Factsheet for TraesCS4B01G121500.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G119700.1	Wheat	nucleus	98.65	98.65
TraesCS4A01G193600.1	Wheat	nucleus	98.65	98.65
HORVU4Hr1G022970.2	Barley	nucleus, plastid	96.4	76.7
Os11t0116900-01	Rice	nucleus	72.07	71.43
Os12t0116400-00	Rice	nucleus	70.72	70.72
OQU82729	Sorghum	nucleus	69.82	68.28
Zm00001d052357_P001	Maize	nucleus	64.86	63.16
OQU78676	Sorghum	nucleus	63.51	62.67
TraesCS4B01G176700.1	Wheat	nucleus	36.94	39.81
TraesCS3B01G375200.1	Wheat	nucleus	23.42	20.39
TraesCS4B01G170100.1	Wheat	nucleus	25.23	18.54
TraesCS1B01G440700.1	Wheat	nucleus	18.92	17.43
TraesCS3B01G375300.1	Wheat	nucleus	20.72	17.36
TraesCS1B01G440600.1	Wheat	nucleus	18.47	17.23
TraesCS2B01G121800.1	Wheat	nucleus	26.13	16.71
TraesCS1B01G440300.1	Wheat	nucleus	18.02	16.33
TraesCS1B01G440500.1	Wheat	nucleus	18.92	16.09
TraesCS1B01G310900.1	Wheat	nucleus	20.27	15.73
TraesCS7B01G249700.1	Wheat	nucleus	19.37	15.69
TraesCS1B01G311000.1	Wheat	nucleus	20.27	15.62
TraesCS5B01G183800.1	Wheat	nucleus	23.42	15.03
TraesCS2B01G121900.1	Wheat	nucleus	25.68	15.0
TraesCS2B01G517400.1	Wheat	nucleus	19.82	14.81
TraesCS2B01G187500.1	Wheat	nucleus	18.92	14.33
TraesCS2B01G056300.1	Wheat	nucleus	18.02	14.23
TraesCS5B01G183700.1	Wheat	nucleus	21.62	14.16
TraesCS3B01G375600.1	Wheat	nucleus	20.27	13.98
TraesCS2B01G056400.1	Wheat	nucleus, plastid	17.57	13.54
TraesCS3B01G375700.1	Wheat	nucleus	16.22	13.24
TraesCS7B01G012600.1	Wheat	nucleus	21.17	12.67
TraesCS3B01G375800.1	Wheat	nucleus	15.32	12.64
TraesCS1B01G243100.1	Wheat	nucleus	19.82	12.26
TraesCS6B01G108000.1	Wheat	nucleus	20.27	11.48

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	PFAM:PF03106	PFscan:PS50811
PANTHER:PTHR31282	PANTHER:PTHR31282:SF7	SMART:SM00774	SUPFAM:SSF118290	EnsemblPlantsGene:TraesCS4B01G121500	EnsemblPlants:TraesCS4B01G121500.1
InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr4B:-:143313027..143315700

Molecular Weight (calculated)

24546.2 Da

IEP (calculated)

8.205

GRAVY (calculated)

-0.805

Length

222 amino acids

Sequence
(BLAST)

001: MALDSVPSYP SDLGSSGRAT RTQQRIRKEE RTWTADTYAP YDDGHQWRKY GEKKLSNSNF PRFYYRCTYK TDLKCPATKQ VQQKDMSDPP LFTVTYFNHH
101: SCNTTSRPIG SAPDTTEQSS SRRAVSICFG SHATGEQPTF LTLPGTLQSP ASTTNQQSDR GAYGHQFQWT DTSPSAGDAP VKMETDSLAG TDASSGAASG
201: HALSRTLLPI GQSRCIEYFQ FL

Best Arabidopsis Sequence Match ( AT2G40740.1 )
(BLAST)

001: MYSYKKISYQ MEEVMSMIFH GMKLVKSLES SLPEKPPESL LTSLDEIVKT FSDANERLKM LLEIKNSETA LNKTKPVIVS VANQMLMQME PGLMQEYWLR
101: YGGSTSSQGT EAMFQTQLMA VDGGGERNLT AAVERSGASG SSTPRQRRRK DEGEEQTVLV AALRTGNTDL PPDDNHTWRK YGQKEILGSR FPRAYYRCTH
201: QKLYNCPAKK QVQRLNDDPF TFRVTYRGSH TCYNSTAPTA SSATPSTIPI SSVTTGHSVD YGLAVVDMAD VMFGSGGVGT NMDFIFPKND PS

Arabidopsis Description

WRKY55WRKY DNA-binding protein 55 [Source:TAIR;Acc:AT2G40740]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.