Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc05g050340.2.1 | Tomato | nucleus | 86.1 | 87.16 |
| PGSC0003DMT400084227 | Potato | nucleus | 67.07 | 75.51 |
| Solyc05g050330.2.1 | Tomato | nucleus | 55.29 | 75.0 |
| Solyc05g050310.1.1 | Tomato | cytosol, nucleus | 12.99 | 72.88 |
| PGSC0003DMT400046351 | Potato | nucleus | 59.52 | 65.45 |
| PGSC0003DMT400051194 | Potato | nucleus | 25.08 | 28.62 |
| Os11t0685700-00 | Rice | nucleus | 15.71 | 27.08 |
| PGSC0003DMT400021625 | Potato | nucleus | 17.52 | 26.61 |
| PGSC0003DMT400070939 | Potato | nucleus | 17.82 | 26.46 |
| GSMUA_Achr3P15840_001 | Banana | nucleus | 18.73 | 24.9 |
| TraesCS2D01G168600.1 | Wheat | nucleus | 21.75 | 24.57 |
| TraesCS2B01G187500.1 | Wheat | nucleus | 21.45 | 24.23 |
| GSMUA_Achr1P27980_001 | Banana | nucleus | 22.66 | 24.19 |
| HORVU2Hr1G029430.2 | Barley | mitochondrion, nucleus | 17.82 | 24.18 |
| TraesCS2A01G161500.1 | Wheat | nucleus | 21.15 | 23.65 |
| Zm00001d020136_P001 | Maize | nucleus | 21.45 | 23.51 |
| GSMUA_AchrUn_... | Banana | nucleus | 20.85 | 23.39 |
| PGSC0003DMT400031695 | Potato | nucleus | 23.87 | 23.3 |
| Zm00001d020137_P001 | Maize | nucleus | 22.36 | 22.84 |
| Os08t0386200-01 | Rice | nucleus | 21.75 | 22.57 |
| TraesCS1B01G440300.1 | Wheat | nucleus | 16.62 | 22.45 |
| HORVU1Hr1G090190.2 | Barley | nucleus | 17.22 | 22.44 |
| TraesCS1D01G418000.1 | Wheat | nucleus | 16.62 | 22.36 |
| TraesCS1D01G418600.1 | Wheat | nucleus | 16.62 | 22.27 |
| Zm00001d005622_P001 | Maize | nucleus | 22.05 | 22.05 |
| TraesCS1B01G440700.1 | Wheat | nucleus | 16.01 | 21.99 |
| GSMUA_Achr3P25080_001 | Banana | nucleus | 22.05 | 21.99 |
| TraesCS1D01G418400.1 | Wheat | nucleus | 16.92 | 21.96 |
| EER96590 | Sorghum | nucleus | 21.75 | 21.95 |
| PGSC0003DMT400014949 | Potato | nucleus | 23.87 | 21.94 |
| EER96589 | Sorghum | nucleus | 20.54 | 21.94 |
| HORVU1Hr1G090130.4 | Barley | nucleus | 17.22 | 21.92 |
| PGSC0003DMT400023502 | Potato | nucleus | 23.57 | 21.91 |
| TraesCS1A01G410700.1 | Wheat | nucleus | 16.31 | 21.86 |
| TraesCS1B01G440600.1 | Wheat | nucleus | 15.71 | 21.85 |
| TraesCS1B01G440500.1 | Wheat | nucleus | 17.22 | 21.84 |
| TraesCS1A01G410500.1 | Wheat | nucleus | 16.62 | 21.74 |
| HORVU3Hr1G059210.1 | Barley | nucleus | 16.01 | 21.72 |
| PGSC0003DMT400000599 | Potato | nucleus | 22.66 | 21.68 |
| Os05t0571200-01 | Rice | nucleus | 18.13 | 21.66 |
| Zm00001d050247_P001 | Maize | nucleus | 20.85 | 21.56 |
