Factsheet for Os12t0116400-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os11t0116900-01	Rice	nucleus	96.85	95.98
TraesCS4D01G119700.1	Wheat	nucleus	70.72	70.72
TraesCS4B01G121500.1	Wheat	nucleus	70.72	70.72
TraesCS4A01G193600.1	Wheat	nucleus	70.72	70.72
OQU82729	Sorghum	nucleus	71.17	69.6
Zm00001d052357_P001	Maize	nucleus	67.12	65.35
OQU78676	Sorghum	nucleus	66.22	65.33
HORVU4Hr1G022970.2	Barley	nucleus, plastid	71.62	56.99
Os03t0321700-01	Rice	nucleus	41.44	43.81
Os05t0478800-00	Rice	nucleus	21.17	21.08
Os01t0820400-01	Rice	nucleus	24.77	20.75
Os11t0685700-00	Rice	nucleus	15.32	17.71
Os01t0820700-00	Rice	nucleus	22.52	17.67
Os03t0335200-01	Rice	nucleus	23.87	16.83
Os07t0680400-01	Rice	nucleus	25.23	16.82
Os05t0478700-00	Rice	nucleus	20.72	16.43
Os05t0322900-01	Rice	nucleus	22.97	15.64
Os05t0571200-01	Rice	nucleus	19.37	15.52
Os05t0478400-00	Rice	nucleus	23.87	14.8
Os08t0386200-01	Rice	nucleus	20.72	14.42
Os09t0334500-01	Rice	nucleus	22.97	14.13
Os06t0158100-00	Rice	nucleus	24.32	13.81
Os01t0656400-00	Rice	nucleus	16.67	13.5
Os01t0821600-01	Rice	nucleus	16.22	12.86
Os01t0821300-01	Rice	cytosol, nucleus	9.91	11.64
Os05t0321900-01	Rice	nucleus	21.17	10.98
Os11t0116600-00	Rice	nucleus	4.95	6.21

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EntrezGene:9269857	ProteinID:ABA95638.1	ProteinID:BAT15607.1	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576
EnsemblPlantsGene:Os12g0116400	EnsemblPlants:Os12t0116400-00	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31282	PANTHER:PTHR31282:SF7
UniProt:Q2QYK0	SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI0000681B68	InterPro:WRKY_dom	InterPro:WRKY_dom_sf
RefSeq:XP_015620027.1	SEG:seg	:	:	:	:

Description

WRKY GENE 97Similar to WRKY DNA binding domain containing protein, expressed. (Os12t0116400-00)

Coordinates

chr12:-:802534..806073

Molecular Weight (calculated)

25077.9 Da

IEP (calculated)

8.662

GRAVY (calculated)

-0.856

Length

222 amino acids

Sequence
(BLAST)

001: MALDSVPSYP SDLGSSRART PQQQRVRKEE RTWTTDTYAP YDDGHQWRKY GEKKLSNSNF PRFYYRCTYK NDMKCPATKQ VQQKDTNDPP LFSVTYFNHH
101: TCNSSPKIVG STPDSTVQSR KAISICFNSH GKTGELPTFL SPSASLLSPS MQPYSSNQQP DMNTYSRQFH WADTSSSTSY APVKMEADDY AEASASPSTT
201: GALSRTLLPI GQSRCIEYFH FL

Best Arabidopsis Sequence Match ( AT2G40740.1 )
(BLAST)

001: MYSYKKISYQ MEEVMSMIFH GMKLVKSLES SLPEKPPESL LTSLDEIVKT FSDANERLKM LLEIKNSETA LNKTKPVIVS VANQMLMQME PGLMQEYWLR
101: YGGSTSSQGT EAMFQTQLMA VDGGGERNLT AAVERSGASG SSTPRQRRRK DEGEEQTVLV AALRTGNTDL PPDDNHTWRK YGQKEILGSR FPRAYYRCTH
201: QKLYNCPAKK QVQRLNDDPF TFRVTYRGSH TCYNSTAPTA SSATPSTIPI SSVTTGHSVD YGLAVVDMAD VMFGSGGVGT NMDFIFPKND PS

Arabidopsis Description

WRKY55WRKY DNA-binding protein 55 [Source:TAIR;Acc:AT2G40740]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.