Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra033158.1-P | Field mustard | nucleus | 72.2 | 68.28 |
| CDY25271 | Canola | nucleus | 72.2 | 68.28 |
| CDY65042 | Canola | nucleus | 71.89 | 68.18 |
| AT4G23810.1 | Thale cress | nucleus | 56.23 | 54.32 |
| KRH41300 | Soybean | nucleus | 43.13 | 37.6 |
| PGSC0003DMT400014949 | Potato | nucleus | 43.13 | 37.5 |
| PGSC0003DMT400031695 | Potato | nucleus | 40.58 | 37.46 |
| Solyc08g082110.2.1 | Tomato | nucleus | 40.58 | 37.46 |
| Solyc08g008280.2.1 | Tomato | nucleus | 42.49 | 36.94 |
| KRH60029 | Soybean | nucleus | 42.81 | 36.91 |
| VIT_02s0025g01280.t01 | Wine grape | nucleus | 39.3 | 35.96 |
| KRH77637 | Soybean | nucleus | 36.1 | 35.09 |
| GSMUA_Achr3P15840_001 | Banana | nucleus | 27.16 | 34.14 |
| GSMUA_Achr1P27980_001 | Banana | nucleus | 32.91 | 33.23 |
| GSMUA_Achr7P14140_001 | Banana | nucleus | 38.02 | 33.06 |
| Os11t0685700-00 | Rice | nucleus | 20.13 | 32.81 |
| GSMUA_Achr6P05710_001 | Banana | nucleus | 35.46 | 32.65 |
| GSMUA_AchrUn_... | Banana | nucleus | 30.67 | 32.54 |
| HORVU3Hr1G059210.1 | Barley | nucleus | 24.92 | 31.97 |
| GSMUA_Achr3P25080_001 | Banana | nucleus | 32.91 | 31.02 |
| TraesCS3D01G238300.1 | Wheat | nucleus | 28.75 | 30.93 |
| AT5G24110.1 | Thale cress | nucleus | 29.07 | 30.03 |
| HORVU3Hr1G059220.1 | Barley | nucleus | 29.39 | 29.87 |
| TraesCS2B01G187500.1 | Wheat | nucleus | 27.8 | 29.69 |
| TraesCS2D01G168600.1 | Wheat | nucleus | 27.8 | 29.69 |
| TraesCS1B01G440600.1 | Wheat | nucleus | 22.36 | 29.41 |
| TraesCS1D01G418500.1 | Wheat | nucleus | 22.68 | 29.34 |
| TraesCS1B01G440700.1 | Wheat | nucleus | 22.36 | 29.05 |
| HORVU5Hr1G034830.3 | Barley | nucleus | 30.67 | 28.92 |
| Os05t0571200-01 | Rice | nucleus | 25.56 | 28.88 |
| Zm00001d050247_P001 | Maize | nucleus | 29.39 | 28.75 |
| OQU80381 | Sorghum | nucleus | 30.99 | 28.53 |
| Os01t0656400-00 | Rice | nucleus | 24.92 | 28.47 |
| TraesCS2A01G161500.1 | Wheat | nucleus | 26.84 | 28.38 |
| HORVU1Hr1G090170.1 | Barley | nucleus | 22.36 | 28.34 |
| TraesCS1D01G418600.1 | Wheat | nucleus | 22.36 | 28.34 |
| Zm00001d032265_P001 | Maize | nucleus | 29.71 | 27.93 |
| HORVU2Hr1G029430.2 | Barley | mitochondrion, nucleus | 21.73 | 27.87 |
| HORVU1Hr1G090110.1 | Barley | nucleus | 22.36 | 27.67 |
| TraesCS1D01G418000.1 | Wheat | nucleus | 21.73 | 27.64 |
| Os08t0386200-01 | Rice | nucleus | 28.11 | 27.59 |
| Zm00001d020136_P001 | Maize | nucleus | 26.52 | 27.48 |
| TraesCS5B01G183800.1 | Wheat | nucleus | 30.35 | 27.46 |
| GSMUA_Achr10P... | Banana | extracellular, nucleus | 27.16 | 27.42 |
| TraesCS1B01G440300.1 | Wheat | nucleus | 21.41 | 27.35 |
| EES18716 | Sorghum | nucleus | 23.64 | 27.21 |
| EES03370 | Sorghum | nucleus | 30.03 | 27.17 |
| HORVU1Hr1G090190.2 | Barley | nucleus | 22.04 | 27.17 |
| TraesCS1A01G410700.1 | Wheat | nucleus | 21.41 | 27.13 |
| TraesCS5A01G185600.1 | Wheat | nucleus | 29.71 | 27.11 |
| EER96589 | Sorghum | nucleus | 26.84 | 27.1 |
| TraesCS1D01G418400.1 | Wheat | nucleus | 22.04 | 27.06 |
| GSMUA_Achr4P15640_001 | Banana | nucleus | 30.03 | 26.93 |
| HORVU3Hr1G058670.1 | Barley | nucleus | 21.41 | 26.91 |
| TraesCS1A01G410500.1 | Wheat | nucleus | 21.73 | 26.88 |
| TraesCS5B01G183700.1 | Wheat | nucleus | 29.07 | 26.84 |