| TraesCS1D01G418500.1 | Wheat | nucleus | 15.71 | 21.49 |
| CDX87141 | Canola | nucleus | 20.24 | 21.47 |
| OQU80381 | Sorghum | nucleus | 22.05 | 21.47 |
| HORVU1Hr1G090110.1 | Barley | nucleus | 16.31 | 21.34 |
| Os01t0656400-00 | Rice | nucleus | 17.52 | 21.17 |
| Bra026467.1-P | Field mustard | nucleus | 19.94 | 21.15 |
| AT5G24110.1 | Thale cress | nucleus | 19.34 | 21.12 |
| HORVU5Hr1G034830.3 | Barley | nucleus | 21.15 | 21.08 |
| CDY19847 | Canola | nucleus | 19.64 | 20.83 |
| Os09t0334500-01 | Rice | nucleus | 22.66 | 20.78 |
| CDX80414 | Canola | nucleus | 19.64 | 20.77 |
| Bra009734.1-P | Field mustard | nucleus | 19.64 | 20.77 |
| CDX88077 | Canola | nucleus | 19.64 | 20.77 |
| TraesCS5A01G185600.1 | Wheat | nucleus | 21.45 | 20.7 |
| TraesCS5B01G183700.1 | Wheat | nucleus | 21.15 | 20.65 |
| HORVU1Hr1G090170.1 | Barley | nucleus | 15.41 | 20.65 |
| TraesCS3D01G238300.1 | Wheat | nucleus | 18.13 | 20.62 |
| PGSC0003DMT400053122 | Potato | nucleus | 17.22 | 20.58 |
| TraesCS5D01G190700.1 | Wheat | nucleus | 21.15 | 20.53 |
| TraesCS5B01G183800.1 | Wheat | nucleus | 21.45 | 20.52 |
| Zm00001d032265_P001 | Maize | nucleus | 20.54 | 20.42 |
| GSMUA_Achr4P15640_001 | Banana | nucleus | 21.45 | 20.34 |
| TraesCS5A01G185700.1 | Wheat | nucleus | 21.45 | 20.34 |
| GSMUA_Achr10P... | Banana | extracellular, nucleus | 19.03 | 20.32 |
| GSMUA_Achr6P05710_001 | Banana | nucleus | 20.85 | 20.29 |
| TraesCS5D01G190800.1 | Wheat | nucleus | 21.45 | 20.23 |
| EES18716 | Sorghum | nucleus | 16.62 | 20.22 |
| HORVU3Hr1G059220.1 | Barley | nucleus | 18.73 | 20.13 |
| Zm00001d011496_P002 | Maize | nucleus | 19.64 | 19.88 |
| PGSC0003DMT400075091 | Potato | nucleus | 17.52 | 19.8 |
| GSMUA_Achr7P14140_001 | Banana | nucleus | 21.45 | 19.72 |
| EES03370 | Sorghum | nucleus | 20.54 | 19.65 |
| HORVU0Hr1G012740.1 | Barley | nucleus | 18.73 | 19.2 |
| TraesCS1A01G410600.1 | Wheat | nucleus | 13.29 | 18.88 |
| HORVU5Hr1G056130.2 | Barley | nucleus | 22.05 | 18.62 |
| Zm00001d044010_P001 | Maize | nucleus | 18.43 | 18.21 |
| HORVU3Hr1G058670.1 | Barley | nucleus | 13.6 | 18.07 |
| EER87882 | Sorghum | nucleus | 20.24 | 17.72 |
| PGSC0003DMT400022638 | Potato | nucleus | 18.43 | 17.58 |
| Zm00001d009619_P002 | Maize | nucleus | 15.41 | 17.17 |
| Zm00001d036244_P001 | Maize | nucleus | 18.73 | 16.94 |
| CDX80415 | Canola | nucleus | 7.55 | 16.89 |
| Os06t0158100-00 | Rice | nucleus | 19.34 | 16.37 |
| HORVU0Hr1G012750.1 | Barley | nucleus | 16.31 | 16.27 |
