Factsheet for GSMUA_Achr7P22020_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, nucleus

Predictor Summary:

nucleus 5
plastid 2
mitochondrion 1
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, nucleus
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES01666	Sorghum	nucleus	33.92	32.63
Zm00001d043066_P001	Maize	nucleus	33.04	31.25
TraesCS3B01G375200.1	Wheat	nucleus	32.16	28.63
TraesCS3A01G343000.1	Wheat	nucleus	32.6	28.46
TraesCS3D01G337000.1	Wheat	nucleus	31.72	28.24
HORVU3Hr1G080860.1	Barley	nucleus	31.28	27.73
GSMUA_Achr8P25110_001	Banana	nucleus	26.43	27.03
Os01t0820400-01	Rice	nucleus	29.52	25.28
Zm00001d012508_P001	Maize	mitochondrion	23.79	22.78
GSMUA_Achr9P04830_001	Banana	nucleus	17.18	21.43
GSMUA_Achr3P15840_001	Banana	nucleus	22.03	20.08
GSMUA_Achr5P08580_001	Banana	nucleus	23.79	17.65
GSMUA_Achr1P27980_001	Banana	nucleus	22.47	16.45
GSMUA_Achr3P25080_001	Banana	nucleus	23.35	15.96
GSMUA_AchrUn_...	Banana	nucleus	20.7	15.93
GSMUA_Achr6P25120_001	Banana	nucleus	15.42	15.77
GSMUA_Achr4P15640_001	Banana	nucleus	24.23	15.76
GSMUA_Achr7P14140_001	Banana	nucleus	24.67	15.56
GSMUA_Achr8P01730_001	Banana	nucleus	20.7	15.31
GSMUA_Achr6P32460_001	Banana	nucleus	21.59	15.03
GSMUA_Achr10P...	Banana	extracellular, nucleus	20.26	14.84
GSMUA_Achr6P05710_001	Banana	nucleus	21.15	14.12
GSMUA_Achr5P07490_001	Banana	endoplasmic reticulum	20.26	13.73

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	EnsemblPlantsGene:GSMUA_Achr7G22020_001	EnsemblPlants:GSMUA_Achr7P22020_001	EnsemblPlants:GSMUA_Achr7T22020_001	InterPro:IPR003657	InterPro:IPR036576
UniProt:M0TJN8	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31282	PANTHER:PTHR31282:SF17	SMART:SM00774
SUPFAM:SSF118290	SignalP:SignalP-noTM	UniParc:UPI000294A441	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr7G22020_001]

Coordinates

chr7:+:24622872..24623703

Molecular Weight (calculated)

25338.4 Da

IEP (calculated)

5.879

GRAVY (calculated)

-0.821

Length

227 amino acids

Sequence
(BLAST)

001: MAKQILQLTT SALSTLQFCG CGASDDGGTG NCSGELSKSS EGRDGPHGRR TSCRRKNKTS TKVKTTVPYE DGYQWRKYGQ KTINDAMYPR CYYKCTYRDD
101: QGCPATKTVQ QQDSYADPPT FMVEYSMKHT CKTPQTIFPV LMVESSPQKA SLHGSDSTGS SDLQDLHLSP PSSVVTHSES HDKCSSSNEQ EQPCQHEGLI
201: TVNTLDELDM ESMDLFMRNF DGWFYVE

Best Arabidopsis Sequence Match ( AT5G01900.1 )
(BLAST)

001: MNSCQQKAME KLLHGHGCAN QLLIMDQTES DSSMEREDLA KSVLHCFSDA LSILIDTNDH QDDQSNNSSP QDSSPVLESS RKPLHKRGRK TSMAESSDYH
101: RHESSTPIYH DGFLWRKYGQ KQIKESEYQR SYYKCAYTKD QNCEAKKQVQ KIQHNPPLYS TTYFGQHICQ LHQAYATFPI DTSDFEEHEG SHMIRFGHPN
201: ISFSSSTSNL RQHQNHQDRI KDEYMKPVIA EDWSPSQWMS SEVALAVEAF EFNPFWTSHD LSS

Arabidopsis Description

WRKY62WRKY62 [Source:UniProtKB/TrEMBL;Acc:A0A178U8T9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.