Factsheet for Os05t0478400-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 5
plastid 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G300700.1	Wheat	nucleus	47.49	56.11
HORVU1Hr1G069620.7	Barley	nucleus	46.93	56.0
TraesCS1A01G301100.1	Wheat	plastid	47.21	55.78
TraesCS1D01G300500.1	Wheat	plastid	44.41	51.79
TraesCS1D01G300300.1	Wheat	nucleus	44.13	51.47
TraesCS1A01G300900.1	Wheat	nucleus	44.41	51.46
TraesCS2B01G056300.1	Wheat	nucleus	35.47	45.2
TraesCS2A01G043600.1	Wheat	nucleus	33.8	43.68
HORVU2Hr1G006600.1	Barley	nucleus	38.27	42.68
TraesCS2D01G042700.1	Wheat	nucleus	34.92	42.66
TraesCS2A01G043700.1	Wheat	nucleus	32.4	42.65
TraesCS2A01G043800.1	Wheat	nucleus	33.8	40.88
TraesCS2B01G056400.1	Wheat	nucleus, plastid	32.68	40.62
Os05t0478800-00	Rice	nucleus	24.02	38.56
Os01t0821600-01	Rice	nucleus	27.65	35.36
PGSC0003DMT400070939	Potato	nucleus	17.32	27.8
PGSC0003DMT400021625	Potato	nucleus	16.2	26.61
KRH09521	Soybean	nucleus	17.88	24.15
Os12t0116400-00	Rice	nucleus	14.8	23.87
Os11t0116900-01	Rice	nucleus	14.8	23.66
Os11t0685700-00	Rice	nucleus	12.57	23.44
KRH16921	Soybean	nucleus	15.64	23.33
Os03t0321700-01	Rice	nucleus	13.13	22.38
VIT_13s0067g03140.t01	Wine grape	nucleus	19.55	22.36
PGSC0003DMT400053122	Potato	nucleus	16.76	21.66
Os05t0571200-01	Rice	nucleus	16.76	21.66
Solyc03g095770.2.1	Tomato	nucleus	16.48	21.61
GSMUA_Achr5P07490_001	Banana	endoplasmic reticulum	20.11	21.49
Os05t0322900-01	Rice	nucleus	19.55	21.47
KRH53716	Soybean	nucleus	18.72	21.0
Os01t0820700-00	Rice	nucleus	16.48	20.85
KRH64216	Soybean	nucleus	18.44	20.82
KRH21928	Soybean	nucleus	15.64	20.74
Os08t0386200-01	Rice	nucleus	18.44	20.69
KRH00435	Soybean	nucleus	17.04	20.4
KRH40720	Soybean	nucleus	17.04	20.33
Os07t0680400-01	Rice	nucleus	18.72	20.12
Solyc09g015770.2.1	Tomato	extracellular, nucleus	15.92	19.59
KRH16920	Soybean	nucleus	16.48	19.47
PGSC0003DMT400075091	Potato	nucleus	15.92	19.45
KRH16918	Soybean	nucleus	17.88	19.45
AT3G56400.1	Thale cress	nucleus	15.64	19.05
Os01t0656400-00	Rice	nucleus	14.53	18.98
CDX72140	Canola	nucleus	14.53	18.84
Os09t0334500-01	Rice	nucleus	18.99	18.84
CDY35441	Canola	nucleus	17.88	18.82
Bra000203.1-P	Field mustard	nucleus	17.88	18.82
Os03t0335200-01	Rice	nucleus	16.48	18.73
KRH21925	Soybean	nucleus	15.36	18.71
CDY22474	Canola	nucleus	17.6	18.53
Os01t0820400-01	Rice	nucleus	13.69	18.49
CDY66845	Canola	nucleus	14.8	18.47
KRH21926	Soybean	nucleus	15.08	18.24
VIT_08s0058g01390.t01	Wine grape	nucleus	18.16	18.21
Bra007243.1-P	Field mustard	nucleus	13.97	18.12
CDY27218	Canola	nucleus	13.97	18.12
Bra014692.1-P	Field mustard	nucleus	14.25	17.89
CDX75992	Canola	nucleus	14.25	17.89
Os05t0478700-00	Rice	nucleus	13.97	17.86
CDX79972	Canola	nucleus	16.76	17.8
Bra004586.1-P	Field mustard	nucleus	16.76	17.7
CDY23883	Canola	nucleus	16.76	17.7
Bra003239.1-P	Field mustard	nucleus	13.97	17.67
CDX67645	Canola	nucleus	13.97	17.67
KRH64882	Soybean	nucleus	11.45	17.45
CDY32013	Canola	nucleus	13.69	17.31
CDY06967	Canola	nucleus	15.36	16.67
KRH21927	Soybean	nucleus	13.97	16.67
Os06t0158100-00	Rice	nucleus	18.16	16.62
Bra016974.1-P	Field mustard	nucleus	15.08	16.36
CDY14738	Canola	nucleus	14.8	16.06
AT2G40750.1	Thale cress	nucleus	15.08	15.61
Os05t0321900-01	Rice	nucleus	15.36	12.85
Os01t0821300-01	Rice	cytosol, nucleus	6.42	12.17
Os11t0116600-00	Rice	nucleus	2.23	4.52

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	UniProt:A0A0P0WNK5	ProteinID:BAS94554.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	EnsemblPlantsGene:Os05g0478400
EnsemblPlants:Os05t0478400-00	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31282	PANTHER:PTHR31282:SF10	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI0003939837	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:

Description

WRKY GENE 48Similar to WRKY transcription factor 48. (Os05t0478400-00)

Coordinates

chr5:-:23529423..23530499

Molecular Weight (calculated)

38075.6 Da

IEP (calculated)

4.455

GRAVY (calculated)

-0.509

Length

358 amino acids

Sequence
(BLAST)

001: MALIATGATA TATAAPVASP AASSMASELM AQGRESAAVL EALLHGASLP PAHGGAHALA AEILRCCDRA LAALRAGGDA ESSSADTKRK PATAQPSTRR
101: RRRYIYMYVS SRSCDGARDR AATQQEIFCR ATASGGGAAA AAEPARVEKA RTSEDGFLWR KYGQKEIKNS KHPRLYYRCS YKDDHGCTAT KQVQQSEEDP
201: SLYVITYFGD HTCSCQTAAA AAMDDDDDDE NSQHFVINFG PATASRSGSP PLLYDDGDDG DVWRETAATP PSSRQSRCSP EGDGEESGVK MSKEEPVDSC
301: PGPSAVSSPA DVVSCSSPAM EPDLLGCLNW DDDFGDSSFV DADEFMNFDE IDLFQIYS

Best Arabidopsis Sequence Match ( AT5G01900.1 )
(BLAST)

001: MNSCQQKAME KLLHGHGCAN QLLIMDQTES DSSMEREDLA KSVLHCFSDA LSILIDTNDH QDDQSNNSSP QDSSPVLESS RKPLHKRGRK TSMAESSDYH
101: RHESSTPIYH DGFLWRKYGQ KQIKESEYQR SYYKCAYTKD QNCEAKKQVQ KIQHNPPLYS TTYFGQHICQ LHQAYATFPI DTSDFEEHEG SHMIRFGHPN
201: ISFSSSTSNL RQHQNHQDRI KDEYMKPVIA EDWSPSQWMS SEVALAVEAF EFNPFWTSHD LSS

Arabidopsis Description

WRKY62WRKY62 [Source:UniProtKB/TrEMBL;Acc:A0A178U8T9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.