Factsheet for HORVU1Hr1G090190.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	nucleus
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G001280.1
HORVU2Hr1G016740.4
HORVU3Hr1G038010.1
HORVU3Hr1G079210.4
HORVU4Hr1G006660.1
HORVU4Hr1G026290.3
HORVU4Hr1G061550.1
HORVU5Hr1G014060.1
HORVU5Hr1G014070.2
HORVU5Hr1G044710.4
HORVU6Hr1G079810.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G23810.1	HORVU0Hr1G001280.1	AT2G41090.1	17360592
AT4G23810.1	HORVU2Hr1G016740.4	AT2G41090.1	17360592
AT4G23810.1	HORVU3Hr1G038010.1	AT2G41090.1	17360592
AT4G23810.1	HORVU3Hr1G079210.4	AT2G41090.1	17360592
AT4G23810.1	HORVU4Hr1G026290.3	AT2G41090.1	17360592
AT4G23810.1	HORVU5Hr1G014060.1	AT2G41090.1	17360592
AT4G23810.1	HORVU5Hr1G014070.2	AT2G41090.1	17360592
AT4G23810.1	HORVU5Hr1G044710.4	AT2G41090.1	17360592
AT4G23810.1	HORVU0Hr1G001280.1	AT2G41100.1	17360592
AT4G23810.1	HORVU2Hr1G016740.4	AT2G41100.1	17360592
AT4G23810.1	HORVU3Hr1G038010.1	AT2G41100.1	17360592
AT4G23810.1	HORVU3Hr1G079210.4	AT2G41100.1	17360592
AT4G23810.1	HORVU4Hr1G026290.3	AT2G41100.1	17360592
AT4G23810.1	HORVU5Hr1G014060.1	AT2G41100.1	17360592
AT4G23810.1	HORVU5Hr1G014070.2	AT2G41100.1	17360592
AT4G23810.1	HORVU5Hr1G044710.4	AT2G41100.1	17360592
AT4G23810.1	HORVU4Hr1G006660.1	AT4G08500.1	17587183
AT4G23810.1	HORVU4Hr1G061550.1	AT4G08500.1	17587183
AT4G23810.1	HORVU6Hr1G079810.1	AT4G08500.1	17587183
AT4G23810.1	HORVU0Hr1G001280.1	AT5G21274.1	17360592
AT4G23810.1	HORVU2Hr1G016740.4	AT5G21274.1	17360592
AT4G23810.1	HORVU3Hr1G038010.1	AT5G21274.1	17360592
AT4G23810.1	HORVU3Hr1G079210.4	AT5G21274.1	17360592
AT4G23810.1	HORVU4Hr1G026290.3	AT5G21274.1	17360592
AT4G23810.1	HORVU5Hr1G014060.1	AT5G21274.1	17360592
AT4G23810.1	HORVU5Hr1G014070.2	AT5G21274.1	17360592
AT4G23810.1	HORVU5Hr1G044710.4	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G440700.1	Wheat	nucleus	84.25	88.8
TraesCS1D01G418600.1	Wheat	nucleus	83.46	85.83
TraesCS1A01G410700.1	Wheat	nucleus	81.89	84.21
HORVU1Hr1G090170.1	Barley	nucleus	76.38	78.54
HORVU1Hr1G090130.4	Barley	nucleus	77.95	76.15
HORVU1Hr1G090110.1	Barley	nucleus	71.65	71.94
Os05t0571200-01	Rice	nucleus	54.72	50.18
EES18716	Sorghum	nucleus	50.39	47.06
Zm00001d009619_P002	Maize	nucleus	50.79	43.43
HORVU3Hr1G059210.1	Barley	nucleus	35.83	37.3
HORVU3Hr1G059220.1	Barley	nucleus	42.52	35.06
HORVU2Hr1G029430.2	Barley	mitochondrion, nucleus	27.56	28.69
GSMUA_Achr3P15840_001	Banana	nucleus	27.17	27.71
GSMUA_Achr3P25080_001	Banana	nucleus	34.65	26.51
VIT_15s0046g01140.t01	Wine grape	nucleus	33.07	26.01
HORVU4Hr1G051970.1	Barley	nucleus	12.2	24.8
HORVU5Hr1G034830.3	Barley	nucleus	31.5	24.1
CDX94221	Canola	nucleus	29.53	23.36
VIT_16s0050g02510.t01	Wine grape	nucleus	33.46	23.35
Bra019265.1-P	Field mustard	nucleus	29.53	23.22
CDY03518	Canola	nucleus	28.74	23.17
AT4G23810.1	Thale cress	nucleus	29.53	23.15
CDY47621	Canola	nucleus	28.74	23.1
Bra013732.1-P	Field mustard	nucleus	28.74	23.1
CDY10969	Canola	nucleus	29.13	22.91
HORVU0Hr1G012740.1	Barley	nucleus	28.35	22.29
KRH41300	Soybean	nucleus	31.5	22.28
VIT_02s0025g01280.t01	Wine grape	nucleus	29.92	22.22
Solyc03g007380.1.1	Tomato	nucleus	30.71	22.1
