Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G440500.1 | Wheat | nucleus | 84.23 | 83.91 |
| TraesCS1D01G418400.1 | Wheat | nucleus | 80.38 | 81.96 |
| HORVU1Hr1G090110.1 | Barley | nucleus | 78.08 | 80.24 |
| HORVU1Hr1G090190.2 | Barley | nucleus | 76.15 | 77.95 |
| HORVU1Hr1G090170.1 | Barley | nucleus | 70.0 | 73.68 |
| Os05t0571200-01 | Rice | nucleus | 53.85 | 50.54 |
| EES18716 | Sorghum | nucleus | 47.31 | 45.22 |
| Zm00001d009619_P002 | Maize | nucleus | 46.15 | 40.4 |
| HORVU3Hr1G059210.1 | Barley | nucleus | 36.54 | 38.93 |
| HORVU3Hr1G059220.1 | Barley | nucleus | 44.23 | 37.34 |
| HORVU4Hr1G051970.1 | Barley | nucleus | 13.46 | 28.0 |
| GSMUA_Achr3P15840_001 | Banana | nucleus | 25.0 | 26.1 |
| HORVU2Hr1G029430.2 | Barley | mitochondrion, nucleus | 23.85 | 25.41 |
| VIT_15s0046g01140.t01 | Wine grape | nucleus | 31.54 | 25.39 |
| GSMUA_Achr3P25080_001 | Banana | nucleus | 31.92 | 25.0 |
| Solyc10g009550.2.1 | Tomato | nucleus | 26.54 | 23.79 |
| HORVU5Hr1G034830.3 | Barley | nucleus | 30.0 | 23.49 |
| PGSC0003DMT400051194 | Potato | nucleus | 25.77 | 23.1 |
| Bra013732.1-P | Field mustard | nucleus | 28.08 | 23.1 |
| CDY47621 | Canola | nucleus | 28.08 | 23.1 |
| CDY03518 | Canola | nucleus | 27.69 | 22.86 |
| HORVU0Hr1G012740.1 | Barley | nucleus | 28.08 | 22.6 |
| Bra019265.1-P | Field mustard | nucleus | 28.08 | 22.6 |
| CDX94221 | Canola | nucleus | 27.69 | 22.43 |
| CDY10969 | Canola | nucleus | 27.69 | 22.29 |
| AT4G23810.1 | Thale cress | nucleus | 27.69 | 22.22 |
| Bra000423.1-P | Field mustard | nucleus | 23.85 | 22.06 |
| CDX83367 | Canola | nucleus | 23.46 | 21.94 |
| Solyc05g050330.2.1 | Tomato | nucleus | 20.38 | 21.72 |
| HORVU5Hr1G056130.2 | Barley | nucleus | 32.69 | 21.68 |
| Solyc05g050300.1.1 | Tomato | nucleus | 16.15 | 21.54 |
| Solyc03g007380.1.1 | Tomato | nucleus | 29.23 | 21.53 |
| CDY65042 | Canola | nucleus | 27.31 | 21.52 |
| CDY25271 | Canola | nucleus | 27.31 | 21.45 |
| Bra033158.1-P | Field mustard | nucleus | 27.31 | 21.45 |
| KRH77637 | Soybean | nucleus | 26.54 | 21.43 |
| VIT_16s0050g02510.t01 | Wine grape | nucleus | 30.0 | 21.43 |
| AT4G11070.1 | Thale cress | nucleus | 25.77 | 21.41 |
| AT2G46400.1 | Thale cress | nucleus | 24.23 | 21.36 |
| PGSC0003DMT400031695 | Potato | nucleus | 27.69 | 21.24 |
| Solyc08g082110.2.1 | Tomato | nucleus | 27.69 | 21.24 |
| KRH41300 | Soybean | nucleus | 29.23 | 21.17 |
| CDX87141 | Canola | nucleus | 25.38 | 21.15 |
