Factsheet for HORVU6Hr1G079810.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 3
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G012740.1
HORVU0Hr1G012750.1
HORVU1Hr1G049500.2
HORVU1Hr1G090110.1
HORVU1Hr1G090130.4
HORVU1Hr1G090170.1
HORVU1Hr1G090190.2
HORVU2Hr1G029430.2
HORVU3Hr1G058670.1
HORVU3Hr1G059210.1
HORVU3Hr1G059220.1
HORVU5Hr1G034830.3
HORVU5Hr1G056130.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G08480.1	HORVU1Hr1G049500.2	AT4G01370.1	22643122
AT4G08500.1	HORVU0Hr1G012740.1	AT4G23810.1	17587183
AT4G08500.1	HORVU0Hr1G012750.1	AT4G23810.1	17587183
AT4G08500.1	HORVU1Hr1G090110.1	AT4G23810.1	17587183
AT4G08500.1	HORVU1Hr1G090130.4	AT4G23810.1	17587183
AT4G08500.1	HORVU1Hr1G090170.1	AT4G23810.1	17587183
AT4G08500.1	HORVU1Hr1G090190.2	AT4G23810.1	17587183
AT4G08500.1	HORVU2Hr1G029430.2	AT4G23810.1	17587183
AT4G08500.1	HORVU3Hr1G058670.1	AT4G23810.1	17587183
AT4G08500.1	HORVU3Hr1G059210.1	AT4G23810.1	17587183
AT4G08500.1	HORVU3Hr1G059220.1	AT4G23810.1	17587183
AT4G08500.1	HORVU5Hr1G034830.3	AT4G23810.1	17587183
AT4G08500.1	HORVU5Hr1G056130.2	AT4G23810.1	17587183

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G327500.1	Wheat	mitochondrion	72.54	91.63
TraesCS6D01G307100.1	Wheat	cytosol	90.72	91.59
TraesCS6B01G358800.1	Wheat	cytosol	90.53	91.4
OQU85800	Sorghum	mitochondrion	69.89	71.1
Zm00001d052147_P001	Maize	cytosol	68.37	68.76
PGSC0003DMT400067237	Potato	cytosol	33.33	60.48
Bra039693.1-P	Field mustard	cytosol	30.49	58.76
VIT_12s0142g00700.t01	Wine grape	cytosol	28.03	56.06
CDY36607	Canola	cytosol	31.82	51.06
VIT_12s0034g00750.t01	Wine grape	cytosol	30.11	50.8
CDY24072	Canola	cytosol	33.9	50.28
KRH10459	Soybean	cytosol	40.91	49.09
CDY18020	Canola	cytosol	7.2	48.72
KRH42244	Soybean	cytosol	39.02	43.83
VIT_12s0034g00240.t01	Wine grape	nucleus	34.66	43.36
KRH53173	Soybean	nucleus	44.89	42.7
KRH58364	Soybean	cytosol, plastid	39.96	42.2
KRH64744	Soybean	nucleus	45.08	42.05
GSMUA_Achr10P...	Banana	cytosol	43.56	40.71
VIT_18s0001g03960.t01	Wine grape	mitochondrion, nucleus	43.56	40.56
Bra000647.1-P	Field mustard	cytosol	41.1	40.11
CDY34000	Canola	cytosol	41.29	39.64
CDY69517	Canola	cytosol	41.1	39.53
KRH16614	Soybean	mitochondrion	40.53	38.7
KRH16616	Soybean	nucleus	42.8	38.31
KRH18819	Soybean	nucleus	42.61	37.88
Solyc07g053170.2.1	Tomato	cytosol	42.42	37.27
CDY36198	Canola	cytosol	40.15	36.87
AT4G08500.1	Thale cress	cytosol, mitochondrion	41.67	36.18
HORVU4Hr1G006660.1	Barley	plastid	45.08	35.95
Bra037860.1-P	Field mustard	cytosol	40.15	35.39
KRH10458	Soybean	cytosol	31.63	35.38
Solyc01g104530.2.1	Tomato	nucleus	44.51	35.34
PGSC0003DMT400061014	Potato	mitochondrion	44.51	35.29
CDX75154	Canola	cytosol	39.96	34.88
HORVU4Hr1G061550.1	Barley	cytosol, plastid	43.94	33.57
AT4G08470.1	Thale cress	cytosol	33.9	31.96
HORVU1Hr1G078750.1	Barley	mitochondrion	16.1	29.21
AT4G08480.1	Thale cress	cytosol, plastid	40.34	27.55
HORVU1Hr1G078760.1	Barley	cytosol	13.64	26.67
HORVU2Hr1G062700.17	Barley	cytosol	24.05	26.29
CDY18021	Canola	nucleus	19.32	24.88
HORVU1Hr1G078790.1	Barley	mitochondrion	17.61	22.52
HORVU0Hr1G030380.1	Barley	vacuole	14.77	22.1
HORVU4Hr1G056120.2	Barley	mitochondrion, plasma membrane, vacuole	18.94	20.75
HORVU3Hr1G065630.1	Barley	cytosol, plasma membrane	18.37	20.68
HORVU1Hr1G078860.3	Barley	plastid	15.72	20.54
HORVU4Hr1G017100.3	Barley	cytosol, mitochondrion, nucleus	25.0	19.88
HORVU0Hr1G030360.1	Barley	mitochondrion	17.42	19.57
HORVU3Hr1G065640.1	Barley	plastid	17.99	19.39
HORVU1Hr1G078720.4	Barley	mitochondrion	17.61	19.38
HORVU0Hr1G038670.2	Barley	plastid	16.48	19.16
HORVU3Hr1G065620.1	Barley	cytosol	18.56	19.03
HORVU6Hr1G064150.1	Barley	cytosol	29.36	17.65
HORVU2Hr1G076510.2	Barley	cytosol	24.62	17.26
HORVU5Hr1G097530.9	Barley	mitochondrion, plastid	25.76	17.24
HORVU1Hr1G078710.3	Barley	cytosol	17.61	17.19
HORVU6Hr1G002500.1	Barley	plastid	13.26	17.11
HORVU5Hr1G059840.4	Barley	cytosol	19.7	16.88
HORVU2Hr1G096350.1	Barley	cytosol	28.22	16.76
HORVU2Hr1G110900.7	Barley	cytosol	20.64	8.19