HORVU3Hr1G058670.1	Barley	nucleus	21.65	22.09
AT4G11070.1	Thale cress	nucleus	27.17	22.04
CDY65042	Canola	nucleus	28.35	21.82
CDX87141	Canola	nucleus	26.77	21.79
Bra026467.1-P	Field mustard	nucleus	26.77	21.79
Solyc10g009550.2.1	Tomato	nucleus	24.8	21.72
Solyc05g050330.2.1	Tomato	nucleus	20.87	21.72
HORVU6Hr1G013890.3	Barley	nucleus	18.9	21.72
KRH53440	Soybean	nucleus	31.1	21.7
KRH60029	Soybean	nucleus	30.71	21.49
CDY19847	Canola	nucleus	26.38	21.47
CDY25271	Canola	nucleus	27.95	21.45
Bra033158.1-P	Field mustard	nucleus	27.95	21.45
KRH64503	Soybean	nucleus	30.71	21.43
KRH77637	Soybean	nucleus	27.17	21.43
CDX80414	Canola	nucleus	26.38	21.41
Bra000423.1-P	Field mustard	nucleus	23.62	21.35
PGSC0003DMT400023502	Potato	nucleus	29.92	21.35
Solyc08g082110.2.1	Tomato	nucleus	28.35	21.24
PGSC0003DMT400031695	Potato	nucleus	28.35	21.24
HORVU3Hr1G080980.1	Barley	nucleus	20.47	21.22
HORVU5Hr1G056130.2	Barley	nucleus	32.68	21.17
AT5G24110.1	Thale cress	nucleus	25.2	21.12
CDX88077	Canola	nucleus	25.98	21.09
Bra009734.1-P	Field mustard	nucleus	25.98	21.09
PGSC0003DMT400051194	Potato	nucleus	24.02	21.03
CDX83367	Canola	nucleus	22.83	20.86
KRH68901	Soybean	nucleus	29.53	20.72
KRG97154	Soybean	nucleus	29.53	20.72
CDX95699	Canola	nucleus	22.83	20.35
Bra004540.1-P	Field mustard	nucleus	22.83	20.35
CDY42043	Canola	nucleus	23.23	20.14
AT2G46400.1	Thale cress	nucleus	23.23	20.0
CDX80015	Canola	nucleus	23.23	19.93
Solyc01g095630.2.1	Tomato	nucleus	25.98	19.64
HORVU0Hr1G012750.1	Barley	nucleus	25.59	19.58
PGSC0003DMT400014949	Potato	nucleus	27.56	19.44
HORVU4Hr1G052010.2	Barley	nucleus	15.75	19.42
Solyc08g008280.2.1	Tomato	nucleus	27.17	19.17
HORVU3Hr1G080860.1	Barley	nucleus	19.29	19.14
PGSC0003DMT400000599	Potato	nucleus	25.98	19.08
KRH06499	Soybean	nucleus	27.95	19.03
HORVU1Hr1G069620.7	Barley	nucleus	22.44	19.0
Solyc05g050300.1.1	Tomato	nucleus	14.57	18.97
Bra014426.1-P	Field mustard	nucleus	20.47	18.77
CDX89127	Canola	nucleus	20.47	18.77
KRH47935	Soybean	nucleus	27.17	18.7
PGSC0003DMT400046351	Potato	nucleus	22.05	18.6
PGSC0003DMT400084227	Potato	nucleus	20.87	18.03
PGSC0003DMT400084214	Potato	nucleus	22.44	17.22
HORVU0Hr1G030830.1	Barley	nucleus, plastid	18.9	17.14
Solyc05g050310.1.1	Tomato	cytosol, nucleus	3.94	16.95
HORVU3Hr1G081030.3	Barley	nucleus	21.26	16.88
Solyc05g050340.2.1	Tomato	nucleus	21.65	16.82
HORVU4Hr1G050320.2	Barley	nucleus	19.68	16.78
HORVU7Hr1G083270.2	Barley	nucleus	20.08	16.56
HORVU2Hr1G006600.1	Barley	nucleus	20.47	16.2
HORVU7Hr1G075960.1	Barley	nucleus, plastid	18.11	15.7
HORVU3Hr1G081000.3	Barley	plastid	12.2	15.66
HORVU3Hr1G080890.1	Barley	nucleus, plastid, vacuole	18.11	15.65
HORVU2Hr1G017740.3	Barley	nucleus	21.26	15.52
HORVU2Hr1G109330.1	Barley	mitochondrion, nucleus, vacuole	19.68	15.38
HORVU2Hr1G017720.1	Barley	nucleus, plastid	22.05	15.22
HORVU4Hr1G022970.2	Barley	nucleus, plastid	16.14	14.7
HORVU1Hr1G069640.2	Barley	nucleus	16.54	14.33
HORVU1Hr1G069610.1	Barley	nucleus	15.75	13.84
HORVU3Hr1G080960.1	Barley	nucleus	19.29	13.61
HORVU0Hr1G023420.1	Barley	nucleus, plastid	15.75	12.82
CDX80415	Canola	nucleus	6.3	10.81

