Factsheet for Os01t0656400-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0267900-01
Os01t0279300-01
Os01t0810300-01
Os03t0262200-00
Os03t0319300-01
Os03t0703400-01
Os03t0743500-02
Os05t0491000-01
Os05t0491100-01
Os07t0687200-02
Os12t0603800-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G23810.1	Os01t0267900-01	AT2G41090.1	17360592
AT4G23810.1	Os01t0279300-01	AT2G41090.1	17360592
AT4G23810.1	Os01t0810300-01	AT2G41090.1	17360592
AT4G23810.1	Os03t0319300-01	AT2G41090.1	17360592
AT4G23810.1	Os05t0491000-01	AT2G41090.1	17360592
AT4G23810.1	Os05t0491100-01	AT2G41090.1	17360592
AT4G23810.1	Os07t0687200-02	AT2G41090.1	17360592
AT4G23810.1	Os12t0603800-00	AT2G41090.1	17360592
AT4G23810.1	Os01t0267900-01	AT2G41100.1	17360592
AT4G23810.1	Os01t0279300-01	AT2G41100.1	17360592
AT4G23810.1	Os01t0810300-01	AT2G41100.1	17360592
AT4G23810.1	Os03t0319300-01	AT2G41100.1	17360592
AT4G23810.1	Os05t0491000-01	AT2G41100.1	17360592
AT4G23810.1	Os05t0491100-01	AT2G41100.1	17360592
AT4G23810.1	Os07t0687200-02	AT2G41100.1	17360592
AT4G23810.1	Os12t0603800-00	AT2G41100.1	17360592
AT4G23810.1	Os03t0262200-00	AT4G08500.1	17587183
AT4G23810.1	Os03t0703400-01	AT4G08500.1	17587183
AT4G23810.1	Os03t0743500-02	AT4G14640.1	17360592
AT4G23810.1	Os01t0267900-01	AT5G21274.1	17360592
AT4G23810.1	Os01t0279300-01	AT5G21274.1	17360592
AT4G23810.1	Os01t0810300-01	AT5G21274.1	17360592
AT4G23810.1	Os03t0319300-01	AT5G21274.1	17360592
AT4G23810.1	Os05t0491000-01	AT5G21274.1	17360592
AT4G23810.1	Os05t0491100-01	AT5G21274.1	17360592
AT4G23810.1	Os07t0687200-02	AT5G21274.1	17360592
AT4G23810.1	Os12t0603800-00	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G059220.1	Barley	nucleus	58.76	52.27
HORVU3Hr1G059210.1	Barley	nucleus	45.99	51.64
TraesCS3D01G238300.1	Wheat	nucleus	54.74	51.55
Zm00001d011496_P002	Maize	nucleus	56.57	47.4
EES03370	Sorghum	nucleus	58.03	45.95
Zm00001d044010_P001	Maize	nucleus	51.46	42.09
Os05t0571200-01	Rice	nucleus	41.97	41.52
GSMUA_Achr3P15840_001	Banana	nucleus	31.02	34.14
Os11t0685700-00	Rice	nucleus	22.63	32.29
VIT_15s0046g01140.t01	Wine grape	nucleus	33.58	28.48
GSMUA_Achr3P25080_001	Banana	nucleus	33.94	28.01
Os08t0386200-01	Rice	nucleus	32.12	27.59
Solyc10g009550.2.1	Tomato	nucleus	28.47	26.9
PGSC0003DMT400031695	Potato	nucleus	33.21	26.84
Solyc08g082110.2.1	Tomato	nucleus	32.85	26.55
VIT_02s0025g01280.t01	Wine grape	nucleus	32.85	26.32
AT4G23810.1	Thale cress	nucleus	30.29	25.62
Bra019265.1-P	Field mustard	nucleus	29.93	25.39
PGSC0003DMT400051194	Potato	nucleus	26.64	25.17
CDY65042	Canola	nucleus	30.29	25.15
PGSC0003DMT400014949	Potato	nucleus	32.85	25.0
Bra013732.1-P	Field mustard	nucleus	28.83	25.0
VIT_16s0050g02510.t01	Wine grape	nucleus	33.21	25.0
AT4G11070.1	Thale cress	nucleus	28.47	24.92
CDY25271	Canola	nucleus	29.93	24.77
Bra033158.1-P	Field mustard	nucleus	29.93	24.77
CDY03518	Canola	nucleus	28.47	24.76
CDY47621	Canola	nucleus	28.47	24.68
Solyc08g008280.2.1	Tomato	nucleus	32.12	24.44
CDX94221	Canola	nucleus	28.47	24.3
KRH68901	Soybean	nucleus	31.75	24.03
CDY10969	Canola	nucleus	28.1	23.84
KRH53440	Soybean	nucleus	31.39	23.63
KRG97154	Soybean	nucleus	31.02	23.48
KRH41300	Soybean	nucleus	30.66	23.4
KRH60029	Soybean	nucleus	30.66	23.14
KRH64503	Soybean	nucleus	30.29	22.8
Os09t0334500-01	Rice	nucleus	29.93	22.71
KRH77637	Soybean	nucleus	26.64	22.67
Solyc05g050300.1.1	Tomato	nucleus	16.06	22.56
Bra026467.1-P	Field mustard	nucleus	25.55	22.44
CDY19847	Canola	nucleus	25.18	22.12
CDX87141	Canola	nucleus	25.18	22.12
AT5G24110.1	Thale cress	nucleus	24.45	22.11
CDX95699	Canola	nucleus	22.99	22.11
Bra000423.1-P	Field mustard	nucleus	22.63	22.06
CDX80414	Canola	nucleus	25.18	22.04
AT2G46400.1	Thale cress	nucleus	23.72	22.03
KRH06499	Soybean	nucleus	29.93	21.98
PGSC0003DMT400000599	Potato	nucleus	27.74	21.97
KRH47935	Soybean	nucleus	29.56	21.95
CDY42043	Canola	nucleus	23.36	21.84
Solyc03g007380.1.1	Tomato	nucleus	28.1	21.81
Bra004540.1-P	Field mustard	nucleus	22.63	21.75
Os06t0158100-00	Rice	nucleus	31.02	21.74
PGSC0003DMT400023502	Potato	nucleus	28.1	21.63
CDX80015	Canola	nucleus	23.36	21.62
CDX88077	Canola	nucleus	24.45	21.41
Bra009734.1-P	Field mustard	nucleus	24.45	21.41
CDX83367	Canola	nucleus	21.53	21.22
CDX89127	Canola	nucleus	21.17	20.94
Bra014426.1-P	Field mustard	nucleus	21.17	20.94
Solyc01g095630.2.1	Tomato	nucleus	25.18	20.54
Os01t0821600-01	Rice	nucleus	19.71	19.29
Solyc05g050330.2.1	Tomato	nucleus	16.79	18.85
PGSC0003DMT400084227	Potato	nucleus	19.71	18.37
PGSC0003DMT400046351	Potato	nucleus	19.71	17.94
PGSC0003DMT400084214	Potato	nucleus	21.17	17.52
Os05t0478800-00	Rice	nucleus	14.23	17.49
Os05t0322900-01	Rice	nucleus	20.8	17.48
Solyc05g050340.2.1	Tomato	nucleus	20.44	17.13
Os01t0820400-01	Rice	nucleus	16.42	16.98
Os07t0680400-01	Rice	nucleus	20.44	16.82
Os12t0116400-00	Rice	nucleus	13.5	16.67
Os03t0321700-01	Rice	nucleus	12.77	16.67
Os01t0820700-00	Rice	nucleus	17.15	16.61
Os11t0116900-01	Rice	nucleus	13.5	16.52
Os05t0478700-00	Rice	nucleus	16.79	16.43
Os03t0335200-01	Rice	nucleus	18.61	16.19
Os05t0478400-00	Rice	nucleus	18.98	14.53
Os05t0321900-01	Rice	nucleus	20.44	13.08
Os01t0821300-01	Rice	cytosol, nucleus	8.39	12.17
CDX80415	Canola	nucleus	6.57	12.16
Solyc05g050310.1.1	Tomato	cytosol, nucleus	2.55	11.86
Os11t0116600-00	Rice	nucleus	4.01	6.21

