Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G110600.1 | Wheat | nucleus | 92.99 | 93.75 |
| TraesCS7A01G116000.1 | Wheat | nucleus | 91.37 | 89.92 |
| Os06t0158100-00 | Rice | nucleus | 55.8 | 52.94 |
| EER87882 | Sorghum | nucleus | 48.79 | 47.88 |
| Zm00001d045283_P001 | Maize | nucleus | 50.13 | 46.97 |
| Zm00001d036244_P001 | Maize | nucleus | 44.74 | 45.36 |
| VIT_15s0046g01140.t01 | Wine grape | nucleus | 28.57 | 32.82 |
| GSMUA_Achr1P27980_001 | Banana | nucleus | 26.15 | 31.29 |
| CDY03518 | Canola | nucleus | 26.15 | 30.79 |
| TraesCS2B01G187500.1 | Wheat | nucleus | 24.26 | 30.72 |
| AT4G23810.1 | Thale cress | nucleus | 26.68 | 30.56 |
| Bra013732.1-P | Field mustard | nucleus | 25.61 | 30.06 |
| CDX94221 | Canola | nucleus | 25.88 | 29.91 |
| Solyc08g082110.2.1 | Tomato | nucleus | 27.22 | 29.79 |
| CDY47621 | Canola | nucleus | 25.34 | 29.75 |
| Bra019265.1-P | Field mustard | nucleus | 25.88 | 29.72 |
| TraesCS1B01G440600.1 | Wheat | nucleus | 18.87 | 29.41 |
| PGSC0003DMT400031695 | Potato | nucleus | 26.68 | 29.2 |
| VIT_16s0050g02510.t01 | Wine grape | nucleus | 28.57 | 29.12 |
| CDY10969 | Canola | nucleus | 25.34 | 29.1 |
| KRH68901 | Soybean | nucleus | 28.3 | 29.01 |
| KRG97154 | Soybean | nucleus | 28.03 | 28.73 |
| TraesCS1B01G440700.1 | Wheat | nucleus | 18.6 | 28.63 |
| KRH64503 | Soybean | nucleus | 28.03 | 28.57 |
| GSMUA_AchrUn_... | Banana | nucleus | 22.37 | 28.14 |
| PGSC0003DMT400014949 | Potato | nucleus | 27.22 | 28.06 |
| KRH53440 | Soybean | nucleus | 27.49 | 28.02 |
| KRH77637 | Soybean | nucleus | 24.26 | 27.95 |
| VIT_02s0025g01280.t01 | Wine grape | nucleus | 25.61 | 27.78 |
| TraesCS1B01G440300.1 | Wheat | nucleus | 18.33 | 27.76 |
| Solyc10g009550.2.1 | Tomato | nucleus | 21.56 | 27.59 |
| CDY65042 | Canola | nucleus | 24.53 | 27.58 |
| AT4G11070.1 | Thale cress | nucleus | 23.18 | 27.48 |
| PGSC0003DMT400051194 | Potato | nucleus | 21.29 | 27.24 |
| Solyc08g008280.2.1 | Tomato | nucleus | 26.42 | 27.22 |
| CDX88077 | Canola | nucleus | 22.91 | 27.16 |
| Bra009734.1-P | Field mustard | nucleus | 22.91 | 27.16 |
| CDX80414 | Canola | nucleus | 22.91 | 27.16 |
| TraesCS5B01G183700.1 | Wheat | nucleus | 24.8 | 27.14 |
| CDX87141 | Canola | nucleus | 22.64 | 26.92 |
| Bra026467.1-P | Field mustard | nucleus | 22.64 | 26.92 |
| CDY25271 | Canola | nucleus | 23.99 | 26.89 |
