Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000203.1-P | Field mustard | nucleus | 97.06 | 97.06 |
| CDY35441 | Canola | nucleus | 97.06 | 97.06 |
| CDX79972 | Canola | nucleus | 77.65 | 78.34 |
| CDY23883 | Canola | nucleus | 77.06 | 77.29 |
| CDY06967 | Canola | nucleus | 70.29 | 72.42 |
| CDY14738 | Canola | nucleus | 70.0 | 72.12 |
| AT2G40750.1 | Thale cress | nucleus | 71.18 | 69.94 |
| CDX72140 | Canola | nucleus | 40.88 | 50.36 |
| CDY32013 | Canola | nucleus | 41.76 | 50.18 |
| CDX67645 | Canola | nucleus | 41.47 | 49.82 |
| CDY27218 | Canola | nucleus | 40.0 | 49.28 |
| CDX75992 | Canola | nucleus | 39.71 | 47.37 |
| CDY66845 | Canola | nucleus | 39.41 | 46.69 |
| PGSC0003DMT400070939 | Potato | nucleus | 18.24 | 27.8 |
| PGSC0003DMT400021625 | Potato | nucleus | 17.65 | 27.52 |
| CDY13358 | Canola | nucleus | 12.35 | 26.92 |
| KRH16921 | Soybean | nucleus | 17.06 | 24.17 |
| CDY06968 | Canola | nucleus | 10.88 | 23.87 |
| VIT_13s0067g03140.t01 | Wine grape | nucleus | 21.47 | 23.32 |
| KRH53716 | Soybean | nucleus | 21.18 | 22.57 |
| Os05t0478800-00 | Rice | nucleus | 14.71 | 22.42 |
| KRH64216 | Soybean | nucleus | 20.88 | 22.4 |
| TraesCS1D01G300700.1 | Wheat | nucleus | 19.71 | 22.11 |
| KRH09521 | Soybean | nucleus | 17.06 | 21.89 |
| KRH40720 | Soybean | nucleus | 19.12 | 21.67 |
| PGSC0003DMT400053122 | Potato | nucleus | 17.65 | 21.66 |
| Solyc03g095770.2.1 | Tomato | nucleus | 17.35 | 21.61 |
| KRH16918 | Soybean | nucleus | 20.88 | 21.58 |
| KRH21928 | Soybean | nucleus | 17.06 | 21.48 |
| KRH16920 | Soybean | nucleus | 19.12 | 21.45 |
| TraesCS7B01G249700.1 | Wheat | nucleus | 17.06 | 21.17 |
| TraesCS1A01G301100.1 | Wheat | plastid | 18.82 | 21.12 |
| CDX75991 | Canola | nucleus | 16.18 | 20.83 |
| CDY59625 | Canola | nucleus | 16.18 | 20.83 |
| KRH00435 | Soybean | nucleus | 18.24 | 20.74 |
| CDY65042 | Canola | nucleus | 20.0 | 20.61 |
| CDX89127 | Canola | nucleus | 16.76 | 20.58 |
| CDX94221 | Canola | nucleus | 19.12 | 20.25 |
| CDY25271 | Canola | nucleus | 19.71 | 20.24 |
| CDX87141 | Canola | nucleus | 18.53 | 20.19 |
| CDX83367 | Canola | nucleus | 16.47 | 20.14 |
| PGSC0003DMT400075091 | Potato | nucleus | 17.35 | 20.14 |
| CDY10969 | Canola | nucleus | 19.12 | 20.12 |
| TraesCS2A01G489500.1 | Wheat | nucleus | 17.35 | 20.07 |
| CDY03518 | Canola | nucleus | 18.53 | 20.0 |
| KRH21926 | Soybean | nucleus | 17.35 | 19.93 |
| Solyc09g015770.2.1 | Tomato | extracellular, nucleus | 17.06 | 19.93 |
| HORVU1Hr1G069620.7 | Barley | nucleus | 17.35 | 19.67 |
| CDX95699 | Canola | nucleus | 16.47 | 19.65 |
| HORVU0Hr1G030830.1 | Barley | nucleus, plastid | 16.18 | 19.64 |
| CDY47621 | Canola | nucleus | 18.24 | 19.62 |
| CDY19847 | Canola | nucleus | 17.94 | 19.55 |
| CDY42043 | Canola | nucleus | 16.76 | 19.45 |
| TraesCS1A01G300900.1 | Wheat | nucleus | 17.65 | 19.42 |
| KRH21925 | Soybean | nucleus | 16.76 | 19.39 |
| CDX80015 | Canola | nucleus | 16.76 | 19.26 |
