Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra009734.1-P | Field mustard | nucleus | 99.68 | 99.68 |
| CDX80414 | Canola | nucleus | 97.12 | 97.12 |
| AT5G24110.1 | Thale cress | nucleus | 75.4 | 77.89 |
| CDX87141 | Canola | nucleus | 77.32 | 77.56 |
| CDY19847 | Canola | nucleus | 76.36 | 76.6 |
| CDX80415 | Canola | nucleus | 34.19 | 72.3 |
| CDX94221 | Canola | nucleus | 33.87 | 33.02 |
| CDY03518 | Canola | nucleus | 32.59 | 32.38 |
| CDY10969 | Canola | nucleus | 32.59 | 31.58 |
| CDY47621 | Canola | nucleus | 31.63 | 31.33 |
| GSMUA_Achr3P15840_001 | Banana | nucleus | 23.96 | 30.12 |
| CDY06968 | Canola | nucleus | 14.38 | 29.03 |
| CDY65042 | Canola | nucleus | 30.03 | 28.48 |
| CDY25271 | Canola | nucleus | 29.71 | 28.1 |
| TraesCS1B01G440700.1 | Wheat | nucleus | 21.41 | 27.8 |
| CDX89127 | Canola | nucleus | 24.6 | 27.8 |
| TraesCS1A01G410700.1 | Wheat | nucleus | 21.41 | 27.13 |
| TraesCS1D01G418600.1 | Wheat | nucleus | 21.41 | 27.13 |
| HORVU2Hr1G029430.2 | Barley | mitochondrion, nucleus | 21.09 | 27.05 |
| TraesCS2B01G187500.1 | Wheat | nucleus | 25.24 | 26.96 |
| TraesCS2D01G168600.1 | Wheat | nucleus | 25.24 | 26.96 |
| GSMUA_Achr1P27980_001 | Banana | nucleus | 26.52 | 26.77 |
| GSMUA_Achr7P14140_001 | Banana | nucleus | 30.67 | 26.67 |
| TraesCS3D01G238300.1 | Wheat | nucleus | 24.6 | 26.46 |
| GSMUA_AchrUn_... | Banana | nucleus | 24.92 | 26.44 |
| TraesCS1D01G418000.1 | Wheat | nucleus | 20.77 | 26.42 |
| Os05t0571200-01 | Rice | nucleus | 23.32 | 26.35 |
| CDX80015 | Canola | nucleus | 24.92 | 26.35 |
| HORVU3Hr1G059210.1 | Barley | nucleus | 20.45 | 26.23 |
| GSMUA_Achr3P25080_001 | Banana | nucleus | 27.8 | 26.2 |
| HORVU5Hr1G034830.3 | Barley | nucleus | 27.8 | 26.2 |
| Zm00001d020136_P001 | Maize | nucleus | 25.24 | 26.16 |
| TraesCS2A01G161500.1 | Wheat | nucleus | 24.6 | 26.01 |
| HORVU1Hr1G090190.2 | Barley | nucleus | 21.09 | 25.98 |
| CDY42043 | Canola | nucleus | 24.28 | 25.94 |
| HORVU1Hr1G090110.1 | Barley | nucleus | 20.77 | 25.69 |
| TraesCS5B01G183700.1 | Wheat | nucleus | 27.8 | 25.66 |
| Zm00001d050247_P001 | Maize | nucleus | 26.2 | 25.62 |
| TraesCS5D01G190700.1 | Wheat | nucleus | 27.8 | 25.51 |
| TraesCS1D01G418400.1 | Wheat | nucleus | 20.77 | 25.49 |
| Solyc05g050310.1.1 | Tomato | cytosol, nucleus | 4.79 | 25.42 |
| TraesCS5A01G185600.1 | Wheat | nucleus | 27.8 | 25.36 |
| TraesCS1B01G440600.1 | Wheat | nucleus | 19.17 | 25.21 |
| TraesCS1D01G418500.1 | Wheat | nucleus | 19.49 | 25.21 |
| EER96589 | Sorghum | nucleus | 24.92 | 25.16 |
| HORVU3Hr1G059220.1 | Barley | nucleus | 24.6 | 25.0 |
| CDX95699 | Canola | nucleus | 22.68 | 24.91 |