| TraesCS5D01G190800.1 | Wheat | nucleus | 30.03 | 26.78 |
| TraesCS5D01G190700.1 | Wheat | nucleus | 29.07 | 26.69 |
| TraesCS5A01G185700.1 | Wheat | nucleus | 29.71 | 26.65 |
| AT2G46400.1 | Thale cress | nucleus | 24.92 | 26.44 |
| TraesCS1B01G440500.1 | Wheat | nucleus | 22.04 | 26.44 |
| Zm00001d011496_P002 | Maize | nucleus | 27.48 | 26.3 |
| HORVU1Hr1G090130.4 | Barley | nucleus | 21.41 | 25.77 |
| HORVU0Hr1G012740.1 | Barley | nucleus | 26.52 | 25.7 |
| Zm00001d044010_P001 | Maize | nucleus | 27.48 | 25.67 |
| EER87882 | Sorghum | nucleus | 30.67 | 25.4 |
| Zm00001d020137_P001 | Maize | nucleus | 25.88 | 25.0 |
| TraesCS1A01G410600.1 | Wheat | nucleus | 18.21 | 24.46 |
| EER96590 | Sorghum | nucleus | 25.56 | 24.39 |
| Os09t0334500-01 | Rice | nucleus | 28.11 | 24.38 |
| Zm00001d036244_P001 | Maize | nucleus | 28.43 | 24.32 |
| Zm00001d045283_P001 | Maize | nucleus | 30.35 | 23.99 |
| HORVU5Hr1G056130.2 | Barley | nucleus | 30.03 | 23.98 |
| Os06t0158100-00 | Rice | nucleus | 29.71 | 23.79 |
| TraesCS7D01G110600.1 | Wheat | nucleus | 27.8 | 23.64 |
| Zm00001d005622_P001 | Maize | nucleus | 24.92 | 23.57 |
| TraesCS7B01G012600.1 | Wheat | nucleus | 27.48 | 23.18 |
| TraesCS7A01G116000.1 | Wheat | nucleus | 27.8 | 23.08 |
| HORVU0Hr1G012750.1 | Barley | nucleus | 24.28 | 22.89 |
| AT2G40740.3 | Thale cress | nucleus | 21.41 | 22.26 |
| Zm00001d009619_P002 | Maize | nucleus | 21.09 | 22.22 |
| AT3G56400.1 | Thale cress | nucleus | 19.49 | 20.75 |
| AT2G40750.1 | Thale cress | nucleus | 17.89 | 16.18 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | EntrezGene:826708 | ProteinID:AAC35548.1 | ProteinID:AEE82968.1 | ProteinID:AEE82969.1 |
| EMBL:AF442396 | ArrayExpress:AT4G11070 | EnsemblPlantsGene:AT4G11070 | RefSeq:AT4G11070 | TAIR:AT4G11070 | RefSeq:AT4G11070-TAIR-G |
| EnsemblPlants:AT4G11070.1 | TAIR:AT4G11070.1 | EMBL:AY133686 | EMBL:BT001107 | ProteinID:CAB43042.1 | ProteinID:CAB81208.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 |
| InterPro:IPR036576 | RefSeq:NP_192845.1 | RefSeq:NP_849358.1 | PFAM:PF03106 | PO:PO:0000293 | PFscan:PS50811 |
| PANTHER:PTHR32096 | PANTHER:PTHR32096:SF36 | UniProt:Q8H0Y8 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI000009E773 |
| Symbol:WRKY41 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : |
Description
WRKY41Probable WRKY transcription factor 41 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0Y8]
Coordinates
chr4:+:6759098..6760794
Molecular Weight (calculated)
34896.1 Da
IEP (calculated)
9.576
GRAVY (calculated)
-0.562
Length
313 amino acids
Sequence
(BLAST)
(BLAST)
001: MEMMNWERRS LLNELIHGLK AAKQLQGSSS PSLSASSSYL TTEIKENLLH NIVSSFKKAI LMLNGSTTQH NPTIELAPDP LAHPGKVPGS PASITGNPRS
101: EEFFNVRSKE FNLSSKKRKM LPKWTEQVRI SPERGLEGPH DDIFSWRKYG QKDILGAKFP RSYYRCTFRN TQYCWATKQV QRSDGDPTIF EVTYRGTHTC
201: SQGIPLPEKR ETKPKHTVAV NYQNLRASLT VRTGGLGSEA FSFPVTSPLY TYESINGGGT FYHHVGSSGP SDFTGLISTN TSTGSSPIFD VNFQFDPTAE
301: INTGFPTFFH NSI
101: EEFFNVRSKE FNLSSKKRKM LPKWTEQVRI SPERGLEGPH DDIFSWRKYG QKDILGAKFP RSYYRCTFRN TQYCWATKQV QRSDGDPTIF EVTYRGTHTC
201: SQGIPLPEKR ETKPKHTVAV NYQNLRASLT VRTGGLGSEA FSFPVTSPLY TYESINGGGT FYHHVGSSGP SDFTGLISTN TSTGSSPIFD VNFQFDPTAE
301: INTGFPTFFH NSI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.