| TraesCS1D01G300500.1 | Wheat | plastid | 17.35 | 19.22 |
| CDX80414 | Canola | nucleus | 17.65 | 19.17 |
| CDX88077 | Canola | nucleus | 17.65 | 19.17 |
| TraesCS7D01G345700.1 | Wheat | nucleus | 16.76 | 19.13 |
| TraesCS2D01G489700.1 | Wheat | nucleus | 16.47 | 19.11 |
| TraesCS2B01G517400.1 | Wheat | nucleus | 16.47 | 18.86 |
| Os05t0322900-01 | Rice | nucleus | 17.94 | 18.71 |
| Os07t0680400-01 | Rice | nucleus | 18.24 | 18.62 |
| TraesCS4B01G170100.1 | Wheat | nucleus | 16.47 | 18.54 |
| HORVU7Hr1G083270.2 | Barley | nucleus | 16.76 | 18.51 |
| HORVU4Hr1G050320.2 | Barley | nucleus | 16.18 | 18.46 |
| TraesCS4D01G172200.1 | Wheat | nucleus | 16.18 | 18.39 |
| KRH64882 | Soybean | nucleus | 12.65 | 18.3 |
| CDY71829 | Canola | nucleus | 13.53 | 18.25 |
| TraesCS1D01G300300.1 | Wheat | nucleus | 16.47 | 18.24 |
| CDY22473 | Canola | nucleus | 15.88 | 18.0 |
| VIT_08s0058g01390.t01 | Wine grape | nucleus | 18.82 | 17.93 |
| GSMUA_Achr5P07490_001 | Banana | endoplasmic reticulum | 17.65 | 17.91 |
| Os01t0821600-01 | Rice | nucleus | 14.71 | 17.86 |
| HORVU2Hr1G109330.1 | Barley | mitochondrion, nucleus, vacuole | 17.06 | 17.85 |
| HORVU2Hr1G006600.1 | Barley | nucleus | 16.76 | 17.76 |
| TraesCS2A01G043600.1 | Wheat | nucleus | 14.41 | 17.69 |
| KRH21927 | Soybean | nucleus | 15.59 | 17.67 |
| EES15768 | Sorghum | nucleus | 17.35 | 17.66 |
| TraesCS2A01G043700.1 | Wheat | nucleus | 14.12 | 17.65 |
| CDY35442 | Canola | nucleus | 15.59 | 17.61 |
| Os05t0478400-00 | Rice | nucleus | 18.53 | 17.6 |
| TraesCS2B01G056300.1 | Wheat | nucleus | 14.41 | 17.44 |
| TraesCS3A01G343700.1 | Wheat | nucleus | 13.82 | 17.28 |
| TraesCS2A01G104900.1 | Wheat | nucleus | 17.06 | 17.21 |
| TraesCS3D01G337500.1 | Wheat | nucleus | 13.53 | 17.04 |
| EES01669 | Sorghum | nucleus | 13.82 | 16.97 |
| Zm00001d047523_P001 | Maize | nucleus | 16.18 | 16.92 |
| TraesCS3B01G375700.1 | Wheat | nucleus | 13.53 | 16.91 |
| TraesCS2A01G043800.1 | Wheat | nucleus | 14.71 | 16.89 |
| Zm00001d022437_P001 | Maize | mitochondrion, nucleus | 16.76 | 16.86 |
| Zm00001d010617_P001 | Maize | nucleus | 15.59 | 16.72 |
| TraesCS2B01G056400.1 | Wheat | nucleus, plastid | 14.12 | 16.67 |
| TraesCS2D01G104600.1 | Wheat | nucleus | 16.47 | 16.67 |
| TraesCS3D01G337600.1 | Wheat | nucleus | 13.24 | 16.61 |
| TraesCS4A01G135000.1 | Wheat | nucleus | 12.35 | 16.54 |
| TraesCS3A01G343900.1 | Wheat | nucleus | 13.24 | 16.48 |
| TraesCS2D01G104700.1 | Wheat | nucleus | 16.76 | 16.47 |
| Zm00001d043060_P001 | Maize | nucleus | 13.82 | 16.43 |
| TraesCS2D01G042700.1 | Wheat | nucleus | 14.12 | 16.38 |
| TraesCS3B01G375800.1 | Wheat | nucleus | 12.94 | 16.36 |
| HORVU3Hr1G080980.1 | Barley | nucleus | 11.76 | 16.33 |
| EER94905 | Sorghum | nucleus | 15.59 | 16.16 |
| EER99917 | Sorghum | mitochondrion, nucleus | 16.76 | 16.1 |
| Zm00001d023615_P001 | Maize | plastid | 17.94 | 16.01 |
| Zm00001d023616_P001 | Maize | plastid | 17.94 | 16.01 |
