Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY03518 | Canola | nucleus | 75.0 | 77.14 |
| Bra013732.1-P | Field mustard | nucleus | 74.69 | 76.58 |
| CDY47621 | Canola | nucleus | 74.38 | 76.27 |
| Bra019265.1-P | Field mustard | nucleus | 75.31 | 75.54 |
| CDY10969 | Canola | nucleus | 74.38 | 74.61 |
| CDX94221 | Canola | nucleus | 73.46 | 74.14 |
| AT4G11070.1 | Thale cress | nucleus | 54.32 | 56.23 |
| KRH41300 | Soybean | nucleus | 43.52 | 39.28 |
| KRH60029 | Soybean | nucleus | 43.21 | 38.57 |
| PGSC0003DMT400014949 | Potato | nucleus | 41.36 | 37.22 |
| VIT_02s0025g01280.t01 | Wine grape | nucleus | 39.2 | 37.13 |
| Solyc08g008280.2.1 | Tomato | nucleus | 40.74 | 36.67 |
| KRH77637 | Soybean | nucleus | 35.19 | 35.4 |
| Solyc08g082110.2.1 | Tomato | nucleus | 37.04 | 35.4 |
| PGSC0003DMT400031695 | Potato | nucleus | 36.73 | 35.1 |
| HORVU3Hr1G059210.1 | Barley | nucleus | 26.23 | 34.84 |
| AT5G24110.1 | Thale cress | nucleus | 32.1 | 34.32 |
| TraesCS3D01G238300.1 | Wheat | nucleus | 29.94 | 33.33 |
| GSMUA_Achr3P15840_001 | Banana | nucleus | 25.31 | 32.93 |
| GSMUA_Achr1P27980_001 | Banana | nucleus | 30.86 | 32.26 |
| GSMUA_AchrUn_... | Banana | nucleus | 29.32 | 32.2 |
| HORVU3Hr1G059220.1 | Barley | nucleus | 29.94 | 31.49 |
| GSMUA_Achr7P14140_001 | Banana | nucleus | 34.88 | 31.39 |
| GSMUA_Achr3P25080_001 | Banana | nucleus | 32.1 | 31.33 |
| TraesCS1B01G440700.1 | Wheat | nucleus | 23.15 | 31.12 |
| TraesCS2B01G187500.1 | Wheat | nucleus | 28.09 | 31.06 |
| Os11t0685700-00 | Rice | nucleus | 18.21 | 30.73 |
| TraesCS2D01G168600.1 | Wheat | nucleus | 27.78 | 30.72 |
| Zm00001d050247_P001 | Maize | nucleus | 30.25 | 30.62 |
| Os08t0386200-01 | Rice | nucleus | 29.94 | 30.41 |
| Os05t0571200-01 | Rice | nucleus | 25.93 | 30.32 |
| GSMUA_Achr6P05710_001 | Banana | nucleus | 31.79 | 30.29 |
| Os01t0656400-00 | Rice | nucleus | 25.62 | 30.29 |
| Zm00001d020136_P001 | Maize | nucleus | 28.09 | 30.13 |
| TraesCS1D01G418600.1 | Wheat | nucleus | 22.84 | 29.96 |
| HORVU2Hr1G029430.2 | Barley | mitochondrion, nucleus | 22.53 | 29.92 |
| TraesCS1B01G440600.1 | Wheat | nucleus | 21.91 | 29.83 |
| TraesCS1D01G418500.1 | Wheat | nucleus | 22.22 | 29.75 |
| TraesCS2A01G161500.1 | Wheat | nucleus | 27.16 | 29.73 |
| HORVU1Hr1G090110.1 | Barley | nucleus | 23.15 | 29.64 |
| HORVU1Hr1G090190.2 | Barley | nucleus | 23.15 | 29.53 |
| Zm00001d032265_P001 | Maize | nucleus | 30.25 | 29.43 |
| EER96589 | Sorghum | nucleus | 28.09 | 29.35 |
| TraesCS1D01G418000.1 | Wheat | nucleus | 22.22 | 29.27 |
| HORVU1Hr1G090170.1 | Barley | nucleus | 22.22 | 29.15 |
| OQU80381 | Sorghum | nucleus | 30.25 | 28.82 |
| TraesCS1A01G410700.1 | Wheat | nucleus | 21.91 | 28.74 |
| HORVU5Hr1G034830.3 | Barley | nucleus | 29.32 | 28.61 |
| TraesCS1A01G410500.1 | Wheat | nucleus | 22.22 | 28.46 |
| TraesCS5D01G190700.1 | Wheat | nucleus | 29.94 | 28.45 |
| Zm00001d011496_P002 | Maize | nucleus | 28.7 | 28.44 |
| TraesCS5B01G183700.1 | Wheat | nucleus | 29.63 | 28.32 |
| EES18716 | Sorghum | nucleus | 23.77 | 28.31 |
| TraesCS1D01G418400.1 | Wheat | nucleus | 22.22 | 28.24 |
| TraesCS1B01G440300.1 | Wheat | nucleus | 21.3 | 28.16 |
| TraesCS1B01G440500.1 | Wheat | nucleus | 22.53 | 27.97 |
| Zm00001d020137_P001 | Maize | nucleus | 27.78 | 27.78 |
| TraesCS5B01G183800.1 | Wheat | nucleus | 29.63 | 27.75 |
| HORVU1Hr1G090130.4 | Barley | nucleus | 22.22 | 27.69 |
| TraesCS5D01G190800.1 | Wheat | nucleus | 29.94 | 27.64 |
| EES03370 | Sorghum | nucleus | 29.32 | 27.46 |
