Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| nucleus:
24133045
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0321700-01 | Rice | nucleus | 7.34 | 6.19 |
| Os05t0478700-00 | Rice | nucleus | 9.6 | 6.07 |
| Os05t0478800-00 | Rice | nucleus | 6.78 | 5.38 |
| Os11t0685700-00 | Rice | nucleus | 5.65 | 5.21 |
| Os12t0116400-00 | Rice | nucleus | 6.21 | 4.95 |
| Os11t0116900-01 | Rice | nucleus | 6.21 | 4.91 |
| Os07t0680400-01 | Rice | nucleus | 8.47 | 4.5 |
| Os05t0571200-01 | Rice | nucleus | 6.78 | 4.33 |
| Os05t0322900-01 | Rice | nucleus | 7.91 | 4.29 |
| Os01t0656400-00 | Rice | nucleus | 6.21 | 4.01 |
| Os01t0820400-01 | Rice | nucleus | 5.65 | 3.77 |
| Os01t0821300-01 | Rice | cytosol, nucleus | 3.95 | 3.7 |
| Os06t0158100-00 | Rice | nucleus | 7.91 | 3.58 |
| Os03t0335200-01 | Rice | nucleus | 6.21 | 3.49 |
| Os08t0386200-01 | Rice | nucleus | 6.21 | 3.45 |
| OQU88981 | Sorghum | plastid | 5.08 | 3.27 |
| Os01t0820700-00 | Rice | nucleus | 5.08 | 3.18 |
| Os09t0334500-01 | Rice | nucleus | 6.21 | 3.05 |
| Os01t0821600-01 | Rice | nucleus | 4.52 | 2.86 |
| Os05t0321900-01 | Rice | nucleus | 6.78 | 2.8 |
| Os05t0478400-00 | Rice | nucleus | 4.52 | 2.23 |
Protein Annotations
| MapMan:35.2 | UniProt:A0A0P0XYN6 | ProteinID:BAT12417.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:Os11g0116600 | EnsemblPlants:Os11t0116600-00 | UniParc:UPI000393A4D6 | SEG:seg |
Description
WRKY GENE 52Conserved hypothetical protein. (Os11t0116600-00)
Coordinates
chr11:-:750013..750897
Molecular Weight (calculated)
20052.3 Da
IEP (calculated)
4.591
GRAVY (calculated)
-0.725
Length
177 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLESQEDHH RPPKEEGLMV RSTSRRHGLN SRPCLMRMAF SGENMERRRS RALTSQALHN LTANPNGHHD SDDDDTIFTK MIKQEEQAAW LPPPPPADLA
101: TISNNFDETP GLHVCQEVPP SSSNSSVISH YADEFDHHQM LETTVMEEAL GLGADLDDPY FYDPNLLLIY ESLMNCY
101: TISNNFDETP GLHVCQEVPP SSSNSSVISH YADEFDHHQM LETTVMEEAL GLGADLDDPY FYDPNLLLIY ESLMNCY
001: MIQNAMSSYY NPSAATTLVS IDSDEQRRIK YLADLNMIAT QRHSSTDGPM AILWDMENCP VPSDVRPEDV ASNIRMAIQL HPVISGPVVN FSAYGDFNGF
101: PRRVREGCQR TGVKLIDVPN GRKDASDKAI LIDMFLFVLD NKPPATIVLV SGDVDFAPAL HILGQRGYTV ILVIPSSVYV NSALSNAGKF VWDWHSIVHG
201: EGFVPRCKPR VVPYLMGCNI GDNSNMDGLN EDETILYRGH LESTMWVAPG DLNGLKGQLV KLLELSGGCI PLMRVPSEYQ RKFSKPLFVS DYGVAKLVDL
301: FKKMSDVIVV DGKGNKRFVY LRNSKPNIIS PSSPVVLLRR ERKGKEPNGV TTNGGVSSDE MSDTGSVQSE RNLEEFKFEL QDILVSYCCQ VQMDCFEAIY
401: KLRYKRPLAY TNMGVNHLEQ LFDKLRDVVA IHEDPATGRK LISPV
101: PRRVREGCQR TGVKLIDVPN GRKDASDKAI LIDMFLFVLD NKPPATIVLV SGDVDFAPAL HILGQRGYTV ILVIPSSVYV NSALSNAGKF VWDWHSIVHG
201: EGFVPRCKPR VVPYLMGCNI GDNSNMDGLN EDETILYRGH LESTMWVAPG DLNGLKGQLV KLLELSGGCI PLMRVPSEYQ RKFSKPLFVS DYGVAKLVDL
301: FKKMSDVIVV DGKGNKRFVY LRNSKPNIIS PSSPVVLLRR ERKGKEPNGV TTNGGVSSDE MSDTGSVQSE RNLEEFKFEL QDILVSYCCQ VQMDCFEAIY
401: KLRYKRPLAY TNMGVNHLEQ LFDKLRDVVA IHEDPATGRK LISPV
Arabidopsis Description
At2g15560 [Source:UniProtKB/TrEMBL;Acc:Q6NQ97]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.