| CDX95699 | Canola | nucleus | 23.08 | 21.05 |
| HORVU3Hr1G058670.1 | Barley | nucleus | 20.0 | 20.88 |
| Bra026467.1-P | Field mustard | nucleus | 25.0 | 20.83 |
| PGSC0003DMT400023502 | Potato | nucleus | 28.46 | 20.79 |
| KRH68901 | Soybean | nucleus | 28.85 | 20.72 |
| KRH60029 | Soybean | nucleus | 28.85 | 20.66 |
| CDY19847 | Canola | nucleus | 24.62 | 20.51 |
| CDY42043 | Canola | nucleus | 23.08 | 20.48 |
| VIT_02s0025g01280.t01 | Wine grape | nucleus | 26.92 | 20.47 |
| Bra004540.1-P | Field mustard | nucleus | 22.31 | 20.35 |
| KRH64503 | Soybean | nucleus | 28.46 | 20.33 |
| CDX80015 | Canola | nucleus | 23.08 | 20.27 |
| Solyc01g095630.2.1 | Tomato | nucleus | 26.15 | 20.24 |
| KRG97154 | Soybean | nucleus | 28.08 | 20.17 |
| CDX80414 | Canola | nucleus | 24.23 | 20.13 |
| KRH53440 | Soybean | nucleus | 28.08 | 20.05 |
| PGSC0003DMT400000599 | Potato | nucleus | 26.54 | 19.94 |
| CDX88077 | Canola | nucleus | 23.85 | 19.81 |
| Bra009734.1-P | Field mustard | nucleus | 23.85 | 19.81 |
| AT5G24110.1 | Thale cress | nucleus | 23.08 | 19.8 |
| KRH06499 | Soybean | nucleus | 28.08 | 19.57 |
| HORVU6Hr1G013890.3 | Barley | nucleus | 16.54 | 19.46 |
| HORVU4Hr1G052010.2 | Barley | nucleus | 15.38 | 19.42 |
| PGSC0003DMT400084227 | Potato | nucleus | 21.92 | 19.39 |
| HORVU0Hr1G012750.1 | Barley | nucleus | 24.62 | 19.28 |
| PGSC0003DMT400046351 | Potato | nucleus | 22.31 | 19.27 |
| KRH47935 | Soybean | nucleus | 27.31 | 19.24 |
| HORVU3Hr1G080980.1 | Barley | nucleus | 18.08 | 19.18 |
| Bra014426.1-P | Field mustard | nucleus | 20.38 | 19.13 |
| CDX89127 | Canola | nucleus | 20.38 | 19.13 |
| HORVU1Hr1G069620.7 | Barley | nucleus | 21.92 | 19.0 |
| PGSC0003DMT400014949 | Potato | nucleus | 25.0 | 18.06 |
| HORVU0Hr1G030830.1 | Barley | nucleus, plastid | 19.23 | 17.86 |
| Solyc08g008280.2.1 | Tomato | nucleus | 24.62 | 17.78 |
| Solyc05g050340.2.1 | Tomato | nucleus | 22.31 | 17.74 |
| HORVU3Hr1G080860.1 | Barley | nucleus | 17.31 | 17.58 |
| PGSC0003DMT400084214 | Potato | nucleus | 21.92 | 17.22 |
| HORVU2Hr1G006600.1 | Barley | nucleus | 21.15 | 17.13 |
| HORVU4Hr1G050320.2 | Barley | nucleus | 19.62 | 17.11 |
| Solyc05g050310.1.1 | Tomato | cytosol, nucleus | 3.85 | 16.95 |
| HORVU3Hr1G081030.3 | Barley | nucleus | 20.0 | 16.25 |
| HORVU3Hr1G081000.3 | Barley | plastid | 12.31 | 16.16 |
| HORVU2Hr1G109330.1 | Barley | mitochondrion, nucleus, vacuole | 20.0 | 16.0 |
| HORVU7Hr1G083270.2 | Barley | nucleus | 18.85 | 15.91 |