| TraesCS7A01G116000.1 | Wheat | nucleus | 18.43 | 16.18 |
| TraesCS7B01G012600.1 | Wheat | nucleus | 18.13 | 16.17 |
| TraesCS7D01G110600.1 | Wheat | nucleus | 17.52 | 15.76 |
| Zm00001d045283_P001 | Maize | nucleus | 18.73 | 15.66 |
Protein Annotations
| EntrezGene:102606061 | MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | UniProt:M1D7K8 | PFAM:PF03106 |
| EnsemblPlantsGene:PGSC0003DMG401033880 | PGSC:PGSC0003DMG401033880 | EnsemblPlants:PGSC0003DMT400084214 | PFscan:PS50811 | PANTHER:PTHR31282 | PANTHER:PTHR31282:SF26 |
| SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI000294E42A | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | RefSeq:XP_006345566.1 |
| SEG:seg | : | : | : | : | : |
Description
WRKY transcription factor 27 [Source:PGSC_GENE;Acc:PGSC0003DMG401033880]
Coordinates
chr5:+:44663003..44665602
Molecular Weight (calculated)
37368.8 Da
IEP (calculated)
6.116
GRAVY (calculated)
-0.776
Length
331 amino acids
Sequence
(BLAST)
(BLAST)
001: MGENNFWERE IVIAELTKGK ELMLQLQKHF DPMKQLVCQY LAVEILSSYD KAMSLLNGTA LSGMMKSKGK EIIHPAPSSS TAPQLESPHL LADSSTKSCD
101: RPSNYRKRKM LARRKEYVEA RPGEEVPPED GLSWRKYGQK LILGEKYPRE YYRCPRRCCE ATKMVQRIET EPLTFEVTYG GSHSCGQETK NQNEELIAVQ
201: QTKCDEVGRG AGQIFESYIH KMVSTPNNSY NNSSTGVEFS NSNSVFNIPN SDFIPTPTSS PHPDMDFPFD YSSFTHLFGQ DVPDNSGNDS LAALAAEVYK
301: LYEENGKLNF PHRYDKQAEN SRPSNNVGDQ S
101: RPSNYRKRKM LARRKEYVEA RPGEEVPPED GLSWRKYGQK LILGEKYPRE YYRCPRRCCE ATKMVQRIET EPLTFEVTYG GSHSCGQETK NQNEELIAVQ
201: QTKCDEVGRG AGQIFESYIH KMVSTPNNSY NNSSTGVEFS NSNSVFNIPN SDFIPTPTSS PHPDMDFPFD YSSFTHLFGQ DVPDNSGNDS LAALAAEVYK
301: LYEENGKLNF PHRYDKQAEN SRPSNNVGDQ S
001: MEMMNWERRS LLNELIHGLK AAKQLQGSSS PSLSASSSYL TTEIKENLLH NIVSSFKKAI LMLNGSTTQH NPTIELAPDP LAHPGKVPGS PASITGNPRS
101: EEFFNVRSKE FNLSSKKRKM LPKWTEQVRI SPERGLEGPH DDIFSWRKYG QKDILGAKFP RSYYRCTFRN TQYCWATKQV QRSDGDPTIF EVTYRGTHTC
201: SQGIPLPEKR ETKPKHTVAV NYQNLRASLT VRTGGLGSEA FSFPVTSPLY TYESINGGGT FYHHVGSSGP SDFTGLISTN TSTGSSPIFD VNFQFDPTAE
301: INTGFPTFFH NSI
101: EEFFNVRSKE FNLSSKKRKM LPKWTEQVRI SPERGLEGPH DDIFSWRKYG QKDILGAKFP RSYYRCTFRN TQYCWATKQV QRSDGDPTIF EVTYRGTHTC
201: SQGIPLPEKR ETKPKHTVAV NYQNLRASLT VRTGGLGSEA FSFPVTSPLY TYESINGGGT FYHHVGSSGP SDFTGLISTN TSTGSSPIFD VNFQFDPTAE
301: INTGFPTFFH NSI
Arabidopsis Description
WRKY41Probable WRKY transcription factor 41 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0Y8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.