| TraesCS7A01G338500.1 | Wheat | nucleus, plastid | 17.06 | 15.8 |
| Os03t0335200-01 | Rice | nucleus | 14.41 | 15.56 |
| TraesCS2B01G121900.1 | Wheat | nucleus | 17.06 | 15.26 |
| HORVU2Hr1G017740.3 | Barley | nucleus | 15.59 | 15.23 |
| TraesCS2A01G104800.1 | Wheat | nucleus | 15.0 | 14.57 |
| TraesCS2D01G104500.1 | Wheat | nucleus | 15.0 | 14.53 |
| TraesCS2B01G121800.1 | Wheat | nucleus | 14.71 | 14.41 |
| HORVU2Hr1G017720.1 | Barley | nucleus, plastid | 15.59 | 14.4 |
| HORVU7Hr1G075960.1 | Barley | nucleus, plastid | 12.35 | 14.33 |
| Zm00001d012505_P001 | Maize | nucleus | 10.88 | 14.02 |
| HORVU3Hr1G081030.3 | Barley | nucleus | 12.94 | 13.75 |
| CDX80415 | Canola | nucleus | 5.29 | 12.16 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078GAS0 | UniProt:A0A078GAS0 | EnsemblPlants:CDY22474 | ProteinID:CDY22474 |
| ProteinID:CDY22474.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00019025001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR32096 |
| PANTHER:PTHR32096:SF20 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EEDBA9 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaC03g22840DBnaC03g22840D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GAS0]
Coordinates
chrLK032132:-:34377..36201
Molecular Weight (calculated)
38200.8 Da
IEP (calculated)
5.537
GRAVY (calculated)
-0.797
Length
340 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSDSNNTKS VKRNVVDQLV EGYESATQLQ LLLSRQQSSH HIDQTRIVSG DPDPVNKLMG KILDSFHKTI SVLDSFDQVA NVSVVLEGSR NASCGDDSTP
101: VSCNGGDSGD SRKRLGVGKS KRGCYTRKKR SHTWTVEARR IDEDIYAWRK YGQKQILNSK FPRSYFRCTH KPTQGCNATK QVQKHEQDPS LFQITYIGHH
201: TCNVSDETQA KTEPLDLEIV LDSDNNKLAA TISQDHVDPY IQEQGNDISS LIGVGASMVK EEDYNNGDQN KDYCEGSSTY SDLSLVWPDV MMSDDRQHHQ
301: NHFYHGEAST TTSYQFSFID NDQFSSLFDS YCSYEGTSAI
101: VSCNGGDSGD SRKRLGVGKS KRGCYTRKKR SHTWTVEARR IDEDIYAWRK YGQKQILNSK FPRSYFRCTH KPTQGCNATK QVQKHEQDPS LFQITYIGHH
201: TCNVSDETQA KTEPLDLEIV LDSDNNKLAA TISQDHVDPY IQEQGNDISS LIGVGASMVK EEDYNNGDQN KDYCEGSSTY SDLSLVWPDV MMSDDRQHHQ
301: NHFYHGEAST TTSYQFSFID NDQFSSLFDS YCSYEGTSAI
001: MDSNSNNTKS IKRKVVDQLV EGYEFATQLQ LLLSHQHSNQ YHIDETRLVS GSGSVSGGPD PVDELMSKIL GSFHKTISVL DSFDPVAVSV PIAVEGSWNA
101: SCGDDSATPV SCNGGDSGES KKKRLGVGKG KRGCYTRKTR SHTRIVEAKS SEDRYAWRKY GQKEILNTTF PRSYFRCTHK PTQGCKATKQ VQKQDQDSEM
201: FQITYIGYHT CTANDQTHAK TEPFDQEIIM DSEKTLAAST AQNHVNAMVQ EQENNTSSVT AIDAGMVKEE QNNNGDQSKD YYEGSSTGED LSLVWQETMM
301: FDDHQNHYYC GETSTTSHQF GFIDNDDQFS SFFDSYCADY ERTSAM
101: SCGDDSATPV SCNGGDSGES KKKRLGVGKG KRGCYTRKTR SHTRIVEAKS SEDRYAWRKY GQKEILNTTF PRSYFRCTHK PTQGCKATKQ VQKQDQDSEM
201: FQITYIGYHT CTANDQTHAK TEPFDQEIIM DSEKTLAAST AQNHVNAMVQ EQENNTSSVT AIDAGMVKEE QNNNGDQSKD YYEGSSTGED LSLVWQETMM
301: FDDHQNHYYC GETSTTSHQF GFIDNDDQFS SFFDSYCADY ERTSAM
Arabidopsis Description
WRKY54Probable WRKY transcription factor 54 [Source:UniProtKB/Swiss-Prot;Acc:Q93WU8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.