRNPHLK DIQVRCDSKS RRSNGISCDR TCCRRKQETW SIVTSVPYGD GYQWRKYGQK TINNAKYPRS YYRCTYKEGQ
101: GCLAKKTVQQ EDSCADPPSF KVEYSIQHTC KTIDAVVPFV MDSTPKEALI HTGGFSSEQH LSLSSDTGGN LIQDESLWIY DQMQECPPLV PELLGKMDMA
201: SSILSPTGPW DWDMLMGDDD GW

Best Arabidopsis Sequence Match ( AT3G56400.1 )
(BLAST)

001: MDTNKAKKLK VMNQLVEGHD LTTQLQQLLS QPGSGLEDLV AKILVCFNNT ISVLDTFEPI SSSSSLAAVE GSQNASCDND GKFEDSGDSR KRLGPVKGKR
101: GCYKRKKRSE TCTIESTILE DAFSWRKYGQ KEILNAKFPR SYFRCTHKYT QGCKATKQVQ KVELEPKMFS ITYIGNHTCN TNAETPKSKT CDHHDEIFMD
201: SEDHKSPSLS TSMKEEDNPH RHHGSSTEND LSLVWPEMVF EEDYHHQASY VNGKTSTSID VLGSQDLMVF GGGGDFEFSE NEHFSIFSSC SNLS

Arabidopsis Description

WRKY70Probable WRKY transcription factor 70 [Source:UniProtKB/Swiss-Prot;Acc:Q9LY00]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.