Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY35442 | Canola | nucleus | 95.67 | 95.35 |
| CDY71829 | Canola | nucleus | 67.0 | 79.76 |
| CDY06968 | Canola | nucleus | 41.0 | 79.35 |
| AT2G40740.3 | Thale cress | nucleus | 73.33 | 73.09 |
| CDY59625 | Canola | nucleus | 43.0 | 48.86 |
| CDX75991 | Canola | nucleus | 43.0 | 48.86 |
| CDY13358 | Canola | nucleus | 22.33 | 42.95 |
| KRH64215 | Soybean | nucleus | 39.33 | 35.01 |
| HORVU6Hr1G013890.3 | Barley | nucleus | 25.33 | 34.39 |
| VIT_13s0067g03130.t01 | Wine grape | nucleus | 41.67 | 34.34 |
| KRH53718 | Soybean | nucleus | 37.67 | 34.14 |
| Solyc06g048870.1.1 | Tomato | nucleus, vacuole | 26.67 | 32.92 |
| GSMUA_Achr8P01730_001 | Banana | nucleus | 31.0 | 30.29 |
| GSMUA_Achr9P04830_001 | Banana | nucleus | 18.33 | 30.22 |
| PGSC0003DMT400022638 | Potato | nucleus | 34.33 | 29.68 |
| OQU77713 | Sorghum | nucleus | 32.67 | 25.93 |
| GSMUA_Achr6P32460_001 | Banana | nucleus | 28.0 | 25.77 |
| TraesCS6A01G080500.1 | Wheat | nucleus | 33.0 | 25.32 |
| TraesCS6D01G074200.1 | Wheat | nucleus | 32.67 | 25.13 |
| TraesCS6B01G108000.1 | Wheat | nucleus | 32.67 | 25.0 |
| TraesCS1B01G243100.1 | Wheat | nucleus | 29.33 | 24.51 |
| Os05t0321900-01 | Rice | nucleus | 33.33 | 23.36 |
| CDX83367 | Canola | nucleus | 21.33 | 23.02 |
| Zm00001d037854_P001 | Maize | extracellular | 31.33 | 22.98 |
| CDY42043 | Canola | nucleus | 22.33 | 22.87 |
| CDX80015 | Canola | nucleus | 22.33 | 22.64 |
| CDX95699 | Canola | nucleus | 21.33 | 22.46 |
| CDY03518 | Canola | nucleus | 23.33 | 22.22 |
| CDX72140 | Canola | nucleus | 20.33 | 22.1 |
| CDX89127 | Canola | nucleus | 20.33 | 22.02 |
| CDY47621 | Canola | nucleus | 23.0 | 21.84 |
| CDY27218 | Canola | nucleus | 20.0 | 21.74 |
| CDY10969 | Canola | nucleus | 22.33 | 20.74 |
| CDX94221 | Canola | nucleus | 22.0 | 20.56 |
| CDX80414 | Canola | nucleus | 21.33 | 20.45 |
| CDX75992 | Canola | nucleus | 19.0 | 20.0 |
| CDY66845 | Canola | nucleus | 19.0 | 19.86 |
| CDX67645 | Canola | nucleus | 18.67 | 19.79 |
| CDY19847 | Canola | nucleus | 20.33 | 19.55 |
| CDX87141 | Canola | nucleus | 20.33 | 19.55 |
| CDX88077 | Canola | nucleus | 20.33 | 19.49 |
| CDY65042 | Canola | nucleus | 21.33 | 19.39 |
| CDY32013 | Canola | nucleus | 18.0 | 19.08 |
| CDY25271 | Canola | nucleus | 21.0 | 19.03 |
| CDY23883 | Canola | nucleus | 19.67 | 17.4 |
| CDY06967 | Canola | nucleus | 19.0 | 17.27 |
| CDX79972 | Canola | nucleus | 19.33 | 17.21 |
| CDY14738 | Canola | nucleus | 18.67 | 16.97 |
| CDY35441 | Canola | nucleus | 18.33 | 16.18 |
| CDY22474 | Canola | nucleus | 18.0 | 15.88 |
| CDX80415 | Canola | nucleus | 7.33 | 14.86 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078GCS2 | UniProt:A0A078GCS2 | EnsemblPlants:CDY22473 | ProteinID:CDY22473 |
| ProteinID:CDY22473.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00019024001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31282 |
| PANTHER:PTHR31282:SF38 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EF278C | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaC03g22830DBnaC03g22830D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GCS2]
Coordinates
chrLK032132:+:29109..31068
Molecular Weight (calculated)
33566.5 Da
IEP (calculated)
6.645
GRAVY (calculated)
-0.698
Length
300 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEVMSIIFH GMKLVDELKS SLQEKSPESL STSLDEITKT FDDAKERLKI VLVIRNSETA MNQVKPVISS CSDRMLMQIE PDLMQEYWLR YGGSTSSHGT
101: EVVTQRQLMA VDGDGGRNLT ATERSGGSGS GSSTPRQLRR KNEGEEQTVL VPALRSGNTD LPPDDNHTWR KYGQKEILHS KFPRAYYRCT HQKLYNCPAK
201: KQVQRLNDDP FTFRVTYRGS HTCHIYSTAP TASAAAPTAP ITTTATTSHP VDYGPFFDMA EAMMLGSGGI GDNMDFIFPC NDPPHHHHCY RRQEDGDGDK
101: EVVTQRQLMA VDGDGGRNLT ATERSGGSGS GSSTPRQLRR KNEGEEQTVL VPALRSGNTD LPPDDNHTWR KYGQKEILHS KFPRAYYRCT HQKLYNCPAK
201: KQVQRLNDDP FTFRVTYRGS HTCHIYSTAP TASAAAPTAP ITTTATTSHP VDYGPFFDMA EAMMLGSGGI GDNMDFIFPC NDPPHHHHCY RRQEDGDGDK
001: MYSYKKISYQ MEEVMSMIFH GMKLVKSLES SLPEKPPESL LTSLDEIVKT FSDANERLKM LLEIKNSETA LNKTKPVIVS VANQMLMQME PGLMQEYWLR
101: YGGSTSSQGT EAMFQTQLMA VDGGGERNLT AAVERSGASG SSTPRQRRRK DEGEEQTVLV AALRTGNTDL PPDDNHTWRK YGQKEILGSR FPRAYYRCTH
201: QKLYNCPAKK QVQRLNDDPF TFRVTYRGSH TCYNSTAPTA SSATPSTIPI SSVTTGHSVD YGLAVVDMAD VMFGSGGVGT NMDFIFPKND PS
101: YGGSTSSQGT EAMFQTQLMA VDGGGERNLT AAVERSGASG SSTPRQRRRK DEGEEQTVLV AALRTGNTDL PPDDNHTWRK YGQKEILGSR FPRAYYRCTH
201: QKLYNCPAKK QVQRLNDDPF TFRVTYRGSH TCYNSTAPTA SSATPSTIPI SSVTTGHSVD YGLAVVDMAD VMFGSGGVGT NMDFIFPKND PS
Arabidopsis Description
WRKY55WRKY DNA-binding protein 55 [Source:TAIR;Acc:AT2G40740]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.