| Bra033158.1-P | Field mustard | nucleus | 23.99 | 26.89 |
| AT5G24110.1 | Thale cress | nucleus | 21.83 | 26.73 |
| CDX89127 | Canola | nucleus | 19.68 | 26.35 |
| Bra014426.1-P | Field mustard | nucleus | 19.68 | 26.35 |
| Bra004540.1-P | Field mustard | nucleus | 20.22 | 26.32 |
| CDY19847 | Canola | nucleus | 22.1 | 26.28 |
| TraesCS1B01G440500.1 | Wheat | nucleus | 18.33 | 26.05 |
| CDX80015 | Canola | nucleus | 20.75 | 26.01 |
| CDY42043 | Canola | nucleus | 20.49 | 25.94 |
| AT2G46400.1 | Thale cress | nucleus | 20.49 | 25.76 |
| KRH47935 | Soybean | nucleus | 25.61 | 25.75 |
| KRH60029 | Soybean | nucleus | 25.07 | 25.62 |
| TraesCS5B01G183800.1 | Wheat | nucleus | 23.72 | 25.43 |
| KRH06499 | Soybean | nucleus | 25.34 | 25.2 |
| Solyc05g050300.1.1 | Tomato | nucleus | 13.21 | 25.13 |
| Bra000423.1-P | Field mustard | nucleus | 18.87 | 24.91 |
| TraesCS7B01G249700.1 | Wheat | nucleus | 18.33 | 24.82 |
| KRH41300 | Soybean | nucleus | 23.45 | 24.23 |
| CDX95699 | Canola | nucleus | 18.6 | 24.21 |
| CDX83367 | Canola | nucleus | 18.06 | 24.1 |
| PGSC0003DMT400000599 | Potato | nucleus | 22.37 | 23.99 |
| Solyc03g007380.1.1 | Tomato | nucleus | 22.64 | 23.8 |
| TraesCS3B01G375800.1 | Wheat | nucleus | 17.25 | 23.79 |
| TraesCS3B01G375700.1 | Wheat | nucleus | 17.25 | 23.53 |
| PGSC0003DMT400023502 | Potato | nucleus | 22.37 | 23.31 |
| Solyc01g095630.2.1 | Tomato | nucleus | 21.02 | 23.21 |
| TraesCS2B01G517400.1 | Wheat | nucleus | 18.33 | 22.9 |
| PGSC0003DMT400046351 | Potato | nucleus | 17.79 | 21.93 |
| Solyc05g050330.2.1 | Tomato | nucleus | 14.02 | 21.31 |
| GSMUA_Achr4P15640_001 | Banana | nucleus | 19.95 | 21.2 |
| TraesCS3B01G375200.1 | Wheat | nucleus | 14.56 | 21.18 |
| TraesCS4B01G121500.1 | Wheat | nucleus | 12.67 | 21.17 |
| TraesCS3B01G375300.1 | Wheat | nucleus | 15.09 | 21.13 |
| TraesCS2B01G056300.1 | Wheat | nucleus | 15.9 | 21.0 |
| TraesCS4B01G170100.1 | Wheat | nucleus | 16.98 | 20.86 |
| TraesCS4B01G176700.1 | Wheat | nucleus | 11.32 | 20.39 |
| PGSC0003DMT400084227 | Potato | nucleus | 15.9 | 20.07 |
| TraesCS2B01G056400.1 | Wheat | nucleus, plastid | 15.36 | 19.79 |
| TraesCS3B01G375600.1 | Wheat | nucleus | 16.98 | 19.57 |
| Solyc05g050310.1.1 | Tomato | cytosol, nucleus | 2.96 | 18.64 |
| TraesCS2B01G121800.1 | Wheat | nucleus | 17.25 | 18.44 |
| PGSC0003DMT400084214 | Potato | nucleus | 16.17 | 18.13 |