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.2.2	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:HORVU6Hr1G079810
EnsemblPlants:HORVU6Hr1G079810.1	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0WIU2	PFAM:PF00069	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24361	PANTHER:PTHR24361:SF489	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002967ECC	SEG:seg	:

Description

No Description!

Coordinates

chrchr6H:+:539072159..539076953

Molecular Weight (calculated)

57130.6 Da

IEP (calculated)

6.524

GRAVY (calculated)

-0.338

Length

528 amino acids

Sequence
(BLAST)

001: MGTPQRPRQL ARTNAMRNSS YSADAGADGD DDLAAYGGIQ LSVDRAARGG GPGYGSQTSF RIRGGRGGAE EVAELFRQLG LSGPEDFAIP PAVYAAAMSH
101: LPNAAQRRRA SLEESSLAAS PSGTPEISGR DVVVATRLQP AGDGEGAGLA TELVQSETIQ VSAKAYQRPW AESKAILVES ERVETSGSTT REAIASSKPD
201: NAGEEKGGGK LAKVETLREG RTREVLVEAT RGATGGGILA LVVAESTSCD IEHLIWPSPN RRFRRTITSW IKGEHIGSGS FGSVYEAISD DGFFFAVKEV
301: SLLDQGINAK QRIVQLEHEV SLLSRLEHDN IVQYYGTDKE DGKLYIFLEL VTQGSLAALY QKYCLQDSQV SAYTRQILNG LNYLHQRNVL HRDIKCANIL
401: VDANGLVKLA DFGLAKEMSI LSQARSSKGT IFWMAPEVAK AKPHGPPADI WSLGCTVLEM LTGKVPYPDM EWTQALLKIG RGIPPKIPST LSEDARDFIT
501: RCVQSNQNDR PSAAQLLEHP FVQRPLQH

Best Arabidopsis Sequence Match ( AT4G08500.1 )
(BLAST)

001: MDRILARMKK STGRRGGDKN ITPVRRLERR DAARNINYDA ASCSSSSAED LSVSTSSLMT RSLEFPEPTS FRIGGGVGEM DRIYRSLGVS GPDDLAISFD
101: AWEACKKRSS SDVVNRFKSF DLDKVRDQDL SEEGPSGVVV GSDSMNHKVQ GQDLSEAGPS GGIVTELSEI GNLITPVDRL VADGVVENRR VMERTPTIVK
201: SKGYLVPNNV VAVGVGVGGG IKGLRPPVLK PPPAMKRPPI DHRGSSWDFL THFAPSETVK RPSSSSSSSE DGCDEEEGKE EEAEAEEMGA RFIQLGDTAD
301: ETCSFTTNEG DSSSTVSNTS PIYPDGGAII TSWQKGQLLG RGSFGSVYEG ISGDGDFFAV KEVSLLDQGS QAQECIQQLE GEIKLLSQLQ HQNIVRYRGT
401: AKDGSNLYIF LELVTQGSLL KLYQRYQLRD SVVSLYTRQI LDGLKYLHDK GFIHRDIKCA NILVDANGAV KLADFGLAKV SKFNDIKSCK GTPFWMAPEV
501: INRKDSDGYG SPADIWSLGC TVLEMCTGQI PYSDLEPVQA LFRIGRGTLP EVPDTLSLDA RLFILKCLKV NPEERPTAAE LLNHPFVRRP LPSVGSGGSG
601: SASPLLRR

Arabidopsis Description

MEKK1Mitogen-activated protein kinase kinase kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q39008]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.