Factsheet for TraesCS2A01G043600.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

mitochondrion 3
nucleus 3
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G056300.1	Wheat	nucleus	88.45	87.19
TraesCS2A01G043800.1	Wheat	nucleus	92.06	86.15
TraesCS2D01G042700.1	Wheat	nucleus	89.53	84.64
TraesCS2A01G043700.1	Wheat	nucleus	61.01	62.13
HORVU2Hr1G006600.1	Barley	nucleus	71.12	61.37
TraesCS1A01G300900.1	Wheat	nucleus	53.43	47.9
TraesCS1A01G301100.1	Wheat	plastid	51.62	47.19
TraesCS3A01G343900.1	Wheat	nucleus	33.57	34.07
TraesCS3A01G343700.1	Wheat	nucleus	33.21	33.82
Os05t0478400-00	Rice	nucleus	43.68	33.8
PGSC0003DMT400021625	Potato	nucleus	18.05	22.94
PGSC0003DMT400070939	Potato	nucleus	17.33	21.52
TraesCS1A01G410700.1	Wheat	nucleus	19.13	21.46
KRH16921	Soybean	nucleus	18.41	21.25
KRH09521	Soybean	nucleus	19.86	20.75
KRH40720	Soybean	nucleus	22.38	20.67
KRH00435	Soybean	nucleus	22.02	20.4
TraesCS3A01G343000.1	Wheat	nucleus	19.13	20.38
TraesCS1A01G410500.1	Wheat	nucleus	18.05	19.76
TraesCS2A01G161500.1	Wheat	nucleus	20.94	19.59
KRH21928	Soybean	nucleus	18.41	18.89
KRH64216	Soybean	nucleus	21.3	18.61
GSMUA_Achr5P07490_001	Banana	endoplasmic reticulum	22.38	18.51
KRH53716	Soybean	nucleus	21.3	18.5
TraesCS4A01G193600.1	Wheat	nucleus	14.8	18.47
TraesCS1A01G410600.1	Wheat	nucleus	15.52	18.45
KRH21926	Soybean	nucleus	19.49	18.24
TraesCS2A01G489500.1	Wheat	nucleus	19.13	18.03
VIT_13s0067g03140.t01	Wine grape	nucleus	20.22	17.89
KRH16920	Soybean	nucleus	19.49	17.82
TraesCS1A01G301000.1	Wheat	nucleus	18.41	17.77
TraesCS4A01G135000.1	Wheat	nucleus	16.25	17.72
KRH21925	Soybean	nucleus	18.77	17.69
Solyc03g095770.2.1	Tomato	nucleus	17.33	17.58
Solyc09g015770.2.1	Tomato	extracellular, nucleus	18.41	17.53
TraesCS5A01G185600.1	Wheat	nucleus	21.66	17.49
TraesCS3A01G343100.1	Wheat	nucleus	16.61	17.36
PGSC0003DMT400053122	Potato	nucleus	17.33	17.33
TraesCS2A01G104900.1	Wheat	nucleus	20.94	17.21
PGSC0003DMT400075091	Potato	nucleus	18.05	17.06
TraesCS4A01G128100.1	Wheat	nucleus	12.27	16.5
KRH21927	Soybean	nucleus	17.69	16.33
TraesCS5A01G185700.1	Wheat	nucleus	20.58	16.33
Bra007243.1-P	Field mustard	nucleus	16.25	16.3
CDY27218	Canola	nucleus	16.25	16.3
TraesCS1A01G301200.1	Wheat	nucleus	16.97	16.21
TraesCS7A01G338500.1	Wheat	nucleus, plastid	21.3	16.08
TraesCS2A01G104800.1	Wheat	nucleus	20.22	16.0
CDX72140	Canola	nucleus	15.88	15.94
KRH16918	Soybean	nucleus	18.77	15.81
TraesCS7A01G116000.1	Wheat	nucleus	21.3	15.65
VIT_08s0058g01390.t01	Wine grape	nucleus	19.86	15.41
KRH64882	Soybean	nucleus	13.0	15.32
Bra014692.1-P	Field mustard	nucleus	15.52	15.09
CDX75992	Canola	nucleus	15.52	15.09
AT3G56400.1	Thale cress	nucleus	15.88	14.97
TraesCS3A01G343600.1	Wheat	nucleus	17.33	14.91
CDY35441	Canola	nucleus	18.05	14.71
Bra000203.1-P	Field mustard	nucleus	18.05	14.71
CDY66845	Canola	nucleus	15.16	14.63
CDY22474	Canola	nucleus	17.69	14.41
Bra003239.1-P	Field mustard	nucleus	14.44	14.13
CDX67645	Canola	nucleus	14.44	14.13
CDX79972	Canola	nucleus	16.97	13.95
TraesCS2A01G497400.1	Wheat	nucleus	18.05	13.89
Bra004586.1-P	Field mustard	nucleus	16.97	13.86
CDY23883	Canola	nucleus	16.97	13.86
CDY32013	Canola	nucleus	14.08	13.78
Bra016974.1-P	Field mustard	nucleus	16.25	13.64
TraesCS3A01G343500.1	Wheat	nucleus	17.33	13.37
CDY06967	Canola	nucleus	15.88	13.33
CDY14738	Canola	nucleus	15.88	13.33
AT2G40750.1	Thale cress	nucleus	16.25	13.01
TraesCS6A01G080500.1	Wheat	nucleus	16.97	12.02

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	PFAM:PF03106	PFscan:PS50811
PANTHER:PTHR31282	PANTHER:PTHR31282:SF10	SMART:SM00774	SUPFAM:SSF118290	EnsemblPlantsGene:TraesCS2A01G043600	EnsemblPlants:TraesCS2A01G043600.1
InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2A:-:17440599..17441707

Molecular Weight (calculated)

30268.3 Da

IEP (calculated)

6.700

GRAVY (calculated)

-0.542

Length

277 amino acids

Sequence
(BLAST)

001: MAALVTPAAR VSELMAQGRK SAAALEALLQ VQDDHTGIRE LAAEILCCCD RALAALHSKA GRKKRKLGPH GTATQTTRPK RRTRTTVGGE TAAATRVERK
101: KNWDDGFVWT KYGQKDIRGS NHPRHYFRCA YTLDAGGCPA RRQVQRSEEQ DPPLYVLTYF ADHTCCHGAE AAFAALDDVK ILDFGSVGSR SPRPDDGDAP
201: SGKTSRSEEL PAEAAKVEST PLPDMRPAGT VPELSSSTDD IHYCSSAGTC SDWDFFGNCS FDYVSDFFDV EDIALYR

Best Arabidopsis Sequence Match ( AT5G01900.1 )
(BLAST)

001: MNSCQQKAME KLLHGHGCAN QLLIMDQTES DSSMEREDLA KSVLHCFSDA LSILIDTNDH QDDQSNNSSP QDSSPVLESS RKPLHKRGRK TSMAESSDYH
101: RHESSTPIYH DGFLWRKYGQ KQIKESEYQR SYYKCAYTKD QNCEAKKQVQ KIQHNPPLYS TTYFGQHICQ LHQAYATFPI DTSDFEEHEG SHMIRFGHPN
201: ISFSSSTSNL RQHQNHQDRI KDEYMKPVIA EDWSPSQWMS SEVALAVEAF EFNPFWTSHD LSS

Arabidopsis Description

WRKY62WRKY62 [Source:UniProtKB/TrEMBL;Acc:A0A178U8T9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.