| HORVU2Hr1G017740.3 | Barley | nucleus | 21.15 | 15.8 |
| HORVU7Hr1G075960.1 | Barley | nucleus, plastid | 17.69 | 15.7 |
| HORVU2Hr1G017720.1 | Barley | nucleus, plastid | 21.54 | 15.22 |
| HORVU4Hr1G022970.2 | Barley | nucleus, plastid | 16.15 | 15.05 |
| HORVU1Hr1G069640.2 | Barley | nucleus | 16.54 | 14.68 |
| HORVU1Hr1G069610.1 | Barley | nucleus | 16.15 | 14.53 |
| HORVU3Hr1G080890.1 | Barley | nucleus, plastid, vacuole | 16.15 | 14.29 |
| HORVU0Hr1G023420.1 | Barley | nucleus, plastid | 16.15 | 13.46 |
| HORVU3Hr1G080960.1 | Barley | nucleus | 17.31 | 12.5 |
| CDX80415 | Canola | nucleus | 6.54 | 11.49 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | UniProt:A0A287GNQ2 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:HORVU1Hr1G090130 | EnsemblPlants:HORVU1Hr1G090130.4 | InterPro:IPR003657 |
| InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR32096 | PANTHER:PTHR32096:SF20 | SMART:SM00774 |
| SUPFAM:SSF118290 | UniParc:UPI000B480266 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : |
Description
No Description!
Coordinates
chrchr1H:-:545428494..545429775
Molecular Weight (calculated)
27761.4 Da
IEP (calculated)
4.956
GRAVY (calculated)
-0.395
Length
260 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDTATAATL ATELDGLLAM ARELEARVDG DQGAPGAARE LCAALAESVD RAMRLAGSSE GEGEGNATGR ASVSGQVRGG RKSAANKVRT QVRVASVTDV
101: GPLNDGLSWR KYGQKDILGA TYPRAYFRCT HRHTQGCRAT KQVQRAHADP LLFDVLYLGA HTCAQAAAVL ASLEHQPPAA FGLEQQQQQS SSPEGIQWPV
201: ESLTPPSFPS SPAGCYTPGN PWCQLAGSHG YADMAYEYDP QFDELLLNLS EVFQPEVQNL
101: GPLNDGLSWR KYGQKDILGA TYPRAYFRCT HRHTQGCRAT KQVQRAHADP LLFDVLYLGA HTCAQAAAVL ASLEHQPPAA FGLEQQQQQS SSPEGIQWPV
201: ESLTPPSFPS SPAGCYTPGN PWCQLAGSHG YADMAYEYDP QFDELLLNLS EVFQPEVQNL
001: MDTNKAKKLK VMNQLVEGHD LTTQLQQLLS QPGSGLEDLV AKILVCFNNT ISVLDTFEPI SSSSSLAAVE GSQNASCDND GKFEDSGDSR KRLGPVKGKR
101: GCYKRKKRSE TCTIESTILE DAFSWRKYGQ KEILNAKFPR SYFRCTHKYT QGCKATKQVQ KVELEPKMFS ITYIGNHTCN TNAETPKSKT CDHHDEIFMD
201: SEDHKSPSLS TSMKEEDNPH RHHGSSTEND LSLVWPEMVF EEDYHHQASY VNGKTSTSID VLGSQDLMVF GGGGDFEFSE NEHFSIFSSC SNLS
101: GCYKRKKRSE TCTIESTILE DAFSWRKYGQ KEILNAKFPR SYFRCTHKYT QGCKATKQVQ KVELEPKMFS ITYIGNHTCN TNAETPKSKT CDHHDEIFMD
201: SEDHKSPSLS TSMKEEDNPH RHHGSSTEND LSLVWPEMVF EEDYHHQASY VNGKTSTSID VLGSQDLMVF GGGGDFEFSE NEHFSIFSSC SNLS
Arabidopsis Description
WRKY70Probable WRKY transcription factor 70 [Source:UniProtKB/Swiss-Prot;Acc:Q9LY00]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.