Subcellular Localization
min:
: max
Winner_takes_all: extracellular, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
extracellular:
29876421
|
msms PMID:
29876421
doi
Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Solyc06g075780.1.1 | |
| Solyc11g073060.1.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G56400.1 | Solyc06g075780.1.1 | AT3G46090.1 | 17259181 |
| AT3G56400.1 | Solyc11g073060.1.1 | AT3G46090.1 | 17259181 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400075091 | Potato | nucleus | 93.81 | 93.17 |
| KRH21928 | Soybean | nucleus | 32.3 | 34.81 |
| KRH21926 | Soybean | nucleus | 33.33 | 32.77 |
| KRH21925 | Soybean | nucleus | 32.3 | 31.97 |
| Solyc03g095770.2.1 | Tomato | nucleus | 29.55 | 31.5 |
| KRH21927 | Soybean | nucleus | 31.96 | 31.0 |
| TraesCS7B01G249700.1 | Wheat | nucleus | 24.05 | 25.55 |
| TraesCS7D01G345700.1 | Wheat | nucleus | 24.74 | 24.16 |
| Solyc05g050310.1.1 | Tomato | cytosol, nucleus | 4.81 | 23.73 |
| HORVU4Hr1G050320.2 | Barley | nucleus | 24.05 | 23.49 |
| TraesCS4D01G172200.1 | Wheat | nucleus | 24.05 | 23.41 |
| TraesCS4B01G170100.1 | Wheat | nucleus | 24.05 | 23.18 |
| HORVU7Hr1G083270.2 | Barley | nucleus | 23.37 | 22.08 |
| Solyc05g050330.2.1 | Tomato | nucleus | 18.21 | 21.72 |
| TraesCS2A01G489500.1 | Wheat | nucleus | 21.65 | 21.43 |
| Os05t0322900-01 | Rice | nucleus | 23.71 | 21.17 |
| EES15768 | Sorghum | nucleus | 24.05 | 20.96 |
| TraesCS4A01G135000.1 | Wheat | nucleus | 18.21 | 20.87 |
| TraesCS2D01G489700.1 | Wheat | nucleus | 20.96 | 20.82 |
| HORVU0Hr1G030830.1 | Barley | nucleus, plastid | 19.59 | 20.36 |
| TraesCS2B01G517400.1 | Wheat | nucleus | 20.62 | 20.2 |
| Solyc01g095630.2.1 | Tomato | nucleus | 23.02 | 19.94 |
| TraesCS7A01G338500.1 | Wheat | nucleus, plastid | 25.09 | 19.89 |
| TraesCS1A01G300900.1 | Wheat | nucleus | 20.96 | 19.74 |
| Solyc10g009550.2.1 | Tomato | nucleus | 19.59 | 19.66 |
| GSMUA_Achr5P07490_001 | Banana | endoplasmic reticulum | 22.34 | 19.4 |
| CDX75992 | Canola | nucleus | 18.56 | 18.95 |
| Bra014692.1-P | Field mustard | nucleus | 18.56 | 18.95 |
| Zm00001d023615_P001 | Maize | plastid | 24.74 | 18.9 |
| Zm00001d023616_P001 | Maize | plastid | 24.74 | 18.9 |
| Solyc08g082110.2.1 | Tomato | nucleus | 21.99 | 18.88 |
| Os05t0478800-00 | Rice | nucleus | 14.43 | 18.83 |
| HORVU1Hr1G069620.7 | Barley | nucleus | 19.24 | 18.67 |
| TraesCS1D01G300500.1 | Wheat | plastid | 19.59 | 18.57 |
| TraesCS2B01G056300.1 | Wheat | nucleus | 17.87 | 18.51 |
| TraesCS2A01G043600.1 | Wheat | nucleus | 17.53 | 18.41 |
| TraesCS2A01G104900.1 | Wheat | nucleus | 21.31 | 18.4 |
| CDX67645 | Canola | nucleus | 17.87 | 18.37 |
