Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY06968 | Canola | nucleus | 39.1 | 39.35 |
| CDX75991 | Canola | nucleus | 63.46 | 37.5 |
| CDY59625 | Canola | nucleus | 62.18 | 36.74 |
| HORVU6Hr1G013890.3 | Barley | nucleus | 39.74 | 28.05 |
| Solyc06g048870.1.1 | Tomato | nucleus, vacuole | 42.95 | 27.57 |
| CDY71829 | Canola | nucleus | 44.23 | 27.38 |
| GSMUA_Achr9P04830_001 | Banana | nucleus | 30.77 | 26.37 |
| CDY22473 | Canola | nucleus | 42.95 | 22.33 |
| CDY35442 | Canola | nucleus | 42.31 | 21.93 |
| GSMUA_Achr8P01730_001 | Banana | nucleus | 39.74 | 20.2 |
| PGSC0003DMT400022638 | Potato | nucleus | 44.87 | 20.17 |
| KRH64215 | Soybean | nucleus | 41.67 | 19.29 |
| VIT_13s0067g03130.t01 | Wine grape | nucleus | 43.59 | 18.68 |
| KRH53718 | Soybean | nucleus | 39.1 | 18.43 |
| GSMUA_Achr6P32460_001 | Banana | nucleus | 35.26 | 16.87 |
| TraesCS1B01G243100.1 | Wheat | nucleus | 38.46 | 16.71 |
| TraesCS6B01G108000.1 | Wheat | nucleus | 40.38 | 16.07 |
| TraesCS6D01G074200.1 | Wheat | nucleus | 39.74 | 15.9 |
| TraesCS6A01G080500.1 | Wheat | nucleus | 39.74 | 15.86 |
| CDX83367 | Canola | nucleus | 28.21 | 15.83 |
| CDX95699 | Canola | nucleus | 28.85 | 15.79 |
| CDY42043 | Canola | nucleus | 28.85 | 15.36 |
| OQU77713 | Sorghum | nucleus | 37.18 | 15.34 |
| CDY03518 | Canola | nucleus | 30.13 | 14.92 |
| CDY47621 | Canola | nucleus | 30.13 | 14.87 |
| CDX80015 | Canola | nucleus | 28.21 | 14.86 |
| CDX89127 | Canola | nucleus | 26.28 | 14.8 |
| Os05t0321900-01 | Rice | nucleus | 40.38 | 14.72 |
| CDX94221 | Canola | nucleus | 30.13 | 14.64 |
| CDY10969 | Canola | nucleus | 29.49 | 14.24 |
| Zm00001d037854_P001 | Maize | extracellular | 37.18 | 14.18 |
| CDY27218 | Canola | nucleus | 24.36 | 13.77 |
| CDY32013 | Canola | nucleus | 24.36 | 13.43 |
| CDX67645 | Canola | nucleus | 24.36 | 13.43 |
| CDY65042 | Canola | nucleus | 28.21 | 13.33 |
| CDX72140 | Canola | nucleus | 23.08 | 13.04 |
| CDY25271 | Canola | nucleus | 27.56 | 12.99 |
| CDX75992 | Canola | nucleus | 23.72 | 12.98 |
| CDY66845 | Canola | nucleus | 23.72 | 12.89 |
| CDY14738 | Canola | nucleus | 26.92 | 12.73 |
| CDY06967 | Canola | nucleus | 26.92 | 12.73 |
| CDY35441 | Canola | nucleus | 27.56 | 12.65 |
| CDY22474 | Canola | nucleus | 26.92 | 12.35 |
| CDX79972 | Canola | nucleus | 26.28 | 12.17 |
| CDX88077 | Canola | nucleus | 24.36 | 12.14 |
| CDX80414 | Canola | nucleus | 24.36 | 12.14 |
| CDY23883 | Canola | nucleus | 26.28 | 12.09 |
| CDY19847 | Canola | nucleus | 23.72 | 11.86 |
| CDX87141 | Canola | nucleus | 23.72 | 11.86 |
| CDX80415 | Canola | nucleus | 2.56 | 2.7 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078FM15 | UniProt:A0A078FM15 | EnsemblPlants:CDY13358 | ProteinID:CDY13358 |
| ProteinID:CDY13358.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00071376001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31282 |
| PANTHER:PTHR31282:SF38 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EF0E5D | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaC06g13990DBnaC06g13990D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FM15]
Coordinates
chrLK032034:-:628108..630344
Molecular Weight (calculated)
17968.9 Da
IEP (calculated)
7.924
GRAVY (calculated)
-0.760
Length
156 amino acids
Sequence
(BLAST)
(BLAST)
001: MYRKKDGAVE TVLVVAARMG NMGTPPDDNY VWRKYGQKEI LGSRYPRSYY RCNHQKVYKC PAKKQVQRLD EDPYMLRVTY RSSHTCQFST TSSFSSTATT
101: PVNYGPNVHN MADLMFENTD SVVPFCEPYF NNDSLVPGAA SYEDSWNSTW QSYDMS
101: PVNYGPNVHN MADLMFENTD SVVPFCEPYF NNDSLVPGAA SYEDSWNSTW QSYDMS
001: MYSYKKISYQ MEEVMSMIFH GMKLVKSLES SLPEKPPESL LTSLDEIVKT FSDANERLKM LLEIKNSETA LNKTKPVIVS VANQMLMQME PGLMQEYWLR
101: YGGSTSSQGT EAMFQTQLMA VDGGGERNLT AAVERSGASG SSTPRQRRRK DEGEEQTVLV AALRTGNTDL PPDDNHTWRK YGQKEILGSR FPRAYYRCTH
201: QKLYNCPAKK QVQRLNDDPF TFRVTYRGSH TCYNSTAPTA SSATPSTIPI SSVTTGHSVD YGLAVVDMAD VMFGSGGVGT NMDFIFPKND PS
101: YGGSTSSQGT EAMFQTQLMA VDGGGERNLT AAVERSGASG SSTPRQRRRK DEGEEQTVLV AALRTGNTDL PPDDNHTWRK YGQKEILGSR FPRAYYRCTH
201: QKLYNCPAKK QVQRLNDDPF TFRVTYRGSH TCYNSTAPTA SSATPSTIPI SSVTTGHSVD YGLAVVDMAD VMFGSGGVGT NMDFIFPKND PS
Arabidopsis Description
WRKY55WRKY DNA-binding protein 55 [Source:TAIR;Acc:AT2G40740]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.