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EMBL:AK369804	UniProt:F2E0Y3	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	EnsemblPlantsGene:HORVU1Hr1G090190	EnsemblPlants:HORVU1Hr1G090190.2	InterPro:IPR003657
InterPro:IPR036576	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR32096	PANTHER:PTHR32096:SF20	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI000200780A	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2E0Y3]

Coordinates

chrchr1H:+:545513604..545516893

Molecular Weight (calculated)

26680.2 Da

IEP (calculated)

5.870

GRAVY (calculated)

-0.333

Length

254 amino acids

Sequence
(BLAST)

001: MEGTTATLAS ELDGLLAMAR ELEARVDGDQ GAPGAARELC AELAASVDRA VRLAGSGGNA GGRACVNGRL RSGRNAAAVR AQVRVASMHD LGPLDDGLSW
101: RKYGQKDILG ATYPRAYFRC THRHSQGCQA TKQVQRAHAD PLLFDVVYHG AHTCAQAAAA LAGPEHQPPA AFGLEQQQQS SPPAAPQGIQ WPAEPMTPPS
201: FPSSPAGCYT PASSWCQLTG GYGYAAGGGL GADMEFDELF WNTPGFFEPE VQNL

Best Arabidopsis Sequence Match ( AT4G23810.1 )
(BLAST)

001: MEGRDMLSWE QKTLLSELIN GFDAAKKLQA RLREAPSPSS SFSSPATAVA ETNEILVKQI VSSYERSLLL LNWSSSPSVQ LIPTPVTVVP VANPGSVPES
101: PASINGSPRS EEFADGGGSS ESHHRQDYIF NSKKRKMLPK WSEKVRISPE RGLEGPQDDV FSWRKYGQKD ILGAKFPRSY YRCTHRSTQN CWATKQVQRS
201: DGDATVFEVT YRGTHTCSQA ITRTPPLASP EKRQDTRVKP AITQKPKDIL ESLKSNLTVR TDGLDDGKDV FSFPDTPPFY NYGTINGEFG HVESSPIFDV
301: VDWFNPTVEI DTTFPAFLHE SIYY

Arabidopsis Description

WRKY53Probable WRKY transcription factor 53 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUP6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.