| Bra003239.1-P | Field mustard | nucleus | 17.87 | 18.37 |
| AT3G56400.1 | Thale cress | nucleus | 18.56 | 18.37 |
| TraesCS2D01G104700.1 | Wheat | nucleus | 21.65 | 18.21 |
| TraesCS2D01G104600.1 | Wheat | nucleus | 20.96 | 18.15 |
| TraesCS1D01G300700.1 | Wheat | nucleus | 18.9 | 18.15 |
| CDY66845 | Canola | nucleus | 17.87 | 18.12 |
| Bra007243.1-P | Field mustard | nucleus | 17.18 | 18.12 |
| CDY27218 | Canola | nucleus | 17.18 | 18.12 |
| CDX72140 | Canola | nucleus | 17.18 | 18.12 |
| HORVU7Hr1G075960.1 | Barley | nucleus, plastid | 18.21 | 18.09 |
| TraesCS2B01G056400.1 | Wheat | nucleus, plastid | 17.87 | 18.06 |
| Solyc08g008280.2.1 | Tomato | nucleus | 22.34 | 18.06 |
| Zm00001d022437_P001 | Maize | mitochondrion, nucleus | 20.96 | 18.05 |
| CDY32013 | Canola | nucleus | 17.53 | 18.02 |
| TraesCS2A01G043700.1 | Wheat | nucleus | 16.84 | 18.01 |
| HORVU2Hr1G109330.1 | Barley | mitochondrion, nucleus, vacuole | 19.93 | 17.85 |
| TraesCS1A01G301100.1 | Wheat | plastid | 18.56 | 17.82 |
| TraesCS2D01G042700.1 | Wheat | nucleus | 17.87 | 17.75 |
| Solyc05g050340.2.1 | Tomato | nucleus | 19.93 | 17.74 |
| EES01669 | Sorghum | nucleus | 16.84 | 17.69 |
| EER94905 | Sorghum | nucleus | 19.93 | 17.68 |
| TraesCS1D01G300300.1 | Wheat | nucleus | 18.56 | 17.59 |
| Os01t0821600-01 | Rice | nucleus | 16.84 | 17.5 |
| Solyc05g050300.1.1 | Tomato | nucleus | 11.68 | 17.44 |
| CDY14738 | Canola | nucleus | 19.59 | 17.27 |
| HORVU2Hr1G017740.3 | Barley | nucleus | 20.62 | 17.24 |
| TraesCS2D01G104500.1 | Wheat | nucleus | 20.62 | 17.09 |
| CDY35441 | Canola | nucleus | 19.93 | 17.06 |
| Bra000203.1-P | Field mustard | nucleus | 19.93 | 17.06 |
| CDY22474 | Canola | nucleus | 19.93 | 17.06 |
| CDX79972 | Canola | nucleus | 19.59 | 16.91 |
| TraesCS2A01G043800.1 | Wheat | nucleus | 17.18 | 16.89 |
| TraesCS2B01G121900.1 | Wheat | nucleus | 21.99 | 16.84 |
| Os07t0680400-01 | Rice | nucleus | 19.24 | 16.82 |
| CDY23883 | Canola | nucleus | 19.59 | 16.81 |
| Bra004586.1-P | Field mustard | nucleus | 19.59 | 16.81 |
| TraesCS2B01G121800.1 | Wheat | nucleus | 19.93 | 16.71 |
| CDY06967 | Canola | nucleus | 18.9 | 16.67 |
| Bra016974.1-P | Field mustard | nucleus | 18.9 | 16.67 |
| EER99917 | Sorghum | mitochondrion, nucleus | 20.27 | 16.67 |
| Zm00001d047523_P001 | Maize | nucleus | 18.56 | 16.62 |
| TraesCS2A01G104800.1 | Wheat | nucleus | 19.93 | 16.57 |
| Solyc06g048870.1.1 | Tomato | nucleus, vacuole | 13.75 | 16.46 |
| HORVU3Hr1G080980.1 | Barley | nucleus | 13.75 | 16.33 |
| Os03t0335200-01 | Rice | nucleus | 17.53 | 16.19 |
| AT2G40750.1 | Thale cress | nucleus | 19.24 | 16.18 |
| Zm00001d010617_P001 | Maize | nucleus | 17.53 | 16.09 |