| Solyc05g050340.2.1 | Tomato | nucleus | 15.36 | 17.43 |
| TraesCS6B01G108000.1 | Wheat | nucleus | 18.06 | 17.09 |
| TraesCS1B01G311000.1 | Wheat | nucleus | 12.67 | 16.32 |
| TraesCS1B01G310900.1 | Wheat | nucleus | 12.4 | 16.08 |
| TraesCS2B01G121900.1 | Wheat | nucleus | 16.44 | 16.05 |
| TraesCS1B01G243100.1 | Wheat | nucleus | 15.36 | 15.88 |
| CDX80415 | Canola | nucleus | 5.12 | 12.84 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR32096 | PANTHER:PTHR32096:SF24 | SMART:SM00774 | SUPFAM:SSF118290 | EnsemblPlantsGene:TraesCS7B01G012600 | EnsemblPlants:TraesCS7B01G012600.1 |
| InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr7B:-:8865042..8868495
Molecular Weight (calculated)
39230.4 Da
IEP (calculated)
6.079
GRAVY (calculated)
-0.533
Length
371 amino acids
Sequence
(BLAST)
(BLAST)
001: MQQDAGGSGG GDGNSMHLLL SILADGEEQA RRLLRELPPA DDEGQLLGRG PAAQCCRGVA EQLLCTFRKA IAVAKAIEAA GGDSPRSADE GAGAGRDAAQ
101: AQERQGQGVC KRRKGLPRWT EKFRIPDDAN LEYTPDDGFS WRKYGQKDIL GAKFPRGYYR CTYRNAQGCA ATRQVQRSDA DLAVFDVTYQ GAHTCLQAQR
201: RAAAPSPPPP PSAAHDVQRS PPALQDPEMQ LLENFRNGLK VETDGLPPLP FHGDGTTAFS FAYAATGAAG YSPAGSGGQQ LLQGGGCFVP ASFSSPAATT
301: SAGPGYFAHC TRGAHESPEL AEVVSAATAS DPAGFDYSMY LHQHDLDAHL PFQFDPMFGH PSSSHGQHGD A
101: AQERQGQGVC KRRKGLPRWT EKFRIPDDAN LEYTPDDGFS WRKYGQKDIL GAKFPRGYYR CTYRNAQGCA ATRQVQRSDA DLAVFDVTYQ GAHTCLQAQR
201: RAAAPSPPPP PSAAHDVQRS PPALQDPEMQ LLENFRNGLK VETDGLPPLP FHGDGTTAFS FAYAATGAAG YSPAGSGGQQ LLQGGGCFVP ASFSSPAATT
301: SAGPGYFAHC TRGAHESPEL AEVVSAATAS DPAGFDYSMY LHQHDLDAHL PFQFDPMFGH PSSSHGQHGD A
001: MEGRDMLSWE QKTLLSELIN GFDAAKKLQA RLREAPSPSS SFSSPATAVA ETNEILVKQI VSSYERSLLL LNWSSSPSVQ LIPTPVTVVP VANPGSVPES
101: PASINGSPRS EEFADGGGSS ESHHRQDYIF NSKKRKMLPK WSEKVRISPE RGLEGPQDDV FSWRKYGQKD ILGAKFPRSY YRCTHRSTQN CWATKQVQRS
201: DGDATVFEVT YRGTHTCSQA ITRTPPLASP EKRQDTRVKP AITQKPKDIL ESLKSNLTVR TDGLDDGKDV FSFPDTPPFY NYGTINGEFG HVESSPIFDV
301: VDWFNPTVEI DTTFPAFLHE SIYY
101: PASINGSPRS EEFADGGGSS ESHHRQDYIF NSKKRKMLPK WSEKVRISPE RGLEGPQDDV FSWRKYGQKD ILGAKFPRSY YRCTHRSTQN CWATKQVQRS
201: DGDATVFEVT YRGTHTCSQA ITRTPPLASP EKRQDTRVKP AITQKPKDIL ESLKSNLTVR TDGLDDGKDV FSFPDTPPFY NYGTINGEFG HVESSPIFDV
301: VDWFNPTVEI DTTFPAFLHE SIYY
Arabidopsis Description
WRKY53Probable WRKY transcription factor 53 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUP6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.