| EER96590 | Sorghum | nucleus | 27.78 | 27.44 |
| TraesCS5A01G185700.1 | Wheat | nucleus | 29.32 | 27.22 |
| Zm00001d005622_P001 | Maize | nucleus | 27.78 | 27.19 |
| TraesCS7D01G110600.1 | Wheat | nucleus | 30.86 | 27.17 |
| AT2G46400.1 | Thale cress | nucleus | 24.69 | 27.12 |
| TraesCS5A01G185600.1 | Wheat | nucleus | 28.7 | 27.11 |
| TraesCS1A01G410600.1 | Wheat | nucleus | 19.44 | 27.04 |
| GSMUA_Achr10P... | Banana | extracellular, nucleus | 25.62 | 26.77 |
| Zm00001d045283_P001 | Maize | nucleus | 32.72 | 26.77 |
| EER87882 | Sorghum | nucleus | 31.17 | 26.72 |
| TraesCS7B01G012600.1 | Wheat | nucleus | 30.56 | 26.68 |
| Zm00001d044010_P001 | Maize | nucleus | 27.47 | 26.57 |
| Os09t0334500-01 | Rice | nucleus | 29.32 | 26.32 |
| TraesCS7A01G116000.1 | Wheat | nucleus | 30.56 | 26.26 |
| Os06t0158100-00 | Rice | nucleus | 31.48 | 26.09 |
| HORVU0Hr1G012740.1 | Barley | nucleus | 25.93 | 26.01 |
| Zm00001d036244_P001 | Maize | nucleus | 29.32 | 25.96 |
| GSMUA_Achr4P15640_001 | Banana | nucleus | 27.78 | 25.79 |
| HORVU3Hr1G058670.1 | Barley | nucleus | 19.75 | 25.7 |
| HORVU5Hr1G056130.2 | Barley | nucleus | 29.32 | 24.23 |
| AT2G40740.3 | Thale cress | nucleus | 21.3 | 22.92 |
| Zm00001d009619_P002 | Maize | nucleus | 20.99 | 22.9 |
| HORVU0Hr1G012750.1 | Barley | nucleus | 21.91 | 21.39 |
| AT3G56400.1 | Thale cress | nucleus | 18.21 | 20.07 |
| AT2G40750.1 | Thale cress | nucleus | 17.59 | 16.47 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | EntrezGene:828481 | UniProt:A0A178UV74 | ProteinID:AEE84809.1 | EMBL:AF272748 |
| EMBL:AF370614 | EMBL:AK227938 | ArrayExpress:AT4G23810 | EnsemblPlantsGene:AT4G23810 | RefSeq:AT4G23810 | TAIR:AT4G23810 |
| RefSeq:AT4G23810-TAIR-G | EnsemblPlants:AT4G23810.1 | TAIR:AT4G23810.1 | Unigene:At.2572 | EMBL:BT033113 | ProteinID:CAA23047.1 |
| ProteinID:CAB81299.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006950 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009605 | GO:GO:0009607 |
| GO:GO:0009719 | GO:GO:0009751 | GO:GO:0009816 | GO:GO:0009987 | GO:GO:0010150 | GO:GO:0010193 |
| GO:GO:0010200 | GO:GO:0031347 | GO:GO:0042542 | GO:GO:0043565 | GO:GO:0045893 | InterPro:IPR003657 |
| InterPro:IPR036576 | RefSeq:NP_194112.1 | ProteinID:OAO96621.1 | PFAM:PF03106 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025034 | PFscan:PS50811 | PANTHER:PTHR32096 | PANTHER:PTHR32096:SF36 | UniProt:Q9SUP6 |
| SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI00000A6C95 | Symbol:WRKY53 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
WRKY53Probable WRKY transcription factor 53 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUP6]
Coordinates
chr4:-:12392370..12393982
Molecular Weight (calculated)
36274.4 Da
IEP (calculated)
6.797
GRAVY (calculated)
-0.602
Length
324 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGRDMLSWE QKTLLSELIN GFDAAKKLQA RLREAPSPSS SFSSPATAVA ETNEILVKQI VSSYERSLLL LNWSSSPSVQ LIPTPVTVVP VANPGSVPES
101: PASINGSPRS EEFADGGGSS ESHHRQDYIF NSKKRKMLPK WSEKVRISPE RGLEGPQDDV FSWRKYGQKD ILGAKFPRSY YRCTHRSTQN CWATKQVQRS
201: DGDATVFEVT YRGTHTCSQA ITRTPPLASP EKRQDTRVKP AITQKPKDIL ESLKSNLTVR TDGLDDGKDV FSFPDTPPFY NYGTINGEFG HVESSPIFDV
301: VDWFNPTVEI DTTFPAFLHE SIYY
101: PASINGSPRS EEFADGGGSS ESHHRQDYIF NSKKRKMLPK WSEKVRISPE RGLEGPQDDV FSWRKYGQKD ILGAKFPRSY YRCTHRSTQN CWATKQVQRS
201: DGDATVFEVT YRGTHTCSQA ITRTPPLASP EKRQDTRVKP AITQKPKDIL ESLKSNLTVR TDGLDDGKDV FSFPDTPPFY NYGTINGEFG HVESSPIFDV
301: VDWFNPTVEI DTTFPAFLHE SIYY
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.