| TraesCS1B01G440300.1 | Wheat | nucleus | 19.49 | 24.9 |
| CDX83367 | Canola | nucleus | 22.04 | 24.82 |
| HORVU1Hr1G090170.1 | Barley | nucleus | 19.49 | 24.7 |
| EER96590 | Sorghum | nucleus | 25.88 | 24.7 |
| EES18716 | Sorghum | nucleus | 21.41 | 24.63 |
| TraesCS1B01G440500.1 | Wheat | nucleus | 20.45 | 24.52 |
| TraesCS1A01G410500.1 | Wheat | nucleus | 19.81 | 24.51 |
| TraesCS5D01G190800.1 | Wheat | nucleus | 27.48 | 24.5 |
| HORVU3Hr1G058670.1 | Barley | nucleus | 19.49 | 24.5 |
| Os11t0685700-00 | Rice | nucleus | 15.02 | 24.48 |
| Os01t0656400-00 | Rice | nucleus | 21.41 | 24.45 |
| CDY13358 | Canola | nucleus | 12.14 | 24.36 |
| TraesCS5B01G183800.1 | Wheat | nucleus | 26.84 | 24.28 |
| Os08t0386200-01 | Rice | nucleus | 24.6 | 24.14 |
| GSMUA_Achr6P05710_001 | Banana | nucleus | 26.2 | 24.12 |
| OQU80381 | Sorghum | nucleus | 26.2 | 24.12 |
| Zm00001d032265_P001 | Maize | nucleus | 25.56 | 24.02 |
| HORVU1Hr1G090130.4 | Barley | nucleus | 19.81 | 23.85 |
| TraesCS7D01G110600.1 | Wheat | nucleus | 27.8 | 23.64 |
| Zm00001d020137_P001 | Maize | nucleus | 24.28 | 23.46 |
| TraesCS7A01G116000.1 | Wheat | nucleus | 28.11 | 23.34 |
| Zm00001d005622_P001 | Maize | nucleus | 24.6 | 23.26 |
| Zm00001d011496_P002 | Maize | nucleus | 24.28 | 23.24 |
| TraesCS5A01G185700.1 | Wheat | nucleus | 25.88 | 23.21 |
| EES03370 | Sorghum | nucleus | 25.56 | 23.12 |
| Solyc05g050330.2.1 | Tomato | nucleus | 17.89 | 22.95 |
| TraesCS7B01G012600.1 | Wheat | nucleus | 27.16 | 22.91 |
| Os06t0158100-00 | Rice | nucleus | 28.43 | 22.76 |
| GSMUA_Achr4P15640_001 | Banana | nucleus | 25.24 | 22.64 |
| EER87882 | Sorghum | nucleus | 27.16 | 22.49 |
| Os09t0334500-01 | Rice | nucleus | 25.88 | 22.44 |
| TraesCS1A01G410600.1 | Wheat | nucleus | 16.61 | 22.32 |
| HORVU5Hr1G056130.2 | Barley | nucleus | 27.8 | 22.19 |
| PGSC0003DMT400046351 | Potato | nucleus | 21.09 | 21.93 |
| Zm00001d045283_P001 | Maize | nucleus | 27.48 | 21.72 |
| HORVU0Hr1G012740.1 | Barley | nucleus | 22.36 | 21.67 |
| GSMUA_Achr10P... | Banana | extracellular, nucleus | 21.41 | 21.61 |
| CDX75991 | Canola | nucleus | 18.21 | 21.59 |
| CDY59625 | Canola | nucleus | 18.21 | 21.59 |
| Zm00001d036244_P001 | Maize | nucleus | 25.24 | 21.58 |
| Zm00001d009619_P002 | Maize | nucleus | 20.45 | 21.55 |
| Zm00001d044010_P001 | Maize | nucleus | 22.68 | 21.19 |
| CDX72140 | Canola | nucleus | 18.53 | 21.01 |
| CDY27218 | Canola | nucleus | 18.53 | 21.01 |
| CDY32013 | Canola | nucleus | 18.85 | 20.85 |
| CDY71829 | Canola | nucleus | 16.61 | 20.63 |
| CDX67645 | Canola | nucleus | 18.53 | 20.49 |
| CDY22473 | Canola | nucleus | 19.49 | 20.33 |