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	ProteinID:BAF05669.1	ProteinID:BAS73504.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043531	GO:GO:0043565	InterPro:IPR003657
InterPro:IPR036576	EnsemblPlantsGene:Os01g0656400	EnsemblPlants:Os01t0656400-00	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR32096
PANTHER:PTHR32096:SF52	UniProt:Q0JKQ9	SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI00004026DA	InterPro:WRKY_dom
InterPro:WRKY_dom_sf	SEG:seg	:	:	:	:

Description

WRKY GENE 15Similar to WRKY transcription factor 15. (Os01t0656400-00)

Coordinates

chr1:-:26687377..26688416

Molecular Weight (calculated)

29057.8 Da

IEP (calculated)

7.416

GRAVY (calculated)

-0.400

Length

274 amino acids

Sequence
(BLAST)

001: MAAGADERCR ALVSGLLSSI DRSISIARSC CTEAAAAGRL TQQAGAAPES PPSADGSAGS DLGADSRCRA NAAGPCKKRK TLPKWSKQVK VRSVQDVGPL
101: DDGFSWRKYG QKDILGAKYP RAYFRCTHRH TQGCHASKQV QRADGDPLLF DVVYHGDHTC AHGVRSAAAA IDGQAAASAE QKHQPTPPQE QNAVSVAFTS
201: MAVVNASTSS PFVSPAMSDC QISYELGGGS MAGVRNVPDV ELASKTNSSM GDDMEFMFSL DSDFLDTYKY SSYF

Best Arabidopsis Sequence Match ( AT4G23810.1 )
(BLAST)

001: MEGRDMLSWE QKTLLSELIN GFDAAKKLQA RLREAPSPSS SFSSPATAVA ETNEILVKQI VSSYERSLLL LNWSSSPSVQ LIPTPVTVVP VANPGSVPES
101: PASINGSPRS EEFADGGGSS ESHHRQDYIF NSKKRKMLPK WSEKVRISPE RGLEGPQDDV FSWRKYGQKD ILGAKFPRSY YRCTHRSTQN CWATKQVQRS
201: DGDATVFEVT YRGTHTCSQA ITRTPPLASP EKRQDTRVKP AITQKPKDIL ESLKSNLTVR TDGLDDGKDV FSFPDTPPFY NYGTINGEFG HVESSPIFDV
301: VDWFNPTVEI DTTFPAFLHE SIYY

Arabidopsis Description

WRKY53Probable WRKY transcription factor 53 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUP6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.