| Zm00001d043060_P001 | Maize | nucleus | 15.81 | 16.08 |
| TraesCS3B01G375800.1 | Wheat | nucleus | 14.78 | 15.99 |
| Os05t0478400-00 | Rice | nucleus | 19.59 | 15.92 |
| Zm00001d012505_P001 | Maize | nucleus | 14.43 | 15.91 |
| TraesCS3D01G337600.1 | Wheat | nucleus | 14.78 | 15.87 |
| TraesCS3A01G343700.1 | Wheat | nucleus | 14.78 | 15.81 |
| TraesCS3A01G343900.1 | Wheat | nucleus | 14.78 | 15.75 |
| HORVU2Hr1G017720.1 | Barley | nucleus, plastid | 19.59 | 15.49 |
| TraesCS3B01G375700.1 | Wheat | nucleus | 14.43 | 15.44 |
| HORVU2Hr1G006600.1 | Barley | nucleus | 16.84 | 15.26 |
| TraesCS3D01G337500.1 | Wheat | nucleus | 14.09 | 15.19 |
| Solyc03g007380.1.1 | Tomato | nucleus | 18.21 | 15.01 |
| HORVU3Hr1G081030.3 | Barley | nucleus | 15.12 | 13.75 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EMBL:HQ706095 | UniProt:I3NN77 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 |
| PFscan:PS50811 | PANTHER:PTHR31282 | PANTHER:PTHR31282:SF37 | SMART:SM00774 | SUPFAM:SSF118290 | EnsemblPlantsGene:Solyc09g015770.2 |
| EnsemblPlants:Solyc09g015770.2.1 | UniParc:UPI000263A44A | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | : | : |
Description
WRKY3 [Source:UniProtKB/TrEMBL;Acc:I3NN77]
Coordinates
chr9:-:10987958..10989890
Molecular Weight (calculated)
33251.3 Da
IEP (calculated)
5.612
GRAVY (calculated)
-0.791
Length
291 amino acids
Sequence
(BLAST)
(BLAST)
001: MDNSSSDLNR AIEGLIRGRE FTRRLKQIIK ISGGEVENIM AEDLVAKILD SFSETLSVIN NSDVVVATAV EVKSPEDYSS GSCKSSDRRG CYKRRKTSES
101: DIKESSDLVD DGHAWRKYGQ KQILNSTYPR HYFRCTHKYD QKCQASKQVQ KIQDNPQRFR TTYYGHHTCK AFPRVSQIIL DSQIDGNSNY ISFDQNHTFP
201: SIKQETKEEV VFRFYPKIED QIQSSSSDYF LPNDHDHDHL TPATFEASGS RMTSPDVISS GVYSSCTTTS NNDNLEIDID FEEGLWNFDQ V
101: DIKESSDLVD DGHAWRKYGQ KQILNSTYPR HYFRCTHKYD QKCQASKQVQ KIQDNPQRFR TTYYGHHTCK AFPRVSQIIL DSQIDGNSNY ISFDQNHTFP
201: SIKQETKEEV VFRFYPKIED QIQSSSSDYF LPNDHDHDHL TPATFEASGS RMTSPDVISS GVYSSCTTTS NNDNLEIDID FEEGLWNFDQ V
001: MDTNKAKKLK VMNQLVEGHD LTTQLQQLLS QPGSGLEDLV AKILVCFNNT ISVLDTFEPI SSSSSLAAVE GSQNASCDND GKFEDSGDSR KRLGPVKGKR
101: GCYKRKKRSE TCTIESTILE DAFSWRKYGQ KEILNAKFPR SYFRCTHKYT QGCKATKQVQ KVELEPKMFS ITYIGNHTCN TNAETPKSKT CDHHDEIFMD
201: SEDHKSPSLS TSMKEEDNPH RHHGSSTEND LSLVWPEMVF EEDYHHQASY VNGKTSTSID VLGSQDLMVF GGGGDFEFSE NEHFSIFSSC SNLS
101: GCYKRKKRSE TCTIESTILE DAFSWRKYGQ KEILNAKFPR SYFRCTHKYT QGCKATKQVQ KVELEPKMFS ITYIGNHTCN TNAETPKSKT CDHHDEIFMD
201: SEDHKSPSLS TSMKEEDNPH RHHGSSTEND LSLVWPEMVF EEDYHHQASY VNGKTSTSID VLGSQDLMVF GGGGDFEFSE NEHFSIFSSC SNLS
Arabidopsis Description
WRKY70Probable WRKY transcription factor 70 [Source:UniProtKB/Swiss-Prot;Acc:Q9LY00]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.