| HORVU0Hr1G012750.1 | Barley | nucleus | 21.41 | 20.18 |
| CDY35442 | Canola | nucleus | 19.17 | 19.93 |
| PGSC0003DMT400084214 | Potato | nucleus | 20.77 | 19.64 |
| PGSC0003DMT400084227 | Potato | nucleus | 17.89 | 19.05 |
| Solyc05g050340.2.1 | Tomato | nucleus | 19.81 | 18.96 |
| CDX75992 | Canola | nucleus | 17.25 | 18.95 |
| CDY66845 | Canola | nucleus | 17.25 | 18.82 |
| Solyc05g050300.1.1 | Tomato | nucleus | 11.5 | 18.46 |
| CDY22474 | Canola | nucleus | 19.17 | 17.65 |
| CDY35441 | Canola | nucleus | 18.85 | 17.35 |
| CDY06967 | Canola | nucleus | 18.21 | 17.27 |
| CDY14738 | Canola | nucleus | 18.21 | 17.27 |
| CDY23883 | Canola | nucleus | 17.57 | 16.22 |
| CDX79972 | Canola | nucleus | 16.93 | 15.73 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078DGL0 | EnsemblPlants:CDX88077 | ProteinID:CDX88077 | ProteinID:CDX88077.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00147500001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR32096 |
| PANTHER:PTHR32096:SF34 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EEF729 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaA06g26680D
Coordinates
chrLK031854:-:454363..455724
Molecular Weight (calculated)
35519.1 Da
IEP (calculated)
6.800
GRAVY (calculated)
-0.959
Length
313 amino acids
Sequence
(BLAST)
(BLAST)
001: MERKSNSGEW EKMKKEISEL MTEGRDYAHE LKFQLGSSSS DQESREHLAK KILESYHKSL TIMNHPAELD QVSPHIHGGG SPKSDDSDQE PHQNIKSSKK
101: SMPRWTEKVR ITPGAEIDRT LDDGFSWRKY GQKDILGAKF PRGYYRCTYR KSQRCEATKQ VQRSNENHQM LFEISYRGIH SCSQAANVRS AIPVRVLEPT
201: QPQEHENLEM VKESLDAGHH NYNHQAHLHQ TLQYHLSSTP TLESNNMMLQ LADQNIDLFG STSFSSDLGA NVNYDYLASH SVGSVSHSTS NSPSESPFES
301: FDPNNPFKGF GGF
101: SMPRWTEKVR ITPGAEIDRT LDDGFSWRKY GQKDILGAKF PRGYYRCTYR KSQRCEATKQ VQRSNENHQM LFEISYRGIH SCSQAANVRS AIPVRVLEPT
201: QPQEHENLEM VKESLDAGHH NYNHQAHLHQ TLQYHLSSTP TLESNNMMLQ LADQNIDLFG STSFSSDLGA NVNYDYLASH SVGSVSHSTS NSPSESPFES
301: FDPNNPFKGF GGF
001: MEKNHSSGEW EKMKNEINEL MIEGRDYAHQ FGSASSQETR EHLAKKILQS YHKSLTIMNY SGELDQVSQG GGSPKSDDSD QEPLVIKSSK KSMPRWSSKV
101: RIAPGAGVDR TLDDGFSWRK YGQKDILGAK FPRGYYRCTY RKSQGCEATK QVQRSDENQM LLEISYRGIH SCSQAANVGT TMPIQNLEPN QTQEHGNLDM
201: VKESVDNYNH QAHLHHNLHY PLSSTPNLEN NNAYMLQMRD QNIEYFGSTS FSSDLGTSIN YNFPASGSAS HSASNSPSTV PLESPFESYD PNHPYGGFGG
301: FYS
101: RIAPGAGVDR TLDDGFSWRK YGQKDILGAK FPRGYYRCTY RKSQGCEATK QVQRSDENQM LLEISYRGIH SCSQAANVGT TMPIQNLEPN QTQEHGNLDM
201: VKESVDNYNH QAHLHHNLHY PLSSTPNLEN NNAYMLQMRD QNIEYFGSTS FSSDLGTSIN YNFPASGSAS HSASNSPSTV PLESPFESYD PNHPYGGFGG
301: FYS
Arabidopsis Description
WRKY30Probable WRKY transcription factor 30 [Source:UniProtKB/Swiss-Prot;Acc:Q9FL62]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.